RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 TBC1D12O60347 775 aa17.05■□□□□ 0.32
LRIF1-202ENST00000485275 JAK2O60674 1132 aa17.05■□□□□ 0.32
LRIF1-202ENST00000485275 HSP90AA1P07900 732 aaKnown RBP17.05■□□□□ 0.32
LRIF1-202ENST00000485275 POTEIP0CG38 1075 aa17.05■□□□□ 0.32
LRIF1-202ENST00000485275 POTEJP0CG39 1038 aa17.05■□□□□ 0.32
LRIF1-202ENST00000485275 TROAPQ12815 778 aa17.05■□□□□ 0.32
LRIF1-202ENST00000485275 CERKLQ49MI3 558 aaPredicted RBP17.05■□□□□ 0.32
LRIF1-202ENST00000485275 ANKS1AQ92625 1134 aa17.05■□□□□ 0.32
LRIF1-202ENST00000485275 FZD1Q9UP38 647 aa17.05■□□□□ 0.32
LRIF1-202ENST00000485275 CCDC69A6NI79 296 aa17.04■□□□□ 0.32
LRIF1-202ENST00000485275 PPFIA3O75145 1194 aa17.04■□□□□ 0.32
LRIF1-202ENST00000485275 USP50Q70EL3 339 aaPredicted RBP17.04■□□□□ 0.32
LRIF1-202ENST00000485275 DGKHQ86XP1 1220 aa17.04■□□□□ 0.32
LRIF1-202ENST00000485275 TMEM47Q9BQJ4 181 aa17.04■□□□□ 0.32
LRIF1-202ENST00000485275 MTMR4Q9NYA4 1195 aa17.04■□□□□ 0.32
LRIF1-202ENST00000485275 STX8Q9UNK0 236 aa17.04■□□□□ 0.32
LRIF1-202ENST00000485275 SLC12A7Q9Y666 1083 aa17.04■□□□□ 0.32
LRIF1-202ENST00000485275 PHF20L1A8MW92 1017 aa17.03■□□□□ 0.32
LRIF1-202ENST00000485275 ZBTB43O43298 467 aa17.03■□□□□ 0.32
LRIF1-202ENST00000485275 NSUN7Q8NE18 718 aaKnown RBP17.03■□□□□ 0.32
LRIF1-202ENST00000485275 TRIM34Q9BYJ4 488 aa17.03■□□□□ 0.32
LRIF1-202ENST00000485275 TAOK2Q9UL54 1235 aa17.03■□□□□ 0.32
LRIF1-202ENST00000485275 OTOFQ9HC10 1997 aa17.03■□□□□ 0.32
LRIF1-202ENST00000485275 MPHOSPH10O00566 681 aaKnown RBP17.02■□□□□ 0.32
LRIF1-202ENST00000485275 GH2P01242 217 aa17.02■□□□□ 0.32
LRIF1-202ENST00000485275 ADD1P35611 737 aaKnown RBP17.02■□□□□ 0.32
LRIF1-202ENST00000485275 METAP2P50579 478 aaKnown RBP eCLIP17.02■□□□□ 0.32
LRIF1-202ENST00000485275 PKP1Q13835 747 aa17.02■□□□□ 0.32
LRIF1-202ENST00000485275 SIAH1Q8IUQ4 282 aa17.02■□□□□ 0.32
LRIF1-202ENST00000485275 CCDC17Q96LX7 622 aa17.02■□□□□ 0.32
LRIF1-202ENST00000485275 DOCK1Q14185 1865 aa17.02■□□□□ 0.31
LRIF1-202ENST00000485275 GOLGA8AA7E2F4 631 aa17.02■□□□□ 0.31
LRIF1-202ENST00000485275 SEPT2Q15019 361 aa17.02■□□□□ 0.31
LRIF1-202ENST00000485275 TMTC2Q8N394 836 aa17.02■□□□□ 0.31
LRIF1-202ENST00000485275 IQCA1LA6NCM1 817 aa17.01■□□□□ 0.31
LRIF1-202ENST00000485275 NTRK3Q16288 839 aa17.01■□□□□ 0.31
LRIF1-202ENST00000485275 ABCB5Q2M3G0 1257 aa17.01■□□□□ 0.31
LRIF1-202ENST00000485275 EAPPQ56P03 285 aaPredicted RBP17.01■□□□□ 0.31
LRIF1-202ENST00000485275 LRRC47Q8N1G4 583 aaKnown RBP17.01■□□□□ 0.31
LRIF1-202ENST00000485275 PNMA1Q8ND90 353 aa17.01■□□□□ 0.31
LRIF1-202ENST00000485275 SMARCC2Q8TAQ2 1214 aa17.01■□□□□ 0.31
LRIF1-202ENST00000485275 NUP133Q8WUM0 1156 aa17.01■□□□□ 0.31
LRIF1-202ENST00000485275 DDAH1O94760 285 aa17■□□□□ 0.31
LRIF1-202ENST00000485275 TMEM179Q6ZVK1 233 aa17■□□□□ 0.31
LRIF1-202ENST00000485275 CMTR1Q8N1G2 835 aaKnown RBP17■□□□□ 0.31
LRIF1-202ENST00000485275 CHMP4CQ96CF2 233 aa17■□□□□ 0.31
LRIF1-202ENST00000485275 ZBTB21Q9ULJ3 1066 aa17■□□□□ 0.31
LRIF1-202ENST00000485275 PPP2R3BQ9Y5P8 575 aa17■□□□□ 0.31
LRIF1-202ENST00000485275 PTPDC1A2A3K4 754 aa17■□□□□ 0.31
LRIF1-202ENST00000485275 UBE2Q2LH0YL09 131 aa17■□□□□ 0.31
LRIF1-202ENST00000485275 GJB2P29033 226 aa17■□□□□ 0.31
LRIF1-202ENST00000485275 CAP2P40123 477 aa17■□□□□ 0.31
LRIF1-202ENST00000485275 RCAN1P53805 252 aa17■□□□□ 0.31
LRIF1-202ENST00000485275 CATIPQ7Z7H3 387 aa17■□□□□ 0.31
LRIF1-202ENST00000485275 CCDC84Q86UT8 332 aaPredicted RBP17■□□□□ 0.31
LRIF1-202ENST00000485275 DCPSQ96C86 337 aaKnown RBP17■□□□□ 0.31
LRIF1-202ENST00000485275 KAT14Q9H8E8 782 aa17■□□□□ 0.31
LRIF1-202ENST00000485275 TTLL1O95922 423 aa16.99■□□□□ 0.31
LRIF1-202ENST00000485275 EEF2P13639 858 aaKnown RBP16.99■□□□□ 0.31
LRIF1-202ENST00000485275 FDPSP14324 419 aaKnown RBP16.99■□□□□ 0.31
LRIF1-202ENST00000485275 RAB3GAP1Q15042 981 aa16.99■□□□□ 0.31
LRIF1-202ENST00000485275 RTN1Q16799 776 aa16.99■□□□□ 0.31
LRIF1-202ENST00000485275 CCDC178Q5BJE1 867 aa16.99■□□□□ 0.31
LRIF1-202ENST00000485275 KRT26Q7Z3Y9 468 aa16.99■□□□□ 0.31
LRIF1-202ENST00000485275 FANCBQ8NB91 859 aa16.99■□□□□ 0.31
LRIF1-202ENST00000485275 ZC3H15Q8WU90 426 aaKnown RBP16.99■□□□□ 0.31
LRIF1-202ENST00000485275 CLIP2Q9UDT6 1046 aa16.99■□□□□ 0.31
LRIF1-202ENST00000485275 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.99■□□□□ 0.31
LRIF1-202ENST00000485275 PHIPQ8WWQ0 1821 aa16.98■□□□□ 0.31
LRIF1-202ENST00000485275 A0A1W2PRG0 241 aa16.98■□□□□ 0.31
LRIF1-202ENST00000485275 PLEKHA8P1O95397 391 aa16.98■□□□□ 0.31
LRIF1-202ENST00000485275 TOP1P11387 765 aaKnown RBP16.98■□□□□ 0.31
LRIF1-202ENST00000485275 INPP5BP32019 993 aa16.98■□□□□ 0.31
LRIF1-202ENST00000485275 ICA1Q05084 483 aa16.98■□□□□ 0.31
LRIF1-202ENST00000485275 SLC35G1Q2M3R5 365 aa16.98■□□□□ 0.31
LRIF1-202ENST00000485275 SULF1Q8IWU6 871 aa16.98■□□□□ 0.31
LRIF1-202ENST00000485275 DDX11Q96FC9 970 aa16.98■□□□□ 0.31
LRIF1-202ENST00000485275 GLIS2Q9BZE0 524 aaPredicted RBP16.98■□□□□ 0.31
LRIF1-202ENST00000485275 RRAGCQ9HB90 399 aa16.98■□□□□ 0.31
LRIF1-202ENST00000485275 NMRK2Q9NPI5 230 aa16.98■□□□□ 0.31
LRIF1-202ENST00000485275 SMC3Q9UQE7 1217 aa16.98■□□□□ 0.31
LRIF1-202ENST00000485275 MTMR7Q9Y216 660 aa16.98■□□□□ 0.31
LRIF1-202ENST00000485275 FUT2Q10981 343 aa16.97■□□□□ 0.31
LRIF1-202ENST00000485275 SYNE3Q6ZMZ3 975 aa16.97■□□□□ 0.31
LRIF1-202ENST00000485275 NBPF11Q86T75 865 aa16.97■□□□□ 0.31
LRIF1-202ENST00000485275 USP48Q86UV5 1035 aa16.97■□□□□ 0.31
LRIF1-202ENST00000485275 STAG2Q8N3U4 1231 aa16.97■□□□□ 0.31
LRIF1-202ENST00000485275 ZNF526Q8TF50 670 aaPredicted RBP16.97■□□□□ 0.31
LRIF1-202ENST00000485275 PHKBQ93100 1093 aa16.97■□□□□ 0.31
LRIF1-202ENST00000485275 LLPHQ9BRT6 129 aaKnown RBP16.97■□□□□ 0.31
LRIF1-202ENST00000485275 KANSL2Q9H9L4 492 aa16.97■□□□□ 0.31
LRIF1-202ENST00000485275 NYAP2Q9P242 653 aa16.97■□□□□ 0.31
LRIF1-202ENST00000485275 MAD2L2Q9UI95 211 aa16.97■□□□□ 0.31
LRIF1-202ENST00000485275 ZNF112Q9UJU3 913 aa16.97■□□□□ 0.31
LRIF1-202ENST00000485275 ZDHHC9Q9Y397 364 aa16.97■□□□□ 0.31
LRIF1-202ENST00000485275 PDHBP11177 359 aa16.96■□□□□ 0.31
LRIF1-202ENST00000485275 ECE1P42892 770 aa16.96■□□□□ 0.31
LRIF1-202ENST00000485275 ATP2B2Q01814 1243 aa16.96■□□□□ 0.31
LRIF1-202ENST00000485275 FMR1Q06787 632 aaKnown RBP eCLIP16.96■□□□□ 0.31
LRIF1-202ENST00000485275 GRM4Q14833 912 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms