RNA–Protein interactions for RNA: ENST00000486308.1

APH1A-207, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1A, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-207ENST00000486308 USP17L10C9JJH3 530 aa8.86□□□□□ -0.99
APH1A-207ENST00000486308 CTDSPL2Q05D32 466 aa8.86□□□□□ -0.99
APH1A-207ENST00000486308 TAF1CQ15572 869 aaPredicted RBP8.86□□□□□ -0.99
APH1A-207ENST00000486308 NOM1Q5C9Z4 860 aaKnown RBP8.86□□□□□ -0.99
APH1A-207ENST00000486308 TREML2Q5T2D2 321 aa8.86□□□□□ -0.99
APH1A-207ENST00000486308 CLEC10AQ8IUN9 316 aa8.86□□□□□ -0.99
APH1A-207ENST00000486308 PROCA1Q8NCQ7 364 aaPredicted RBP8.86□□□□□ -0.99
APH1A-207ENST00000486308 ACER1Q8TDN7 264 aa8.86□□□□□ -0.99
APH1A-207ENST00000486308 DSCC1Q9BVC3 393 aa8.86□□□□□ -0.99
APH1A-207ENST00000486308 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.86□□□□□ -0.99
APH1A-207ENST00000486308 AGTPBP1Q9UPW5 1226 aa8.86□□□□□ -0.99
APH1A-207ENST00000486308 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.86□□□□□ -0.99
APH1A-207ENST00000486308 BRCA2P51587 3418 aa8.86□□□□□ -0.99
APH1A-207ENST00000486308 GREB1LQ9C091 1923 aaPredicted RBP8.86□□□□□ -0.99
APH1A-207ENST00000486308 A0A1W2PRG0 241 aa8.85□□□□□ -0.99
APH1A-207ENST00000486308 C19orf81C9J6K1 198 aa8.85□□□□□ -0.99
APH1A-207ENST00000486308 GPR25O00155 361 aa8.85□□□□□ -0.99
APH1A-207ENST00000486308 SGSM2O43147 1006 aa8.85□□□□□ -0.99
APH1A-207ENST00000486308 PRDM1O75626 825 aa8.85□□□□□ -0.99
APH1A-207ENST00000486308 ICA1Q05084 483 aa8.85□□□□□ -0.99
APH1A-207ENST00000486308 COL13A1Q5TAT6 717 aaPredicted RBP8.85□□□□□ -0.99
APH1A-207ENST00000486308 SIAH1Q8IUQ4 282 aa8.85□□□□□ -0.99
APH1A-207ENST00000486308 ZNF296Q8WUU4 475 aaPredicted RBP8.85□□□□□ -0.99
APH1A-207ENST00000486308 C12orf42Q96LP6 360 aa8.85□□□□□ -0.99
APH1A-207ENST00000486308 NBPF3Q9H094 633 aa8.85□□□□□ -0.99
APH1A-207ENST00000486308 KIAA1683Q9H0B3 1180 aa8.85□□□□□ -0.99
APH1A-207ENST00000486308 MKNK2Q9HBH9 465 aa8.85□□□□□ -0.99
APH1A-207ENST00000486308 ZNF287Q9HBT7 754 aa8.85□□□□□ -0.99
APH1A-207ENST00000486308 ZFYVE28Q9HCC9 887 aa8.85□□□□□ -0.99
APH1A-207ENST00000486308 EMILIN3Q9NT22 766 aa8.85□□□□□ -0.99
APH1A-207ENST00000486308 SLC45A1Q9Y2W3 748 aa8.85□□□□□ -0.99
APH1A-207ENST00000486308 MYH8P13535 1937 aa8.85□□□□□ -0.99
APH1A-207ENST00000486308 PLIN4Q96Q06 1357 aa8.85□□□□□ -0.99
APH1A-207ENST00000486308 IGKV6D-41A0A0C4DH26 115 aa8.84□□□□□ -0.99
APH1A-207ENST00000486308 ORC4O43929 436 aa8.84□□□□□ -0.99
APH1A-207ENST00000486308 TLR2O60603 784 aa8.84□□□□□ -0.99
APH1A-207ENST00000486308 SLC3A2P08195 630 aaKnown RBP8.84□□□□□ -0.99
APH1A-207ENST00000486308 FGRP09769 529 aa8.84□□□□□ -0.99
APH1A-207ENST00000486308 CYP2C8P10632 490 aa8.84□□□□□ -0.99
APH1A-207ENST00000486308 HAND2P61296 217 aa8.84□□□□□ -0.99
APH1A-207ENST00000486308 PDE4BQ07343 736 aa8.84□□□□□ -0.99
APH1A-207ENST00000486308 ZYXQ15942 572 aaKnown RBP8.84□□□□□ -0.99
APH1A-207ENST00000486308 USP17L2Q6R6M4 530 aa8.84□□□□□ -0.99
APH1A-207ENST00000486308 TBC1D10CQ8IV04 446 aa8.84□□□□□ -0.99
APH1A-207ENST00000486308 RUFY2Q8WXA3 655 aa8.84□□□□□ -0.99
APH1A-207ENST00000486308 PARK7Q99497 189 aaKnown RBP8.84□□□□□ -0.99
APH1A-207ENST00000486308 FEZ1Q99689 392 aa8.84□□□□□ -0.99
APH1A-207ENST00000486308 KANSL2Q9H9L4 492 aa8.84□□□□□ -0.99
APH1A-207ENST00000486308 INCENPQ9NQS7 918 aa8.84□□□□□ -0.99
APH1A-207ENST00000486308 TMOD4Q9NZQ9 345 aa8.84□□□□□ -0.99
APH1A-207ENST00000486308 CASP8AP2Q9UKL3 1982 aa8.83□□□□□ -1
APH1A-207ENST00000486308 LAMA4Q16363 1823 aa8.83□□□□□ -1
APH1A-207ENST00000486308 FKTNO75072 461 aa8.83□□□□□ -1
APH1A-207ENST00000486308 EEF2P13639 858 aaKnown RBP8.83□□□□□ -1
APH1A-207ENST00000486308 VCAM1P19320 739 aa8.83□□□□□ -1
APH1A-207ENST00000486308 HOXA7P31268 230 aaPredicted RBP8.83□□□□□ -1
APH1A-207ENST00000486308 USP14P54578 494 aa8.83□□□□□ -1
APH1A-207ENST00000486308 PTH1RQ03431 593 aa8.83□□□□□ -1
APH1A-207ENST00000486308 FAM47AQ5JRC9 791 aa8.83□□□□□ -1
APH1A-207ENST00000486308 KIAA1755Q5JYT7 1200 aa8.83□□□□□ -1
APH1A-207ENST00000486308 C17orf99Q6UX52 265 aa8.83□□□□□ -1
APH1A-207ENST00000486308 ZNF444Q8N0Y2 327 aaPredicted RBP8.83□□□□□ -1
APH1A-207ENST00000486308 NEDD1Q8NHV4 660 aa8.83□□□□□ -1
APH1A-207ENST00000486308 NKX2-3Q8TAU0 364 aa8.83□□□□□ -1
APH1A-207ENST00000486308 STAG1Q8WVM7 1258 aa8.83□□□□□ -1
APH1A-207ENST00000486308 ESYT1Q9BSJ8 1104 aa8.83□□□□□ -1
APH1A-207ENST00000486308 ASCC2Q9H1I8 757 aaPredicted RBP8.83□□□□□ -1
APH1A-207ENST00000486308 ARHGEF10LQ9HCE6 1279 aa8.83□□□□□ -1
APH1A-207ENST00000486308 RNF216Q9NWF9 866 aaPredicted RBP8.83□□□□□ -1
APH1A-207ENST00000486308 TMX2Q9Y320 296 aa8.83□□□□□ -1
APH1A-207ENST00000486308 NEDD4P46934 1319 aa8.82□□□□□ -1
APH1A-207ENST00000486308 ZNF213O14771 459 aa8.82□□□□□ -1
APH1A-207ENST00000486308 TSPY3P0CV98 308 aa8.82□□□□□ -1
APH1A-207ENST00000486308 TSPY8P0CW00 308 aa8.82□□□□□ -1
APH1A-207ENST00000486308 BCRP11274 1271 aa8.82□□□□□ -1
APH1A-207ENST00000486308 PCP11498 1178 aaKnown RBP8.82□□□□□ -1
APH1A-207ENST00000486308 CAP1Q01518 475 aa8.82□□□□□ -1
APH1A-207ENST00000486308 TFAP4Q01664 338 aa8.82□□□□□ -1
APH1A-207ENST00000486308 SP3Q02447 781 aa8.82□□□□□ -1
APH1A-207ENST00000486308 PABPC4Q13310 644 aaKnown RBP eCLIP8.82□□□□□ -1
APH1A-207ENST00000486308 AKNAD1Q5T1N1 836 aa8.82□□□□□ -1
APH1A-207ENST00000486308 CEP95Q96GE4 821 aa8.82□□□□□ -1
APH1A-207ENST00000486308 SH2D4AQ9H788 454 aa8.82□□□□□ -1
APH1A-207ENST00000486308 VCPKMTQ9H867 229 aa8.82□□□□□ -1
APH1A-207ENST00000486308 MTMR4Q9NYA4 1195 aa8.82□□□□□ -1
APH1A-207ENST00000486308 NYAP2Q9P242 653 aa8.82□□□□□ -1
APH1A-207ENST00000486308 CPA4Q9UI42 421 aa8.82□□□□□ -1
APH1A-207ENST00000486308 CTNNA3Q9UI47 895 aa8.82□□□□□ -1
APH1A-207ENST00000486308 PNMA3Q9UL41 463 aa8.82□□□□□ -1
APH1A-207ENST00000486308 TSPY2A6NKD2 308 aa8.81□□□□□ -1
APH1A-207ENST00000486308 USP17L15C9J2P7 530 aa8.81□□□□□ -1
APH1A-207ENST00000486308 USP17L13C9JLJ4 530 aa8.81□□□□□ -1
APH1A-207ENST00000486308 USP17L11C9JVI0 530 aa8.81□□□□□ -1
APH1A-207ENST00000486308 USP17L18D6R9N7 530 aa8.81□□□□□ -1
APH1A-207ENST00000486308 USP17L22D6RA61 530 aa8.81□□□□□ -1
APH1A-207ENST00000486308 USP17L17D6RBQ6 530 aa8.81□□□□□ -1
APH1A-207ENST00000486308 USP17L19D6RCP7 530 aa8.81□□□□□ -1
APH1A-207ENST00000486308 USP17L20D6RJB6 530 aa8.81□□□□□ -1
APH1A-207ENST00000486308 RANBP6O60518 1105 aaKnown RBP8.81□□□□□ -1
APH1A-207ENST00000486308 NMT2O60551 498 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms