RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 KAT14Q9H8E8 782 aa16.84■□□□□ 0.29
COL9A1-207ENST00000486080 PGAP2Q9UHJ9 254 aa16.84■□□□□ 0.29
COL9A1-207ENST00000486080 HACL1Q9UJ83 578 aa16.84■□□□□ 0.29
COL9A1-207ENST00000486080 STX8Q9UNK0 236 aa16.84■□□□□ 0.29
COL9A1-207ENST00000486080 PLIN4Q96Q06 1357 aa16.84■□□□□ 0.29
COL9A1-207ENST00000486080 IGKV6D-41A0A0C4DH26 115 aa16.84■□□□□ 0.29
COL9A1-207ENST00000486080 MPHOSPH10O00566 681 aaKnown RBP16.84■□□□□ 0.29
COL9A1-207ENST00000486080 RCAN1P53805 252 aa16.84■□□□□ 0.29
COL9A1-207ENST00000486080 RASA3Q14644 834 aa16.84■□□□□ 0.29
COL9A1-207ENST00000486080 TATDN1Q6P1N9 297 aa16.84■□□□□ 0.29
COL9A1-207ENST00000486080 CMTR1Q8N1G2 835 aaKnown RBP16.84■□□□□ 0.29
COL9A1-207ENST00000486080 PHKBQ93100 1093 aa16.84■□□□□ 0.29
COL9A1-207ENST00000486080 TMEM47Q9BQJ4 181 aa16.84■□□□□ 0.29
COL9A1-207ENST00000486080 HIRAP54198 1017 aaPredicted RBP16.83■□□□□ 0.28
COL9A1-207ENST00000486080 HMGN5P82970 282 aaKnown RBP16.83■□□□□ 0.28
COL9A1-207ENST00000486080 RRP1BQ14684 758 aaKnown RBP16.83■□□□□ 0.28
COL9A1-207ENST00000486080 CERKLQ49MI3 558 aaPredicted RBP16.83■□□□□ 0.28
COL9A1-207ENST00000486080 PNMA1Q8ND90 353 aa16.83■□□□□ 0.28
COL9A1-207ENST00000486080 POLR2AP24928 1970 aaKnown RBP16.83■□□□□ 0.28
COL9A1-207ENST00000486080 MYH4Q9Y623 1939 aa16.82■□□□□ 0.28
COL9A1-207ENST00000486080 DDAH1O94760 285 aa16.82■□□□□ 0.28
COL9A1-207ENST00000486080 FOSBP53539 338 aa16.82■□□□□ 0.28
COL9A1-207ENST00000486080 FAM184AQ8NB25 1140 aa16.82■□□□□ 0.28
COL9A1-207ENST00000486080 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.82■□□□□ 0.28
COL9A1-207ENST00000486080 MTMR4Q9NYA4 1195 aa16.82■□□□□ 0.28
COL9A1-207ENST00000486080 MTMR6Q9Y217 621 aa16.82■□□□□ 0.28
COL9A1-207ENST00000486080 WDR33Q9C0J8 1336 aaKnown RBP16.82■□□□□ 0.28
COL9A1-207ENST00000486080 GRIN3BO60391 1043 aa16.82■□□□□ 0.28
COL9A1-207ENST00000486080 GDF11O95390 407 aa16.82■□□□□ 0.28
COL9A1-207ENST00000486080 NOVP48745 357 aa16.82■□□□□ 0.28
COL9A1-207ENST00000486080 TNNI2P48788 182 aa16.82■□□□□ 0.28
COL9A1-207ENST00000486080 JAG1P78504 1218 aa16.82■□□□□ 0.28
COL9A1-207ENST00000486080 MIGA2Q7L4E1 593 aa16.82■□□□□ 0.28
COL9A1-207ENST00000486080 CCDC82Q8N4S0 544 aa16.82■□□□□ 0.28
COL9A1-207ENST00000486080 CCDC17Q96LX7 622 aa16.82■□□□□ 0.28
COL9A1-207ENST00000486080 TEPSINQ96N21 525 aa16.82■□□□□ 0.28
COL9A1-207ENST00000486080 ORC3Q9UBD5 711 aaPredicted RBP16.82■□□□□ 0.28
COL9A1-207ENST00000486080 MYH6P13533 1939 aa16.81■□□□□ 0.28
COL9A1-207ENST00000486080 VPS37CA5D8V6 355 aaPredicted RBP16.81■□□□□ 0.28
COL9A1-207ENST00000486080 CALM1P0DP23 149 aa16.81■□□□□ 0.28
COL9A1-207ENST00000486080 CALM2P0DP24 149 aa16.81■□□□□ 0.28
COL9A1-207ENST00000486080 CALM3P0DP25 149 aa16.81■□□□□ 0.28
COL9A1-207ENST00000486080 ZSCAN22P10073 491 aaPredicted RBP16.81■□□□□ 0.28
COL9A1-207ENST00000486080 PDCP20941 246 aa16.81■□□□□ 0.28
COL9A1-207ENST00000486080 NFKBIBQ15653 356 aa16.81■□□□□ 0.28
COL9A1-207ENST00000486080 ANGEL2Q5VTE6 544 aaKnown RBP16.81■□□□□ 0.28
COL9A1-207ENST00000486080 CPLX2Q6PUV4 134 aaKnown RBP16.81■□□□□ 0.28
COL9A1-207ENST00000486080 CHAMP1Q96JM3 812 aa16.81■□□□□ 0.28
COL9A1-207ENST00000486080 HERC5Q9UII4 1024 aaKnown RBP16.81■□□□□ 0.28
COL9A1-207ENST00000486080 TAOK2Q9UL54 1235 aa16.81■□□□□ 0.28
COL9A1-207ENST00000486080 MTMR7Q9Y216 660 aa16.81■□□□□ 0.28
COL9A1-207ENST00000486080 BAZ2BQ9UIF8 2168 aaKnown RBP16.81■□□□□ 0.28
COL9A1-207ENST00000486080 CCDC196A0A1B0GTZ2 297 aa16.8■□□□□ 0.28
COL9A1-207ENST00000486080 UBE2Q2LH0YL09 131 aa16.8■□□□□ 0.28
COL9A1-207ENST00000486080 CDKL5O76039 1030 aa16.8■□□□□ 0.28
COL9A1-207ENST00000486080 PLEKHA8P1O95397 391 aa16.8■□□□□ 0.28
COL9A1-207ENST00000486080 TOP1P11387 765 aaKnown RBP16.8■□□□□ 0.28
COL9A1-207ENST00000486080 IFNAR1P17181 557 aa16.8■□□□□ 0.28
COL9A1-207ENST00000486080 TNFAIP1Q13829 316 aa16.8■□□□□ 0.28
COL9A1-207ENST00000486080 CDC37L1Q7L3B6 337 aa16.8■□□□□ 0.28
COL9A1-207ENST00000486080 RASGRP2Q7LDG7 609 aa16.8■□□□□ 0.28
COL9A1-207ENST00000486080 NBPF11Q86T75 865 aa16.8■□□□□ 0.28
COL9A1-207ENST00000486080 DEFB129Q9H1M3 183 aa16.8■□□□□ 0.28
COL9A1-207ENST00000486080 LMOD1P29536 600 aaPredicted RBP16.8■□□□□ 0.28
COL9A1-207ENST00000486080 ABCB5Q2M3G0 1257 aa16.8■□□□□ 0.28
COL9A1-207ENST00000486080 SLC26A6Q9BXS9 759 aa16.8■□□□□ 0.28
COL9A1-207ENST00000486080 CLIP2Q9UDT6 1046 aa16.8■□□□□ 0.28
COL9A1-207ENST00000486080 GUCY1A2P33402 732 aa16.79■□□□□ 0.28
COL9A1-207ENST00000486080 SSRP1Q08945 709 aaKnown RBP16.79■□□□□ 0.28
COL9A1-207ENST00000486080 FUT2Q10981 343 aa16.79■□□□□ 0.28
COL9A1-207ENST00000486080 SEPT2Q15019 361 aa16.79■□□□□ 0.28
COL9A1-207ENST00000486080 PPP2R5BQ15173 497 aa16.79■□□□□ 0.28
COL9A1-207ENST00000486080 LRRC47Q8N1G4 583 aaKnown RBP16.79■□□□□ 0.28
COL9A1-207ENST00000486080 CTCFLQ8NI51 663 aaPredicted RBP16.79■□□□□ 0.28
COL9A1-207ENST00000486080 AIFM3Q96NN9 605 aa16.79■□□□□ 0.28
COL9A1-207ENST00000486080 RBM28Q9NW13 759 aaKnown RBP16.79■□□□□ 0.28
COL9A1-207ENST00000486080 GGA3Q9NZ52 723 aa16.79■□□□□ 0.28
COL9A1-207ENST00000486080 TBC1D12O60347 775 aa16.78■□□□□ 0.28
COL9A1-207ENST00000486080 FMNL1O95466 1100 aaPredicted RBP16.78■□□□□ 0.28
COL9A1-207ENST00000486080 TTLL1O95922 423 aa16.78■□□□□ 0.28
COL9A1-207ENST00000486080 GH2P01242 217 aa16.78■□□□□ 0.28
COL9A1-207ENST00000486080 ATP2B2Q01814 1243 aa16.78■□□□□ 0.28
COL9A1-207ENST00000486080 DPY19L2Q6NUT2 758 aa16.78■□□□□ 0.28
COL9A1-207ENST00000486080 TMTC3Q6ZXV5 915 aa16.78■□□□□ 0.28
COL9A1-207ENST00000486080 STAG2Q8N3U4 1231 aa16.78■□□□□ 0.28
COL9A1-207ENST00000486080 ADARB2Q9NS39 739 aaKnown RBP16.78■□□□□ 0.28
COL9A1-207ENST00000486080 GJB4Q9NTQ9 266 aa16.78■□□□□ 0.28
COL9A1-207ENST00000486080 TCHHQ07283 1943 aa16.78■□□□□ 0.28
COL9A1-207ENST00000486080 F13A1P00488 732 aa16.77■□□□□ 0.28
COL9A1-207ENST00000486080 GUCY1B3Q02153 619 aa16.77■□□□□ 0.28
COL9A1-207ENST00000486080 MAP3K10Q02779 954 aa16.77■□□□□ 0.28
COL9A1-207ENST00000486080 GRM4Q14833 912 aa16.77■□□□□ 0.28
COL9A1-207ENST00000486080 FOXD4L6Q3SYB3 417 aaPredicted RBP16.77■□□□□ 0.28
COL9A1-207ENST00000486080 PRAMEF18Q5VWM3 479 aa16.77■□□□□ 0.28
COL9A1-207ENST00000486080 OTUD7BQ6GQQ9 843 aa16.77■□□□□ 0.28
COL9A1-207ENST00000486080 FOXD4L3Q6VB84 417 aaPredicted RBP16.77■□□□□ 0.28
COL9A1-207ENST00000486080 FERMT3Q86UX7 667 aa16.77■□□□□ 0.28
COL9A1-207ENST00000486080 SRBD1Q8N5C6 995 aaKnown RBP16.77■□□□□ 0.28
COL9A1-207ENST00000486080 MAD2L2Q9UI95 211 aa16.77■□□□□ 0.28
COL9A1-207ENST00000486080 KIF3AQ9Y496 699 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms