RNA–Protein interactions for RNA: ENST00000486509.1

CDC7-204, Transcript of cell division cycle 7, humanhuman

TSL 3

Gene CDC7, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-204ENST00000486509 MAPKBP1O60336 1514 aa6.41□□□□□ -1.38
CDC7-204ENST00000486509 ERCC6L2Q5T890 1561 aa6.41□□□□□ -1.38
CDC7-204ENST00000486509 GRIN3BO60391 1043 aa6.41□□□□□ -1.38
CDC7-204ENST00000486509 PLCG1P19174 1290 aa6.41□□□□□ -1.38
CDC7-204ENST00000486509 ZNF394Q53GI3 561 aa6.41□□□□□ -1.38
CDC7-204ENST00000486509 TMEM201Q5SNT2 666 aa6.41□□□□□ -1.38
CDC7-204ENST00000486509 SLC6A19Q695T7 634 aa6.41□□□□□ -1.38
CDC7-204ENST00000486509 XAGE3Q8WTP9 111 aa6.41□□□□□ -1.38
CDC7-204ENST00000486509 RNF34Q969K3 372 aa6.41□□□□□ -1.38
CDC7-204ENST00000486509 MKNK2Q9HBH9 465 aa6.41□□□□□ -1.38
CDC7-204ENST00000486509 BSDC1Q9NW68 430 aaPredicted RBP6.41□□□□□ -1.38
CDC7-204ENST00000486509 UBP1Q9NZI7 540 aa6.41□□□□□ -1.38
CDC7-204ENST00000486509 CCDC39Q9UFE4 941 aa6.41□□□□□ -1.38
CDC7-204ENST00000486509 PLAGL2Q9UPG8 496 aa6.41□□□□□ -1.38
CDC7-204ENST00000486509 ROBO2Q9HCK4 1378 aa6.41□□□□□ -1.38
CDC7-204ENST00000486509 ABCA5Q8WWZ7 1642 aa6.4□□□□□ -1.38
CDC7-204ENST00000486509 UPK3BL1B0FP48 263 aa6.4□□□□□ -1.38
CDC7-204ENST00000486509 UPK3BL2E5RIL1 263 aa6.4□□□□□ -1.38
CDC7-204ENST00000486509 E9PSI1 815 aa6.4□□□□□ -1.38
CDC7-204ENST00000486509 IGF2BP3O00425 579 aaKnown RBP eCLIP6.4□□□□□ -1.38
CDC7-204ENST00000486509 SCAMP3O14828 347 aaKnown RBP6.4□□□□□ -1.38
CDC7-204ENST00000486509 DNAJA2O60884 412 aa6.4□□□□□ -1.38
CDC7-204ENST00000486509 RACK1P63244 317 aaKnown RBP6.4□□□□□ -1.38
CDC7-204ENST00000486509 METTL16Q86W50 562 aaKnown RBP6.4□□□□□ -1.38
CDC7-204ENST00000486509 WFDC3Q8IUB2 231 aa6.4□□□□□ -1.38
CDC7-204ENST00000486509 NETO1Q8TDF5 533 aa6.4□□□□□ -1.38
CDC7-204ENST00000486509 EAF1Q96JC9 268 aaPredicted RBP6.4□□□□□ -1.38
CDC7-204ENST00000486509 BRMS1Q9HCU9 246 aa6.4□□□□□ -1.38
CDC7-204ENST00000486509 REV1Q9UBZ9 1251 aa6.4□□□□□ -1.38
CDC7-204ENST00000486509 PCDHGB7Q9Y5F8 929 aa6.4□□□□□ -1.38
CDC7-204ENST00000486509 GRIN2AQ12879 1464 aa6.4□□□□□ -1.39
CDC7-204ENST00000486509 DIP2BQ9P265 1576 aa6.4□□□□□ -1.39
CDC7-204ENST00000486509 KDM6BO15054 1643 aa6.39□□□□□ -1.39
CDC7-204ENST00000486509 HTR3BO95264 441 aa6.39□□□□□ -1.39
CDC7-204ENST00000486509 WNT11O96014 354 aa6.39□□□□□ -1.39
CDC7-204ENST00000486509 CEACAM5P06731 702 aa6.39□□□□□ -1.39
CDC7-204ENST00000486509 DIEXFQ68CQ4 756 aaKnown RBP6.39□□□□□ -1.39
CDC7-204ENST00000486509 LETMD1Q6P1Q0 360 aa6.39□□□□□ -1.39
CDC7-204ENST00000486509 NBPF11Q86T75 865 aa6.39□□□□□ -1.39
CDC7-204ENST00000486509 USP48Q86UV5 1035 aa6.39□□□□□ -1.39
CDC7-204ENST00000486509 GTF2IRD1Q9UHL9 959 aa6.39□□□□□ -1.39
CDC7-204ENST00000486509 ABCA10Q8WWZ4 1543 aa6.39□□□□□ -1.39
CDC7-204ENST00000486509 PRR33A8MZF0 331 aa6.38□□□□□ -1.39
CDC7-204ENST00000486509 ITIH2P19823 946 aa6.38□□□□□ -1.39
CDC7-204ENST00000486509 GP2P55259 537 aaKnown RBP6.38□□□□□ -1.39
CDC7-204ENST00000486509 HDLBPQ00341 1268 aaKnown RBP6.38□□□□□ -1.39
CDC7-204ENST00000486509 NKPD1Q17RQ9 610 aa6.38□□□□□ -1.39
CDC7-204ENST00000486509 CWF19L2Q2TBE0 894 aaKnown RBP6.38□□□□□ -1.39
CDC7-204ENST00000486509 LCE3BQ5TA77 95 aa6.38□□□□□ -1.39
CDC7-204ENST00000486509 FAM13CQ8NE31 585 aa6.38□□□□□ -1.39
CDC7-204ENST00000486509 DNAJB8Q8NHS0 232 aa6.38□□□□□ -1.39
CDC7-204ENST00000486509 PPP1R13LQ8WUF5 828 aa6.38□□□□□ -1.39
CDC7-204ENST00000486509 BCL7CQ8WUZ0 217 aaPredicted RBP6.38□□□□□ -1.39
CDC7-204ENST00000486509 SPON2Q9BUD6 331 aa6.38□□□□□ -1.39
CDC7-204ENST00000486509 NT5C1AQ9BXI3 368 aa6.38□□□□□ -1.39
CDC7-204ENST00000486509 TNKS2Q9H2K2 1166 aa6.38□□□□□ -1.39
CDC7-204ENST00000486509 PRDM5Q9NQX1 630 aaPredicted RBP6.38□□□□□ -1.39
CDC7-204ENST00000486509 DDX41Q9UJV9 622 aaKnown RBP6.38□□□□□ -1.39
CDC7-204ENST00000486509 MAPK8IP1Q9UQF2 711 aa6.38□□□□□ -1.39
CDC7-204ENST00000486509 OAS3Q9Y6K5 1087 aaKnown RBP6.38□□□□□ -1.39
CDC7-204ENST00000486509 CUX1P39880 1505 aa6.38□□□□□ -1.39
CDC7-204ENST00000486509 ADAMTS12P58397 1594 aa6.37□□□□□ -1.39
CDC7-204ENST00000486509 CHURC1-FNTBB4DL54 471 aa6.37□□□□□ -1.39
CDC7-204ENST00000486509 BNIP3Q12983 259 aa6.37□□□□□ -1.39
CDC7-204ENST00000486509 IFI16Q16666 785 aaKnown RBP6.37□□□□□ -1.39
CDC7-204ENST00000486509 SEZ6Q53EL9 994 aa6.37□□□□□ -1.39
CDC7-204ENST00000486509 CDH24Q86UP0 819 aa6.37□□□□□ -1.39
CDC7-204ENST00000486509 VSIG10LQ86VR7 867 aa6.37□□□□□ -1.39
CDC7-204ENST00000486509 KIAA0825Q8IV33 1275 aa6.37□□□□□ -1.39
CDC7-204ENST00000486509 SPACA3Q8IXA5 215 aa6.37□□□□□ -1.39
CDC7-204ENST00000486509 TPX2Q9ULW0 747 aaKnown RBP6.37□□□□□ -1.39
CDC7-204ENST00000486509 PCDHB14Q9Y5E9 798 aa6.37□□□□□ -1.39
CDC7-204ENST00000486509 ATE1O95260 518 aa6.36□□□□□ -1.39
CDC7-204ENST00000486509 CLCQ05315 142 aa6.36□□□□□ -1.39
CDC7-204ENST00000486509 APOBRQ0VD83 1088 aa6.36□□□□□ -1.39
CDC7-204ENST00000486509 C9orf131Q5VYM1 1079 aa6.36□□□□□ -1.39
CDC7-204ENST00000486509 ZNF574Q6ZN55 896 aaPredicted RBP6.36□□□□□ -1.39
CDC7-204ENST00000486509 ARHGAP27Q6ZUM4 889 aa6.36□□□□□ -1.39
CDC7-204ENST00000486509 C22orf34Q6ZV56 151 aa6.36□□□□□ -1.39
CDC7-204ENST00000486509 SPRED2Q7Z698 418 aa6.36□□□□□ -1.39
CDC7-204ENST00000486509 SLITRK4Q8IW52 837 aa6.36□□□□□ -1.39
CDC7-204ENST00000486509 SLFN12Q8IYM2 578 aa6.36□□□□□ -1.39
CDC7-204ENST00000486509 EHMT1Q9H9B1 1298 aa6.36□□□□□ -1.39
CDC7-204ENST00000486509 PAK6Q9NQU5 681 aaPredicted RBP6.36□□□□□ -1.39
CDC7-204ENST00000486509 KLHL3Q9UH77 587 aa6.36□□□□□ -1.39
CDC7-204ENST00000486509 ANGEL1Q9UNK9 670 aaKnown RBP6.36□□□□□ -1.39
CDC7-204ENST00000486509 SLC22A31A6NKX4 558 aa6.35□□□□□ -1.39
CDC7-204ENST00000486509 ZNF865P0CJ78 1059 aaPredicted RBP6.35□□□□□ -1.39
CDC7-204ENST00000486509 YARSP54577 528 aaKnown RBP6.35□□□□□ -1.39
CDC7-204ENST00000486509 PRKCQQ04759 706 aa6.35□□□□□ -1.39
CDC7-204ENST00000486509 SFRP5Q5T4F7 317 aa6.35□□□□□ -1.39
CDC7-204ENST00000486509 FLCNQ8NFG4 579 aa6.35□□□□□ -1.39
CDC7-204ENST00000486509 CYB5D2Q8WUJ1 264 aa6.35□□□□□ -1.39
CDC7-204ENST00000486509 NKD1Q969G9 470 aa6.35□□□□□ -1.39
CDC7-204ENST00000486509 VAV3Q9UKW4 847 aa6.35□□□□□ -1.39
CDC7-204ENST00000486509 CEP131Q9UPN4 1083 aa6.35□□□□□ -1.39
CDC7-204ENST00000486509 SLC5A6Q9Y289 635 aa6.35□□□□□ -1.39
CDC7-204ENST00000486509 CAPN6Q9Y6Q1 641 aa6.35□□□□□ -1.39
CDC7-204ENST00000486509 HECW2Q9P2P5 1572 aa6.35□□□□□ -1.39
CDC7-204ENST00000486509 COL17A1Q9UMD9 1497 aaPredicted RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms