RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 USP17L10C9JJH3 530 aa25.27■■□□□ 1.64
LMBR1-217ENST00000485985 SMARCA5O60264 1052 aaPredicted RBP25.27■■□□□ 1.64
LMBR1-217ENST00000485985 ATP5JP18859 108 aa25.27■■□□□ 1.64
LMBR1-217ENST00000485985 SHMT1P34896 483 aa25.27■■□□□ 1.64
LMBR1-217ENST00000485985 TTC6Q86TZ1 520 aa25.27■■□□□ 1.64
LMBR1-217ENST00000485985 TRIB2Q92519 343 aa25.27■■□□□ 1.64
LMBR1-217ENST00000485985 LRRCC1Q9C099 1032 aa25.27■■□□□ 1.64
LMBR1-217ENST00000485985 PEX10O60683 326 aa25.26■■□□□ 1.63
LMBR1-217ENST00000485985 CYP2B6P20813 491 aa25.26■■□□□ 1.63
LMBR1-217ENST00000485985 HERVK_113P62684 666 aa25.26■■□□□ 1.63
LMBR1-217ENST00000485985 GPRC5AQ8NFJ5 357 aa25.26■■□□□ 1.63
LMBR1-217ENST00000485985 SDR42E1Q8WUS8 393 aa25.26■■□□□ 1.63
LMBR1-217ENST00000485985 HAUS7Q99871 368 aa25.26■■□□□ 1.63
LMBR1-217ENST00000485985 CRNKL1Q9BZJ0 848 aaKnown RBP25.26■■□□□ 1.63
LMBR1-217ENST00000485985 TXNRD2Q9NNW7 524 aa25.26■■□□□ 1.63
LMBR1-217ENST00000485985 EMILIN3Q9NT22 766 aa25.26■■□□□ 1.63
LMBR1-217ENST00000485985 CHGBP05060 677 aa25.25■■□□□ 1.63
LMBR1-217ENST00000485985 ADD2P35612 726 aa25.25■■□□□ 1.63
LMBR1-217ENST00000485985 NBPF3Q9H094 633 aa25.25■■□□□ 1.63
LMBR1-217ENST00000485985 RBPJLQ9UBG7 517 aa25.25■■□□□ 1.63
LMBR1-217ENST00000485985 MNX1P50219 401 aaPredicted RBP25.24■■□□□ 1.63
LMBR1-217ENST00000485985 GABPAQ06546 454 aa25.24■■□□□ 1.63
LMBR1-217ENST00000485985 NUDT12Q9BQG2 462 aa25.24■■□□□ 1.63
LMBR1-217ENST00000485985 ARMT1Q9H993 441 aa25.24■■□□□ 1.63
LMBR1-217ENST00000485985 PARP14Q460N5 1801 aa25.23■■□□□ 1.63
LMBR1-217ENST00000485985 SOX1O00570 391 aaPredicted RBP25.23■■□□□ 1.63
LMBR1-217ENST00000485985 XRCC5P13010 732 aaKnown RBP25.23■■□□□ 1.63
LMBR1-217ENST00000485985 CERKLQ49MI3 558 aaPredicted RBP25.23■■□□□ 1.63
LMBR1-217ENST00000485985 MAP3K21Q5TCX8 1036 aa25.23■■□□□ 1.63
LMBR1-217ENST00000485985 C7orf61Q8IZ16 206 aa25.23■■□□□ 1.63
LMBR1-217ENST00000485985 DCP1AQ9NPI6 582 aaPredicted RBP25.23■■□□□ 1.63
LMBR1-217ENST00000485985 MCM9Q9NXL9 1143 aa25.23■■□□□ 1.63
LMBR1-217ENST00000485985 RLFQ13129 1914 aa25.23■■□□□ 1.63
LMBR1-217ENST00000485985 POLR3DP05423 398 aaPredicted RBP25.22■■□□□ 1.63
LMBR1-217ENST00000485985 CYP2D6P10635 497 aa25.22■■□□□ 1.63
LMBR1-217ENST00000485985 RAB3GAP1Q15042 981 aa25.22■■□□□ 1.63
LMBR1-217ENST00000485985 ZYXQ15942 572 aaKnown RBP25.22■■□□□ 1.63
LMBR1-217ENST00000485985 ABCB5Q2M3G0 1257 aa25.22■■□□□ 1.63
LMBR1-217ENST00000485985 Q3C1V9 767 aa25.22■■□□□ 1.63
LMBR1-217ENST00000485985 POTEEQ6S8J3 1075 aa25.22■■□□□ 1.63
LMBR1-217ENST00000485985 SOCS4Q8WXH5 440 aa25.22■■□□□ 1.63
LMBR1-217ENST00000485985 OGDHLQ9ULD0 1010 aa25.22■■□□□ 1.63
LMBR1-217ENST00000485985 PRKAB2O43741 272 aa25.21■■□□□ 1.63
LMBR1-217ENST00000485985 MBD4O95243 580 aa25.21■■□□□ 1.63
LMBR1-217ENST00000485985 PRKAR2AP13861 404 aaKnown RBP25.21■■□□□ 1.63
LMBR1-217ENST00000485985 MAPK4P31152 587 aa25.21■■□□□ 1.63
LMBR1-217ENST00000485985 GUCY1A2P33402 732 aa25.21■■□□□ 1.63
LMBR1-217ENST00000485985 USP17L2Q6R6M4 530 aa25.21■■□□□ 1.63
LMBR1-217ENST00000485985 ACER1Q8TDN7 264 aa25.21■■□□□ 1.63
LMBR1-217ENST00000485985 C12orf42Q96LP6 360 aa25.21■■□□□ 1.63
LMBR1-217ENST00000485985 FEZ1Q99689 392 aa25.21■■□□□ 1.63
LMBR1-217ENST00000485985 GDF15Q99988 308 aa25.21■■□□□ 1.63
LMBR1-217ENST00000485985 C11orf49Q9H6J7 331 aa25.21■■□□□ 1.63
LMBR1-217ENST00000485985 A0A0G2JMZ2 1700 aa25.2■■□□□ 1.63
LMBR1-217ENST00000485985 BMP8BP34820 402 aa25.2■■□□□ 1.62
LMBR1-217ENST00000485985 ERVK-9P63128 1117 aa25.2■■□□□ 1.62
LMBR1-217ENST00000485985 ERVK-24P63145 666 aa25.2■■□□□ 1.62
LMBR1-217ENST00000485985 TRMT44Q8IYL2 757 aaKnown RBP25.2■■□□□ 1.62
LMBR1-217ENST00000485985 GTF3C2Q8WUA4 911 aaPredicted RBP25.2■■□□□ 1.62
LMBR1-217ENST00000485985 USP6NLQ92738 828 aa25.2■■□□□ 1.62
LMBR1-217ENST00000485985 LRCH3Q96II8 777 aa25.2■■□□□ 1.62
LMBR1-217ENST00000485985 SLC44A5Q8NCS7 719 aa25.19■■□□□ 1.62
LMBR1-217ENST00000485985 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.19■■□□□ 1.623e-6■■■□□ 14.9
LMBR1-217ENST00000485985 KIAA1683Q9H0B3 1180 aa25.19■■□□□ 1.62
LMBR1-217ENST00000485985 PORCNQ9H237 461 aa25.19■■□□□ 1.62
LMBR1-217ENST00000485985 ZMYND8Q9ULU4 1186 aaPredicted RBP25.19■■□□□ 1.62
LMBR1-217ENST00000485985 GREB1LQ9C091 1923 aaPredicted RBP25.18■■□□□ 1.62
LMBR1-217ENST00000485985 SMIM22K7EJ46 135 aa25.18■■□□□ 1.62
LMBR1-217ENST00000485985 SEPT2Q15019 361 aa25.18■■□□□ 1.62
LMBR1-217ENST00000485985 GPR142Q7Z601 462 aa25.18■■□□□ 1.62
LMBR1-217ENST00000485985 CCAR1Q8IX12 1150 aaKnown RBP25.18■■□□□ 1.62
LMBR1-217ENST00000485985 PAGR1Q9BTK6 254 aa25.18■■□□□ 1.62
LMBR1-217ENST00000485985 DCTPP1Q9H773 170 aa25.18■■□□□ 1.62
LMBR1-217ENST00000485985 ZKSCAN1P17029 563 aaPredicted RBP25.17■■□□□ 1.62
LMBR1-217ENST00000485985 VCAM1P19320 739 aa25.17■■□□□ 1.62
LMBR1-217ENST00000485985 CACNB2Q08289 660 aaPredicted RBP25.17■■□□□ 1.62
LMBR1-217ENST00000485985 UBE3CQ15386 1083 aa25.17■■□□□ 1.62
LMBR1-217ENST00000485985 TSHZ3Q63HK5 1081 aa25.17■■□□□ 1.62
LMBR1-217ENST00000485985 CABP5Q9NP86 173 aa25.17■■□□□ 1.62
LMBR1-217ENST00000485985 ECHDC1Q9NTX5 307 aa25.17■■□□□ 1.62
LMBR1-217ENST00000485985 FRMPD3Q5JV73 1810 aa25.16■■□□□ 1.62
LMBR1-217ENST00000485985 RGS2P41220 211 aa25.16■■□□□ 1.62
LMBR1-217ENST00000485985 MORN1Q5T089 497 aa25.16■■□□□ 1.62
LMBR1-217ENST00000485985 PLEKHH3Q7Z736 793 aa25.16■■□□□ 1.62
LMBR1-217ENST00000485985 DYNLL2Q96FJ2 89 aa25.16■■□□□ 1.62
LMBR1-217ENST00000485985 LAMA3Q16787 3333 aa25.15■■□□□ 1.62
LMBR1-217ENST00000485985 COL11A1P12107 1806 aaPredicted RBP25.15■■□□□ 1.62
LMBR1-217ENST00000485985 CYP2D7A0A087X1C5 515 aa25.15■■□□□ 1.62
LMBR1-217ENST00000485985 SYN1P17600 705 aa25.15■■□□□ 1.62
LMBR1-217ENST00000485985 USP14P54578 494 aa25.15■■□□□ 1.62
LMBR1-217ENST00000485985 CCL14Q16627 93 aa25.15■■□□□ 1.62
LMBR1-217ENST00000485985 PUS7LQ9H0K6 701 aaKnown RBP25.15■■□□□ 1.62
LMBR1-217ENST00000485985 PCDHB15Q9Y5E8 787 aa25.15■■□□□ 1.62
LMBR1-217ENST00000485985 PFASO15067 1338 aa25.14■■□□□ 1.62
LMBR1-217ENST00000485985 A0A1W2PRG0 241 aa25.14■■□□□ 1.62
LMBR1-217ENST00000485985 USP17L15C9J2P7 530 aa25.14■■□□□ 1.62
LMBR1-217ENST00000485985 USP17L13C9JLJ4 530 aa25.14■■□□□ 1.62
LMBR1-217ENST00000485985 USP17L11C9JVI0 530 aa25.14■■□□□ 1.62
LMBR1-217ENST00000485985 USP17L18D6R9N7 530 aa25.14■■□□□ 1.62
LMBR1-217ENST00000485985 USP17L22D6RA61 530 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms