RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 PTH1RQ03431 593 aa14.06□□□□□ -0.16
HPS4-214ENST00000485842 MOGSQ13724 837 aa14.06□□□□□ -0.16
HPS4-214ENST00000485842 TAF1CQ15572 869 aaPredicted RBP14.06□□□□□ -0.16
HPS4-214ENST00000485842 RRP12Q5JTH9 1297 aaKnown RBP14.06□□□□□ -0.16
HPS4-214ENST00000485842 KIAA1211Q6ZU35 1233 aa14.06□□□□□ -0.16
HPS4-214ENST00000485842 FASTKD5Q7L8L6 764 aaKnown RBP14.06□□□□□ -0.16
HPS4-214ENST00000485842 ZNF444Q8N0Y2 327 aaPredicted RBP14.06□□□□□ -0.16
HPS4-214ENST00000485842 ACER1Q8TDN7 264 aa14.06□□□□□ -0.16
HPS4-214ENST00000485842 NBPF3Q9H094 633 aa14.06□□□□□ -0.16
HPS4-214ENST00000485842 SAGE1Q9NXZ1 904 aa14.06□□□□□ -0.16
HPS4-214ENST00000485842 CTNNA3Q9UI47 895 aa14.06□□□□□ -0.16
HPS4-214ENST00000485842 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.06□□□□□ -0.16
HPS4-214ENST00000485842 TACC3Q9Y6A5 838 aa14.06□□□□□ -0.16
HPS4-214ENST00000485842 ZNF213O14771 459 aa14.05□□□□□ -0.16
HPS4-214ENST00000485842 TSPY3P0CV98 308 aa14.05□□□□□ -0.16
HPS4-214ENST00000485842 TSPY8P0CW00 308 aa14.05□□□□□ -0.16
HPS4-214ENST00000485842 HSPA8P11142 646 aaKnown RBP14.05□□□□□ -0.16
HPS4-214ENST00000485842 CTCFP49711 727 aaPredicted RBP14.05□□□□□ -0.16
HPS4-214ENST00000485842 BACE1P56817 501 aa14.05□□□□□ -0.16
HPS4-214ENST00000485842 IMMTQ16891 758 aaKnown RBP14.05□□□□□ -0.16
HPS4-214ENST00000485842 FAM47AQ5JRC9 791 aa14.05□□□□□ -0.16
HPS4-214ENST00000485842 ANKRD23Q86SG2 305 aa14.05□□□□□ -0.16
HPS4-214ENST00000485842 TBC1D10CQ8IV04 446 aa14.05□□□□□ -0.16
HPS4-214ENST00000485842 ARHGEF10LQ9HCE6 1279 aa14.05□□□□□ -0.16
HPS4-214ENST00000485842 TMOD4Q9NZQ9 345 aa14.05□□□□□ -0.16
HPS4-214ENST00000485842 TSPY2A6NKD2 308 aa14.04□□□□□ -0.16
HPS4-214ENST00000485842 PDHXO00330 501 aa14.04□□□□□ -0.16
HPS4-214ENST00000485842 RANBP6O60518 1105 aaKnown RBP14.04□□□□□ -0.16
HPS4-214ENST00000485842 LBX1P52954 281 aa14.04□□□□□ -0.16
HPS4-214ENST00000485842 CRHR2Q13324 411 aa14.04□□□□□ -0.16
HPS4-214ENST00000485842 SH3D19Q5HYK7 790 aa14.04□□□□□ -0.16
HPS4-214ENST00000485842 AKNAD1Q5T1N1 836 aa14.04□□□□□ -0.16
HPS4-214ENST00000485842 TREML2Q5T2D2 321 aa14.04□□□□□ -0.16
HPS4-214ENST00000485842 GPAT2Q6NUI2 795 aa14.04□□□□□ -0.16
HPS4-214ENST00000485842 ANO2Q9NQ90 1003 aa14.04□□□□□ -0.16
HPS4-214ENST00000485842 U3KPZ7 1027 aaPredicted RBP14.04□□□□□ -0.16
HPS4-214ENST00000485842 A0A1W2PRG0 241 aa14.03□□□□□ -0.16
HPS4-214ENST00000485842 C19orf81C9J6K1 198 aa14.03□□□□□ -0.16
HPS4-214ENST00000485842 ORC4O43929 436 aa14.03□□□□□ -0.16
HPS4-214ENST00000485842 EEF2P13639 858 aaKnown RBP14.03□□□□□ -0.16
HPS4-214ENST00000485842 TFAP4Q01664 338 aa14.03□□□□□ -0.16
HPS4-214ENST00000485842 USP17L2Q6R6M4 530 aa14.03□□□□□ -0.16
HPS4-214ENST00000485842 MFSD6Q6ZSS7 791 aa14.03□□□□□ -0.16
HPS4-214ENST00000485842 PROCA1Q8NCQ7 364 aaPredicted RBP14.03□□□□□ -0.16
HPS4-214ENST00000485842 STAG1Q8WVM7 1258 aa14.03□□□□□ -0.16
HPS4-214ENST00000485842 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.03□□□□□ -0.16
HPS4-214ENST00000485842 LSG1Q9H089 658 aaKnown RBP14.03□□□□□ -0.16
HPS4-214ENST00000485842 R3HDMLQ9H3Y0 253 aa14.03□□□□□ -0.16
HPS4-214ENST00000485842 RNF41Q9H4P4 317 aaPredicted RBP14.03□□□□□ -0.16
HPS4-214ENST00000485842 KANSL2Q9H9L4 492 aa14.03□□□□□ -0.16
HPS4-214ENST00000485842 AGTPBP1Q9UPW5 1226 aa14.03□□□□□ -0.16
HPS4-214ENST00000485842 NEDD4P46934 1319 aa14.03□□□□□ -0.16
HPS4-214ENST00000485842 MYH4Q9Y623 1939 aa14.03□□□□□ -0.16
HPS4-214ENST00000485842 PLIN4Q96Q06 1357 aa14.02□□□□□ -0.17
HPS4-214ENST00000485842 RAD21O60216 631 aa14.02□□□□□ -0.17
HPS4-214ENST00000485842 USP14P54578 494 aa14.02□□□□□ -0.17
HPS4-214ENST00000485842 NEDD1Q8NHV4 660 aa14.02□□□□□ -0.17
HPS4-214ENST00000485842 PARK7Q99497 189 aaKnown RBP14.02□□□□□ -0.17
HPS4-214ENST00000485842 KIAA1683Q9H0B3 1180 aa14.02□□□□□ -0.17
HPS4-214ENST00000485842 SH2D4AQ9H788 454 aa14.02□□□□□ -0.17
HPS4-214ENST00000485842 ZFYVE28Q9HCC9 887 aa14.02□□□□□ -0.17
HPS4-214ENST00000485842 ZCCHC17Q9NP64 241 aaKnown RBP14.02□□□□□ -0.17
HPS4-214ENST00000485842 EMILIN3Q9NT22 766 aa14.02□□□□□ -0.17
HPS4-214ENST00000485842 RBM8AQ9Y5S9 174 aaKnown RBP14.02□□□□□ -0.17
HPS4-214ENST00000485842 IGKV6D-41A0A0C4DH26 115 aa14.01□□□□□ -0.17
HPS4-214ENST00000485842 FGRP09769 529 aa14.01□□□□□ -0.17
HPS4-214ENST00000485842 CYP2C8P10632 490 aa14.01□□□□□ -0.17
HPS4-214ENST00000485842 PABPC4Q13310 644 aaKnown RBP eCLIP14.01□□□□□ -0.17
HPS4-214ENST00000485842 SIAH1Q8IUQ4 282 aa14.01□□□□□ -0.17
HPS4-214ENST00000485842 MAP4K1Q92918 833 aa14.01□□□□□ -0.17
HPS4-214ENST00000485842 CEP95Q96GE4 821 aa14.01□□□□□ -0.17
HPS4-214ENST00000485842 C12orf42Q96LP6 360 aa14.01□□□□□ -0.17
HPS4-214ENST00000485842 CFHR5Q9BXR6 569 aa14.01□□□□□ -0.17
HPS4-214ENST00000485842 CASP8AP2Q9UKL3 1982 aa14□□□□□ -0.17
HPS4-214ENST00000485842 NMT2O60551 498 aa14□□□□□ -0.17
HPS4-214ENST00000485842 CYP21A2P08686 494 aa14□□□□□ -0.17
HPS4-214ENST00000485842 PCP11498 1178 aaKnown RBP14□□□□□ -0.17
HPS4-214ENST00000485842 VCAM1P19320 739 aa14□□□□□ -0.17
HPS4-214ENST00000485842 IRX3P78415 501 aaPredicted RBP14□□□□□ -0.17
HPS4-214ENST00000485842 SPICE1Q8N0Z3 855 aa14□□□□□ -0.17
HPS4-214ENST00000485842 SMCR8Q8TEV9 937 aaPredicted RBP14□□□□□ -0.17
HPS4-214ENST00000485842 ESR2Q92731 530 aa14□□□□□ -0.17
HPS4-214ENST00000485842 MTMR4Q9NYA4 1195 aa14□□□□□ -0.17
HPS4-214ENST00000485842 NYAP2Q9P242 653 aa14□□□□□ -0.17
HPS4-214ENST00000485842 CLIP2Q9UDT6 1046 aa14□□□□□ -0.17
HPS4-214ENST00000485842 PNMA3Q9UL41 463 aa14□□□□□ -0.17
HPS4-214ENST00000485842 STX8Q9UNK0 236 aa14□□□□□ -0.17
HPS4-214ENST00000485842 SLC45A1Q9Y2W3 748 aa14□□□□□ -0.17
HPS4-214ENST00000485842 TMX2Q9Y320 296 aa14□□□□□ -0.17
HPS4-214ENST00000485842 PCNTO95613 3336 aa13.99□□□□□ -0.17
HPS4-214ENST00000485842 B4E1Z4 1266 aa13.99□□□□□ -0.17
HPS4-214ENST00000485842 GPR25O00155 361 aa13.99□□□□□ -0.17
HPS4-214ENST00000485842 KDM4AO75164 1064 aa13.99□□□□□ -0.17
HPS4-214ENST00000485842 TTLL1O95922 423 aa13.99□□□□□ -0.17
HPS4-214ENST00000485842 OSBPP22059 807 aa13.99□□□□□ -0.17
HPS4-214ENST00000485842 KIAA1755Q5JYT7 1200 aa13.99□□□□□ -0.17
HPS4-214ENST00000485842 POTEDQ86YR6 584 aa13.99□□□□□ -0.17
HPS4-214ENST00000485842 LRRC47Q8N1G4 583 aaKnown RBP13.99□□□□□ -0.17
HPS4-214ENST00000485842 NKX2-3Q8TAU0 364 aa13.99□□□□□ -0.17
HPS4-214ENST00000485842 ASCC2Q9H1I8 757 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms