RNA–Protein interactions for RNA: ENST00000486194.1

HLA-F-228, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-228ENST00000486194 USP17L24Q0WX57 530 aa26.41■■□□□ 1.82
HLA-F-228ENST00000486194 ZYXQ15942 572 aaKnown RBP26.41■■□□□ 1.82
HLA-F-228ENST00000486194 C12orf60Q5U649 245 aa26.41■■□□□ 1.82
HLA-F-228ENST00000486194 TMEM179Q6ZVK1 233 aa26.41■■□□□ 1.82
HLA-F-228ENST00000486194 GPRC5AQ8NFJ5 357 aa26.41■■□□□ 1.82
HLA-F-228ENST00000486194 APPBP2Q92624 585 aa26.41■■□□□ 1.82
HLA-F-228ENST00000486194 MYH7P12883 1935 aa26.4■■□□□ 1.82
HLA-F-228ENST00000486194 USP17L12C9JPN9 530 aa26.4■■□□□ 1.82
HLA-F-228ENST00000486194 USP17L21D6R901 530 aa26.4■■□□□ 1.82
HLA-F-228ENST00000486194 GLRX3O76003 335 aaKnown RBP26.4■■□□□ 1.82
HLA-F-228ENST00000486194 SEPT2Q15019 361 aa26.4■■□□□ 1.82
HLA-F-228ENST00000486194 TSHZ3Q63HK5 1081 aa26.4■■□□□ 1.82
HLA-F-228ENST00000486194 CCDC17Q96LX7 622 aa26.4■■□□□ 1.82
HLA-F-228ENST00000486194 RNF113AO15541 343 aaKnown RBP26.39■■□□□ 1.82
HLA-F-228ENST00000486194 CHGBP05060 677 aa26.39■■□□□ 1.82
HLA-F-228ENST00000486194 GUCY1A2P33402 732 aa26.39■■□□□ 1.82
HLA-F-228ENST00000486194 MTFR1Q15390 333 aa26.39■■□□□ 1.82
HLA-F-228ENST00000486194 PRPF38BQ5VTL8 546 aaKnown RBP26.39■■□□□ 1.82
HLA-F-228ENST00000486194 ACER1Q8TDN7 264 aa26.39■■□□□ 1.82
HLA-F-228ENST00000486194 GCC1Q96CN9 775 aa26.39■■□□□ 1.82
HLA-F-228ENST00000486194 ARPP21Q9UBL0 812 aaPredicted RBP26.39■■□□□ 1.82
HLA-F-228ENST00000486194 CCL5P13501 91 aa26.38■■□□□ 1.81
HLA-F-228ENST00000486194 EVX2Q03828 476 aa26.38■■□□□ 1.81
HLA-F-228ENST00000486194 GIMAP6Q6P9H5 292 aa26.38■■□□□ 1.81
HLA-F-228ENST00000486194 CCAR1Q8IX12 1150 aaKnown RBP26.38■■□□□ 1.81
HLA-F-228ENST00000486194 SLC44A5Q8NCS7 719 aa26.38■■□□□ 1.81
HLA-F-228ENST00000486194 DYNLL2Q96FJ2 89 aa26.38■■□□□ 1.81
HLA-F-228ENST00000486194 STRBPQ96SI9 672 aaKnown RBP26.38■■□□□ 1.81
HLA-F-228ENST00000486194 KIAA0100Q14667 2235 aaKnown RBP26.38■■□□□ 1.81
HLA-F-228ENST00000486194 GNAT2P19087 354 aa26.37■■□□□ 1.81
HLA-F-228ENST00000486194 VCAM1P19320 739 aa26.37■■□□□ 1.81
HLA-F-228ENST00000486194 MX1P20591 662 aa26.37■■□□□ 1.81
HLA-F-228ENST00000486194 MAPK4P31152 587 aa26.37■■□□□ 1.81
HLA-F-228ENST00000486194 HDAC1Q13547 482 aaPredicted RBP26.37■■□□□ 1.81
HLA-F-228ENST00000486194 CATSPERGQ6ZRH7 1159 aa26.37■■□□□ 1.81
HLA-F-228ENST00000486194 C16orf86Q6ZW13 317 aa26.37■■□□□ 1.81
HLA-F-228ENST00000486194 RNF208Q9H0X6 261 aa26.37■■□□□ 1.81
HLA-F-228ENST00000486194 SH2D4AQ9H788 454 aa26.37■■□□□ 1.81
HLA-F-228ENST00000486194 RBPJLQ9UBG7 517 aa26.37■■□□□ 1.81
HLA-F-228ENST00000486194 GJB1P08034 283 aa26.36■■□□□ 1.81
HLA-F-228ENST00000486194 CDK8P49336 464 aa26.36■■□□□ 1.81
HLA-F-228ENST00000486194 ERVK-9P63128 1117 aa26.36■■□□□ 1.81
HLA-F-228ENST00000486194 ERVK-24P63145 666 aa26.36■■□□□ 1.81
HLA-F-228ENST00000486194 CTR9Q6PD62 1173 aa26.36■■□□□ 1.81
HLA-F-228ENST00000486194 PI4K2BQ8TCG2 481 aa26.36■■□□□ 1.81
HLA-F-228ENST00000486194 ARHGEF10LQ9HCE6 1279 aa26.36■■□□□ 1.81
HLA-F-228ENST00000486194 TXNRD2Q9NNW7 524 aa26.36■■□□□ 1.81
HLA-F-228ENST00000486194 RABGAP1Q9Y3P9 1069 aa26.36■■□□□ 1.81
HLA-F-228ENST00000486194 ELNP15502 786 aa26.35■■□□□ 1.81
HLA-F-228ENST00000486194 CAPN2P17655 700 aa26.35■■□□□ 1.81
HLA-F-228ENST00000486194 ANKRD45Q5TZF3 282 aa26.35■■□□□ 1.81
HLA-F-228ENST00000486194 OSBP2Q969R2 916 aa26.35■■□□□ 1.81
HLA-F-228ENST00000486194 PAGR1Q9BTK6 254 aa26.35■■□□□ 1.81
HLA-F-228ENST00000486194 CYP2D7A0A087X1C5 515 aa26.34■■□□□ 1.81
HLA-F-228ENST00000486194 INHAP05111 366 aa26.34■■□□□ 1.81
HLA-F-228ENST00000486194 GJA8P48165 433 aa26.34■■□□□ 1.81
HLA-F-228ENST00000486194 CCNA1P78396 465 aa26.34■■□□□ 1.81
HLA-F-228ENST00000486194 SBK1Q52WX2 424 aa26.34■■□□□ 1.81
HLA-F-228ENST00000486194 SOCS4Q8WXH5 440 aa26.34■■□□□ 1.81
HLA-F-228ENST00000486194 RPAP3Q9H6T3 665 aaPredicted RBP26.34■■□□□ 1.81
HLA-F-228ENST00000486194 GJD2Q9UKL4 321 aa26.34■■□□□ 1.81
HLA-F-228ENST00000486194 PDE4DIPQ5VU43 2346 aa26.34■■□□□ 1.81
HLA-F-228ENST00000486194 AKR1B1P15121 316 aa26.33■■□□□ 1.81
HLA-F-228ENST00000486194 ICA1Q05084 483 aa26.33■■□□□ 1.81
HLA-F-228ENST00000486194 LBX2Q6XYB7 198 aa26.33■■□□□ 1.81
HLA-F-228ENST00000486194 LPAR1Q92633 364 aa26.33■■□□□ 1.81
HLA-F-228ENST00000486194 NUDT12Q9BQG2 462 aa26.33■■□□□ 1.81
HLA-F-228ENST00000486194 FSD1Q9BTV5 496 aa26.33■■□□□ 1.81
HLA-F-228ENST00000486194 TNRC18O15417 2968 aaPredicted RBP26.33■■□□□ 1.81
HLA-F-228ENST00000486194 CENPFP49454 3210 aa26.32■■□□□ 1.8
HLA-F-228ENST00000486194 A0A1W2PRG0 241 aa26.32■■□□□ 1.8
HLA-F-228ENST00000486194 GSG1L2A8MUP6 293 aa26.32■■□□□ 1.8
HLA-F-228ENST00000486194 GPAA1O43292 621 aa26.32■■□□□ 1.8
HLA-F-228ENST00000486194 OTUD7AQ8TE49 926 aaPredicted RBP26.32■■□□□ 1.8
HLA-F-228ENST00000486194 CWC22Q9HCG8 908 aaKnown RBP26.32■■□□□ 1.8
HLA-F-228ENST00000486194 HMGCRP04035 888 aa26.31■■□□□ 1.8
HLA-F-228ENST00000486194 Q3C1V9 767 aa26.31■■□□□ 1.8
HLA-F-228ENST00000486194 UNC93B1Q9H1C4 597 aa26.31■■□□□ 1.8
HLA-F-228ENST00000486194 KANSL2Q9H9L4 492 aa26.31■■□□□ 1.8
HLA-F-228ENST00000486194 HOXC10Q9NYD6 342 aa26.31■■□□□ 1.8
HLA-F-228ENST00000486194 TMX2Q9Y320 296 aa26.31■■□□□ 1.8
HLA-F-228ENST00000486194 BAZ2AQ9UIF9 1905 aaKnown RBP26.31■■□□□ 1.8
HLA-F-228ENST00000486194 TRMT44Q8IYL2 757 aaKnown RBP26.3■■□□□ 1.8
HLA-F-228ENST00000486194 NACAP1Q9BZK3 213 aa26.3■■□□□ 1.8
HLA-F-228ENST00000486194 ZNF287Q9HBT7 754 aa26.3■■□□□ 1.8
HLA-F-228ENST00000486194 APPP05067 770 aa26.29■■□□□ 1.8
HLA-F-228ENST00000486194 XRCC5P13010 732 aaKnown RBP26.29■■□□□ 1.8
HLA-F-228ENST00000486194 TDO2P48775 406 aa26.29■■□□□ 1.8
HLA-F-228ENST00000486194 COG2Q14746 738 aa26.29■■□□□ 1.8
HLA-F-228ENST00000486194 GPR142Q7Z601 462 aa26.29■■□□□ 1.8
HLA-F-228ENST00000486194 PLEKHH3Q7Z736 793 aa26.29■■□□□ 1.8
HLA-F-228ENST00000486194 U2AF1L4Q8WU68 220 aaKnown RBP26.29■■□□□ 1.8
HLA-F-228ENST00000486194 SHISA4Q96DD7 197 aa26.29■■□□□ 1.8
HLA-F-228ENST00000486194 TANGO6Q9C0B7 1094 aa26.29■■□□□ 1.8
HLA-F-228ENST00000486194 RWDD1Q9H446 243 aaPredicted RBP26.29■■□□□ 1.8
HLA-F-228ENST00000486194 SALL3Q9BXA9 1300 aa26.29■■□□□ 1.8
HLA-F-228ENST00000486194 SPDYE16A6NNV3 312 aaPredicted RBP26.28■■□□□ 1.8
HLA-F-228ENST00000486194 PEX10O60683 326 aa26.28■■□□□ 1.8
HLA-F-228ENST00000486194 PORCNQ9H237 461 aa26.28■■□□□ 1.8
HLA-F-228ENST00000486194 VCPKMTQ9H867 229 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms