RNA–Protein interactions for RNA: ENST00000486045.1

RHBDF1-209, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 2

Gene RHBDF1, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-209ENST00000486045 RIOK1Q9BRS2 568 aaKnown RBP22.22■■□□□ 1.15
RHBDF1-209ENST00000486045 C11orf49Q9H6J7 331 aa22.22■■□□□ 1.15
RHBDF1-209ENST00000486045 A0A1W2PPC1 479 aa22.21■■□□□ 1.15
RHBDF1-209ENST00000486045 PLCD1P51178 756 aa22.21■■□□□ 1.15
RHBDF1-209ENST00000486045 EVX2Q03828 476 aa22.21■■□□□ 1.15
RHBDF1-209ENST00000486045 ABCB5Q2M3G0 1257 aa22.21■■□□□ 1.15
RHBDF1-209ENST00000486045 CERKLQ49MI3 558 aaPredicted RBP22.21■■□□□ 1.15
RHBDF1-209ENST00000486045 LRCH3Q96II8 777 aa22.21■■□□□ 1.15
RHBDF1-209ENST00000486045 USP17L15C9J2P7 530 aa22.2■■□□□ 1.14
RHBDF1-209ENST00000486045 USP17L13C9JLJ4 530 aa22.2■■□□□ 1.14
RHBDF1-209ENST00000486045 USP17L11C9JVI0 530 aa22.2■■□□□ 1.14
RHBDF1-209ENST00000486045 USP17L18D6R9N7 530 aa22.2■■□□□ 1.14
RHBDF1-209ENST00000486045 USP17L22D6RA61 530 aa22.2■■□□□ 1.14
RHBDF1-209ENST00000486045 USP17L17D6RBQ6 530 aa22.2■■□□□ 1.14
RHBDF1-209ENST00000486045 USP17L19D6RCP7 530 aa22.2■■□□□ 1.14
RHBDF1-209ENST00000486045 USP17L20D6RJB6 530 aa22.2■■□□□ 1.14
RHBDF1-209ENST00000486045 SYN1P17600 705 aa22.2■■□□□ 1.14
RHBDF1-209ENST00000486045 VCAM1P19320 739 aa22.2■■□□□ 1.14
RHBDF1-209ENST00000486045 CCND3P30281 292 aaPredicted RBP22.2■■□□□ 1.14
RHBDF1-209ENST00000486045 SHMT1P34896 483 aa22.2■■□□□ 1.14
RHBDF1-209ENST00000486045 RGS2P41220 211 aa22.2■■□□□ 1.14
RHBDF1-209ENST00000486045 USP17L24Q0WX57 530 aa22.2■■□□□ 1.14
RHBDF1-209ENST00000486045 TTC6Q86TZ1 520 aa22.2■■□□□ 1.14
RHBDF1-209ENST00000486045 ERC1Q8IUD2 1116 aa22.2■■□□□ 1.14
RHBDF1-209ENST00000486045 APBA2Q99767 749 aa22.2■■□□□ 1.14
RHBDF1-209ENST00000486045 RABGAP1Q9Y3P9 1069 aa22.2■■□□□ 1.14
RHBDF1-209ENST00000486045 PFASO15067 1338 aa22.2■■□□□ 1.14
RHBDF1-209ENST00000486045 ALPK3Q96L96 1907 aa22.19■■□□□ 1.14
RHBDF1-209ENST00000486045 CATSPERGQ6ZRH7 1159 aa22.19■■□□□ 1.14
RHBDF1-209ENST00000486045 TRMT44Q8IYL2 757 aaKnown RBP22.19■■□□□ 1.14
RHBDF1-209ENST00000486045 GDF15Q99988 308 aa22.19■■□□□ 1.14
RHBDF1-209ENST00000486045 KIAA1683Q9H0B3 1180 aa22.19■■□□□ 1.14
RHBDF1-209ENST00000486045 CWC22Q9HCG8 908 aaKnown RBP22.19■■□□□ 1.14
RHBDF1-209ENST00000486045 MAGEB6P1A0A0J9YX57 407 aa22.18■■□□□ 1.14
RHBDF1-209ENST00000486045 GUCY1A2P33402 732 aa22.18■■□□□ 1.14
RHBDF1-209ENST00000486045 USP14P54578 494 aa22.18■■□□□ 1.14
RHBDF1-209ENST00000486045 RHPN1Q8TCX5 695 aa22.18■■□□□ 1.14
RHBDF1-209ENST00000486045 DDX60LQ5H9U9 1706 aaKnown RBP22.17■■□□□ 1.14
RHBDF1-209ENST00000486045 APBB1O00213 710 aa22.17■■□□□ 1.14
RHBDF1-209ENST00000486045 POLR3DP05423 398 aaPredicted RBP22.17■■□□□ 1.14
RHBDF1-209ENST00000486045 PDE6AP16499 860 aa22.17■■□□□ 1.14
RHBDF1-209ENST00000486045 MAP2K5Q13163 448 aa22.17■■□□□ 1.14
RHBDF1-209ENST00000486045 WDR78Q5VTH9 848 aa22.17■■□□□ 1.14
RHBDF1-209ENST00000486045 LHX8Q68G74 356 aa22.17■■□□□ 1.14
RHBDF1-209ENST00000486045 BCL11AQ9H165 835 aa22.17■■□□□ 1.14
RHBDF1-209ENST00000486045 CABP5Q9NP86 173 aa22.17■■□□□ 1.14
RHBDF1-209ENST00000486045 FLRT1Q9NZU1 646 aa22.17■■□□□ 1.14
RHBDF1-209ENST00000486045 BTBD7Q9P203 1132 aa22.17■■□□□ 1.14
RHBDF1-209ENST00000486045 GABPAQ06546 454 aa22.16■■□□□ 1.14
RHBDF1-209ENST00000486045 SEPT2Q15019 361 aa22.16■■□□□ 1.14
RHBDF1-209ENST00000486045 SLC9C2Q5TAH2 1124 aa22.16■■□□□ 1.14
RHBDF1-209ENST00000486045 TMED8Q6PL24 325 aaPredicted RBP22.16■■□□□ 1.14
RHBDF1-209ENST00000486045 RPAP3Q9H6T3 665 aaPredicted RBP22.16■■□□□ 1.14
RHBDF1-209ENST00000486045 ZNF532Q9HCE3 1301 aa22.15■■□□□ 1.14
RHBDF1-209ENST00000486045 SPDYE16A6NNV3 312 aaPredicted RBP22.15■■□□□ 1.14
RHBDF1-209ENST00000486045 COL6A1P12109 1028 aa22.15■■□□□ 1.14
RHBDF1-209ENST00000486045 BMP8BP34820 402 aa22.15■■□□□ 1.14
RHBDF1-209ENST00000486045 MAGEA10P43363 369 aaPredicted RBP22.15■■□□□ 1.14
RHBDF1-209ENST00000486045 CCNA1P78396 465 aa22.15■■□□□ 1.14
RHBDF1-209ENST00000486045 TTF1Q15361 905 aaPredicted RBP22.15■■□□□ 1.14
RHBDF1-209ENST00000486045 EDC3Q96F86 508 aaKnown RBP22.15■■□□□ 1.14
RHBDF1-209ENST00000486045 DNAJC2Q99543 621 aaKnown RBP22.15■■□□□ 1.14
RHBDF1-209ENST00000486045 MCM9Q9NXL9 1143 aa22.15■■□□□ 1.14
RHBDF1-209ENST00000486045 MYH1P12882 1939 aa22.15■■□□□ 1.14
RHBDF1-209ENST00000486045 GOLIM4O00461 696 aa22.14■■□□□ 1.13
RHBDF1-209ENST00000486045 CYP2D6P10635 497 aa22.14■■□□□ 1.13
RHBDF1-209ENST00000486045 HSP90AB4PQ58FF6 505 aa22.14■■□□□ 1.13
RHBDF1-209ENST00000486045 LBX2Q6XYB7 198 aa22.14■■□□□ 1.13
RHBDF1-209ENST00000486045 SDR42E1Q8WUS8 393 aa22.14■■□□□ 1.13
RHBDF1-209ENST00000486045 CRNKL1Q9BZJ0 848 aaKnown RBP22.14■■□□□ 1.13
RHBDF1-209ENST00000486045 A0A1W2PRG0 241 aa22.13■■□□□ 1.13
RHBDF1-209ENST00000486045 TCRBV5S4A2TA0A5A2 114 aa22.13■■□□□ 1.13
RHBDF1-209ENST00000486045 SLC15A5A6NIM6 579 aa22.13■■□□□ 1.13
RHBDF1-209ENST00000486045 MPHOSPH10O00566 681 aaKnown RBP22.13■■□□□ 1.13
RHBDF1-209ENST00000486045 PTPREP23469 700 aa22.13■■□□□ 1.13
RHBDF1-209ENST00000486045 LCORLQ8N3X6 602 aa22.13■■□□□ 1.13
RHBDF1-209ENST00000486045 SLC44A5Q8NCS7 719 aa22.13■■□□□ 1.13
RHBDF1-209ENST00000486045 GLRX3O76003 335 aaKnown RBP22.12■■□□□ 1.13
RHBDF1-209ENST00000486045 LRRC26Q2I0M4 334 aa22.12■■□□□ 1.13
RHBDF1-209ENST00000486045 SLFNL1Q499Z3 407 aa22.12■■□□□ 1.13
RHBDF1-209ENST00000486045 SIRT2Q8IXJ6 389 aa22.12■■□□□ 1.13
RHBDF1-209ENST00000486045 CLASRPQ8N2M8 674 aaKnown RBP22.12■■□□□ 1.13
RHBDF1-209ENST00000486045 NPLOC4Q8TAT6 608 aa22.12■■□□□ 1.13
RHBDF1-209ENST00000486045 DCP1AQ9NPI6 582 aaPredicted RBP22.12■■□□□ 1.13
RHBDF1-209ENST00000486045 IFIT2P09913 472 aaKnown RBP22.11■■□□□ 1.13
RHBDF1-209ENST00000486045 GRB14Q14449 540 aa22.11■■□□□ 1.13
RHBDF1-209ENST00000486045 MFSD14CQ5VZR4 134 aa22.11■■□□□ 1.13
RHBDF1-209ENST00000486045 KIF1BPQ96EK5 621 aa22.11■■□□□ 1.13
RHBDF1-209ENST00000486045 IVNS1ABPQ9Y6Y0 642 aa22.11■■□□□ 1.13
RHBDF1-209ENST00000486045 KIAA1755Q5JYT7 1200 aa22.1■■□□□ 1.13
RHBDF1-209ENST00000486045 CLEC10AQ8IUN9 316 aa22.1■■□□□ 1.13
RHBDF1-209ENST00000486045 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.1■■□□□ 1.13
RHBDF1-209ENST00000486045 DYNLL2Q96FJ2 89 aa22.1■■□□□ 1.13
RHBDF1-209ENST00000486045 ARMT1Q9H993 441 aa22.1■■□□□ 1.13
RHBDF1-209ENST00000486045 RCAN3Q9UKA8 241 aa22.1■■□□□ 1.13
RHBDF1-209ENST00000486045 PRKAB2O43741 272 aa22.09■■□□□ 1.13
RHBDF1-209ENST00000486045 HOXC6P09630 235 aa22.09■■□□□ 1.13
RHBDF1-209ENST00000486045 CYP2C19P33261 490 aa22.09■■□□□ 1.13
RHBDF1-209ENST00000486045 ATP2B2Q01814 1243 aa22.09■■□□□ 1.13
RHBDF1-209ENST00000486045 TANGO6Q9C0B7 1094 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms