RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 USP17L11C9JVI0 530 aa19.13■□□□□ 0.65
SIK3-211ENST00000485363 USP17L18D6R9N7 530 aa19.13■□□□□ 0.65
SIK3-211ENST00000485363 USP17L22D6RA61 530 aa19.13■□□□□ 0.65
SIK3-211ENST00000485363 USP17L17D6RBQ6 530 aa19.13■□□□□ 0.65
SIK3-211ENST00000485363 USP17L19D6RCP7 530 aa19.13■□□□□ 0.65
SIK3-211ENST00000485363 USP17L20D6RJB6 530 aa19.13■□□□□ 0.65
SIK3-211ENST00000485363 INHAP05111 366 aa19.13■□□□□ 0.65
SIK3-211ENST00000485363 CYP2D6P10635 497 aa19.13■□□□□ 0.65
SIK3-211ENST00000485363 EVX2Q03828 476 aa19.13■□□□□ 0.65
SIK3-211ENST00000485363 USP17L24Q0WX57 530 aa19.13■□□□□ 0.65
SIK3-211ENST00000485363 SEPT2Q15019 361 aa19.13■□□□□ 0.65
SIK3-211ENST00000485363 ACER1Q8TDN7 264 aa19.13■□□□□ 0.65
SIK3-211ENST00000485363 UNC93B1Q9H1C4 597 aa19.13■□□□□ 0.65
SIK3-211ENST00000485363 TXNRD2Q9NNW7 524 aa19.13■□□□□ 0.65
SIK3-211ENST00000485363 PCDHB15Q9Y5E8 787 aa19.13■□□□□ 0.65
SIK3-211ENST00000485363 CHGBP05060 677 aa19.12■□□□□ 0.65
SIK3-211ENST00000485363 GUCY1A2P33402 732 aa19.12■□□□□ 0.65
SIK3-211ENST00000485363 SHISA4Q96DD7 197 aa19.12■□□□□ 0.65
SIK3-211ENST00000485363 RBPJLQ9UBG7 517 aa19.12■□□□□ 0.65
SIK3-211ENST00000485363 SLC4A4Q9Y6R1 1079 aa19.12■□□□□ 0.65
SIK3-211ENST00000485363 VCAM1P19320 739 aa19.11■□□□□ 0.65
SIK3-211ENST00000485363 ERVK-9P63128 1117 aa19.11■□□□□ 0.65
SIK3-211ENST00000485363 ERVK-24P63145 666 aa19.11■□□□□ 0.65
SIK3-211ENST00000485363 CATSPERGQ6ZRH7 1159 aa19.11■□□□□ 0.65
SIK3-211ENST00000485363 TMEM179Q6ZVK1 233 aa19.11■□□□□ 0.65
SIK3-211ENST00000485363 CCAR1Q8IX12 1150 aaKnown RBP19.11■□□□□ 0.65
SIK3-211ENST00000485363 KBTBD3Q8NAB2 608 aa19.11■□□□□ 0.65
SIK3-211ENST00000485363 SLC44A5Q8NCS7 719 aa19.11■□□□□ 0.65
SIK3-211ENST00000485363 DYNLL2Q96FJ2 89 aa19.11■□□□□ 0.65
SIK3-211ENST00000485363 PAGR1Q9BTK6 254 aa19.11■□□□□ 0.65
SIK3-211ENST00000485363 PUS7LQ9H0K6 701 aaKnown RBP19.11■□□□□ 0.65
SIK3-211ENST00000485363 GJD2Q9UKL4 321 aa19.11■□□□□ 0.65
SIK3-211ENST00000485363 PLXNB2O15031 1838 aa19.1■□□□□ 0.65
SIK3-211ENST00000485363 USP17L12C9JPN9 530 aa19.1■□□□□ 0.65
SIK3-211ENST00000485363 USP17L21D6R901 530 aa19.1■□□□□ 0.65
SIK3-211ENST00000485363 PEX10O60683 326 aa19.1■□□□□ 0.65
SIK3-211ENST00000485363 MAPK4P31152 587 aa19.1■□□□□ 0.65
SIK3-211ENST00000485363 C12orf60Q5U649 245 aa19.1■□□□□ 0.65
SIK3-211ENST00000485363 TSHZ3Q63HK5 1081 aa19.1■□□□□ 0.65
SIK3-211ENST00000485363 U2AF1L4Q8WU68 220 aaKnown RBP19.1■□□□□ 0.65
SIK3-211ENST00000485363 HMGCRP04035 888 aa19.09■□□□□ 0.65
SIK3-211ENST00000485363 CAPN2P17655 700 aa19.09■□□□□ 0.65
SIK3-211ENST00000485363 Q3C1V9 767 aa19.09■□□□□ 0.65
SIK3-211ENST00000485363 SOCS4Q8WXH5 440 aa19.09■□□□□ 0.65
SIK3-211ENST00000485363 NUDT12Q9BQG2 462 aa19.09■□□□□ 0.65
SIK3-211ENST00000485363 RABGAP1Q9Y3P9 1069 aa19.09■□□□□ 0.65
SIK3-211ENST00000485363 TTC41PQ6P2S7 1318 aa19.08■□□□□ 0.65
SIK3-211ENST00000485363 SGPL1O95470 568 aa19.08■□□□□ 0.64
SIK3-211ENST00000485363 ZFYP08048 801 aaPredicted RBP19.08■□□□□ 0.64
SIK3-211ENST00000485363 GCC1Q96CN9 775 aa19.08■□□□□ 0.64
SIK3-211ENST00000485363 CCDC17Q96LX7 622 aa19.08■□□□□ 0.64
SIK3-211ENST00000485363 RPAP3Q9H6T3 665 aaPredicted RBP19.08■□□□□ 0.64
SIK3-211ENST00000485363 CYP2D7A0A087X1C5 515 aa19.07■□□□□ 0.64
SIK3-211ENST00000485363 A0A1W2PRG0 241 aa19.07■□□□□ 0.64
SIK3-211ENST00000485363 ERC2O15083 957 aa19.07■□□□□ 0.64
SIK3-211ENST00000485363 RNF113AO15541 343 aaKnown RBP19.07■□□□□ 0.64
SIK3-211ENST00000485363 CYP2B6P20813 491 aa19.07■□□□□ 0.64
SIK3-211ENST00000485363 CDK8P49336 464 aa19.07■□□□□ 0.64
SIK3-211ENST00000485363 CCNA1P78396 465 aa19.07■□□□□ 0.64
SIK3-211ENST00000485363 LRRFIP1Q32MZ4 808 aaKnown RBP19.07■□□□□ 0.64
SIK3-211ENST00000485363 CTR9Q6PD62 1173 aa19.07■□□□□ 0.64
SIK3-211ENST00000485363 POTEEQ6S8J3 1075 aa19.07■□□□□ 0.64
SIK3-211ENST00000485363 LBX2Q6XYB7 198 aa19.07■□□□□ 0.64
SIK3-211ENST00000485363 C16orf86Q6ZW13 317 aa19.07■□□□□ 0.64
SIK3-211ENST00000485363 APPBP2Q92624 585 aa19.07■□□□□ 0.64
SIK3-211ENST00000485363 YTHDC1Q96MU7 727 aaKnown RBP19.07■□□□□ 0.64
SIK3-211ENST00000485363 DEFB118Q96PH6 123 aa19.07■□□□□ 0.64
SIK3-211ENST00000485363 STRBPQ96SI9 672 aaKnown RBP19.07■□□□□ 0.64
SIK3-211ENST00000485363 PORCNQ9H237 461 aa19.07■□□□□ 0.64
SIK3-211ENST00000485363 SH2D4AQ9H788 454 aa19.07■□□□□ 0.64
SIK3-211ENST00000485363 ARHGEF10LQ9HCE6 1279 aa19.07■□□□□ 0.64
SIK3-211ENST00000485363 CWC22Q9HCG8 908 aaKnown RBP19.07■□□□□ 0.64
SIK3-211ENST00000485363 PAK6Q9NQU5 681 aaPredicted RBP19.07■□□□□ 0.64
SIK3-211ENST00000485363 ARPP21Q9UBL0 812 aaPredicted RBP19.07■□□□□ 0.64
SIK3-211ENST00000485363 SLC34A2O95436 690 aa19.06■□□□□ 0.64
SIK3-211ENST00000485363 XRCC5P13010 732 aaKnown RBP19.06■□□□□ 0.64
SIK3-211ENST00000485363 AKR1B1P15121 316 aa19.06■□□□□ 0.64
SIK3-211ENST00000485363 GPR142Q7Z601 462 aa19.06■□□□□ 0.64
SIK3-211ENST00000485363 PLEKHH3Q7Z736 793 aa19.06■□□□□ 0.64
SIK3-211ENST00000485363 CRBNQ96SW2 442 aa19.06■□□□□ 0.64
SIK3-211ENST00000485363 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.06■□□□□ 0.641e-6■■■■■ 43.7
SIK3-211ENST00000485363 ZBTB47Q9UFB7 747 aaPredicted RBP19.06■□□□□ 0.64
SIK3-211ENST00000485363 SMIM22K7EJ46 135 aa19.05■□□□□ 0.64
SIK3-211ENST00000485363 CNMDO75829 334 aa19.05■□□□□ 0.64
SIK3-211ENST00000485363 GLRX3O76003 335 aaKnown RBP19.05■□□□□ 0.64
SIK3-211ENST00000485363 FARP2O94887 1054 aaPredicted RBP19.05■□□□□ 0.64
SIK3-211ENST00000485363 TFRCP02786 760 aaKnown RBP19.05■□□□□ 0.64
SIK3-211ENST00000485363 ICA1Q05084 483 aa19.05■□□□□ 0.64
SIK3-211ENST00000485363 GIMAP6Q6P9H5 292 aa19.05■□□□□ 0.64
SIK3-211ENST00000485363 UBE2Q1Q7Z7E8 422 aa19.05■□□□□ 0.64
SIK3-211ENST00000485363 TRMT44Q8IYL2 757 aaKnown RBP19.05■□□□□ 0.64
SIK3-211ENST00000485363 TRIB2Q92519 343 aa19.05■□□□□ 0.64
SIK3-211ENST00000485363 OSBP2Q969R2 916 aa19.05■□□□□ 0.64
SIK3-211ENST00000485363 HTATIP2Q9BUP3 242 aa19.05■□□□□ 0.64
SIK3-211ENST00000485363 TMX2Q9Y320 296 aa19.05■□□□□ 0.64
SIK3-211ENST00000485363 RPTORQ8N122 1335 aa19.04■□□□□ 0.64
SIK3-211ENST00000485363 SPDYE16A6NNV3 312 aaPredicted RBP19.04■□□□□ 0.64
SIK3-211ENST00000485363 GNAT2P19087 354 aa19.04■□□□□ 0.64
SIK3-211ENST00000485363 RGS2P41220 211 aa19.04■□□□□ 0.64
SIK3-211ENST00000485363 COG2Q14746 738 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms