RNA–Protein interactions for RNA: ENST00000485036.5

TNFRSF25-215, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-215ENST00000485036 WASF1Q92558 559 aa29.4■■■□□ 2.3
TNFRSF25-215ENST00000485036 RNF26Q9BY78 433 aaPredicted RBP29.4■■■□□ 2.3
TNFRSF25-215ENST00000485036 SHMT1P34896 483 aa29.39■■■□□ 2.3
TNFRSF25-215ENST00000485036 GUCY1B3Q02153 619 aa29.39■■■□□ 2.3
TNFRSF25-215ENST00000485036 CSPP1Q1MSJ5 1256 aa29.39■■■□□ 2.3
TNFRSF25-215ENST00000485036 FAM173BQ6P4H8 233 aa29.39■■■□□ 2.3
TNFRSF25-215ENST00000485036 PNMA1Q8ND90 353 aa29.39■■■□□ 2.3
TNFRSF25-215ENST00000485036 DEXIO95424 95 aa29.38■■■□□ 2.29
TNFRSF25-215ENST00000485036 TMTC3Q6ZXV5 915 aa29.38■■■□□ 2.29
TNFRSF25-215ENST00000485036 SH3BP5LQ7L8J4 393 aa29.38■■■□□ 2.29
TNFRSF25-215ENST00000485036 CTCFLQ8NI51 663 aaPredicted RBP29.38■■■□□ 2.29
TNFRSF25-215ENST00000485036 AIFM3Q96NN9 605 aa29.38■■■□□ 2.29
TNFRSF25-215ENST00000485036 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.37■■■□□ 2.29
TNFRSF25-215ENST00000485036 IGKV6D-41A0A0C4DH26 115 aa29.37■■■□□ 2.29
TNFRSF25-215ENST00000485036 DDTLA6NHG4 134 aaPredicted RBP29.37■■■□□ 2.29
TNFRSF25-215ENST00000485036 NCLP19338 710 aaKnown RBP29.37■■■□□ 2.29
TNFRSF25-215ENST00000485036 MMP14P50281 582 aa29.37■■■□□ 2.29
TNFRSF25-215ENST00000485036 TCP10Q12799 353 aa29.37■■■□□ 2.29
TNFRSF25-215ENST00000485036 DLGAP5Q15398 846 aa29.37■■■□□ 2.29
TNFRSF25-215ENST00000485036 OTUD7BQ6GQQ9 843 aa29.37■■■□□ 2.29
TNFRSF25-215ENST00000485036 GPT2Q8TD30 523 aa29.37■■■□□ 2.29
TNFRSF25-215ENST00000485036 FIBPO43427 364 aa29.36■■■□□ 2.29
TNFRSF25-215ENST00000485036 MBD3O95983 291 aa29.36■■■□□ 2.29
TNFRSF25-215ENST00000485036 RASSF7Q02833 373 aa29.36■■■□□ 2.29
TNFRSF25-215ENST00000485036 METTL16Q86W50 562 aaKnown RBP29.36■■■□□ 2.29
TNFRSF25-215ENST00000485036 TMEM47Q9BQJ4 181 aa29.36■■■□□ 2.29
TNFRSF25-215ENST00000485036 DNAJC18Q9H819 358 aa29.36■■■□□ 2.29
TNFRSF25-215ENST00000485036 PI4KBQ9UBF8 816 aa29.36■■■□□ 2.29
TNFRSF25-215ENST00000485036 ELP1O95163 1332 aa29.35■■■□□ 2.29
TNFRSF25-215ENST00000485036 PLEKHA8P1O95397 391 aa29.35■■■□□ 2.29
TNFRSF25-215ENST00000485036 PRELPP51888 382 aa29.35■■■□□ 2.29
TNFRSF25-215ENST00000485036 TNIP1Q15025 636 aa29.35■■■□□ 2.29
TNFRSF25-215ENST00000485036 CMTR1Q8N1G2 835 aaKnown RBP29.35■■■□□ 2.29
TNFRSF25-215ENST00000485036 CEP95Q96GE4 821 aa29.35■■■□□ 2.29
TNFRSF25-215ENST00000485036 ZBED3Q96IU2 234 aaPredicted RBP29.35■■■□□ 2.29
TNFRSF25-215ENST00000485036 GJB4Q9NTQ9 266 aa29.35■■■□□ 2.29
TNFRSF25-215ENST00000485036 CNTNAP5Q8WYK1 1306 aa29.35■■■□□ 2.29
TNFRSF25-215ENST00000485036 KIF5BP33176 963 aa29.34■■■□□ 2.29
TNFRSF25-215ENST00000485036 GUCY1A2P33402 732 aa29.34■■■□□ 2.29
TNFRSF25-215ENST00000485036 KRT40Q6A162 431 aa29.34■■■□□ 2.29
TNFRSF25-215ENST00000485036 TMOD2Q9NZR1 351 aa29.34■■■□□ 2.29
TNFRSF25-215ENST00000485036 STX8Q9UNK0 236 aa29.34■■■□□ 2.29
TNFRSF25-215ENST00000485036 DICER1Q9UPY3 1922 aaKnown RBP29.34■■■□□ 2.29
TNFRSF25-215ENST00000485036 UBE2Q2LH0YL09 131 aa29.34■■■□□ 2.29
TNFRSF25-215ENST00000485036 PRPF3O43395 683 aaKnown RBP29.34■■■□□ 2.29
TNFRSF25-215ENST00000485036 AKR1B1P15121 316 aa29.34■■■□□ 2.29
TNFRSF25-215ENST00000485036 GRM4Q14833 912 aa29.34■■■□□ 2.29
TNFRSF25-215ENST00000485036 SPDYE2Q495Y8 402 aa29.34■■■□□ 2.29
TNFRSF25-215ENST00000485036 ATL3Q6DD88 541 aa29.34■■■□□ 2.29
TNFRSF25-215ENST00000485036 SCAND2PQ9GZW5 306 aaPredicted RBP29.34■■■□□ 2.29
TNFRSF25-215ENST00000485036 RPS12P25398 132 aaKnown RBP29.33■■■□□ 2.29
TNFRSF25-215ENST00000485036 KIF23Q02241 960 aaPredicted RBP29.33■■■□□ 2.29
TNFRSF25-215ENST00000485036 GSE1Q14687 1217 aa29.33■■■□□ 2.29
TNFRSF25-215ENST00000485036 BRAPQ7Z569 592 aa29.33■■■□□ 2.29
TNFRSF25-215ENST00000485036 ZNF70Q9UC06 446 aaPredicted RBP29.33■■■□□ 2.29
TNFRSF25-215ENST00000485036 FZD9O00144 591 aa29.32■■■□□ 2.28
TNFRSF25-215ENST00000485036 TOP1P11387 765 aaKnown RBP29.32■■■□□ 2.28
TNFRSF25-215ENST00000485036 FKBP1CQ5VVH2 108 aa29.32■■■□□ 2.28
TNFRSF25-215ENST00000485036 FOXP4Q8IVH2 680 aaPredicted RBP29.32■■■□□ 2.28
TNFRSF25-215ENST00000485036 CCDC82Q8N4S0 544 aa29.32■■■□□ 2.28
TNFRSF25-215ENST00000485036 CCDC17Q96LX7 622 aa29.32■■■□□ 2.28
TNFRSF25-215ENST00000485036 MTMR4Q9NYA4 1195 aa29.32■■■□□ 2.28
TNFRSF25-215ENST00000485036 GADD45BO75293 160 aaPredicted RBP29.31■■■□□ 2.28
TNFRSF25-215ENST00000485036 TRIM29Q14134 588 aa29.31■■■□□ 2.28
TNFRSF25-215ENST00000485036 SRBD1Q8N5C6 995 aaKnown RBP29.31■■■□□ 2.28
TNFRSF25-215ENST00000485036 UBE2HP62256 183 aa29.31■■■□□ 2.28
TNFRSF25-215ENST00000485036 ZNF280AP59817 542 aaPredicted RBP29.3■■■□□ 2.28
TNFRSF25-215ENST00000485036 PKN1Q16512 942 aa29.3■■■□□ 2.28
TNFRSF25-215ENST00000485036 TATDN1Q6P1N9 297 aa29.3■■■□□ 2.28
TNFRSF25-215ENST00000485036 ZSCAN29Q8IWY8 852 aaPredicted RBP29.3■■■□□ 2.28
TNFRSF25-215ENST00000485036 MAD2L2Q9UI95 211 aa29.3■■■□□ 2.28
TNFRSF25-215ENST00000485036 CFAP45Q9UL16 551 aa29.3■■■□□ 2.28
TNFRSF25-215ENST00000485036 MYH4Q9Y623 1939 aa29.29■■■□□ 2.28
TNFRSF25-215ENST00000485036 KIF28PB7ZC32 967 aa29.29■■■□□ 2.28
TNFRSF25-215ENST00000485036 AKAP17AQ02040 695 aaKnown RBP29.29■■■□□ 2.28
TNFRSF25-215ENST00000485036 CNTNAP1P78357 1384 aa29.29■■■□□ 2.28
TNFRSF25-215ENST00000485036 GNAQP50148 359 aa29.28■■■□□ 2.28
TNFRSF25-215ENST00000485036 LEO1Q8WVC0 666 aaPredicted RBP29.28■■■□□ 2.28
TNFRSF25-215ENST00000485036 FAM151AQ8WW52 585 aa29.28■■■□□ 2.28
TNFRSF25-215ENST00000485036 FHDC1Q9C0D6 1143 aaPredicted RBP29.28■■■□□ 2.28
TNFRSF25-215ENST00000485036 CLRN2A0PK11 232 aa29.28■■■□□ 2.28
TNFRSF25-215ENST00000485036 SPATA32Q96LK8 384 aa29.28■■■□□ 2.28
TNFRSF25-215ENST00000485036 ZNF396Q96N95 335 aaPredicted RBP29.28■■■□□ 2.28
TNFRSF25-215ENST00000485036 GZF1Q9H116 711 aaPredicted RBP29.28■■■□□ 2.28
TNFRSF25-215ENST00000485036 RBM27Q9P2N5 1060 aaKnown RBP29.28■■■□□ 2.28
TNFRSF25-215ENST00000485036 TFIP11Q9UBB9 837 aaKnown RBP29.28■■■□□ 2.28
TNFRSF25-215ENST00000485036 PALM3A6NDB9 673 aaPredicted RBP29.27■■■□□ 2.28
TNFRSF25-215ENST00000485036 MMP1P03956 469 aa29.27■■■□□ 2.28
TNFRSF25-215ENST00000485036 U2AF2P26368 475 aaKnown RBP eCLIP29.27■■■□□ 2.28
TNFRSF25-215ENST00000485036 MYOZ2Q9NPC6 264 aa29.27■■■□□ 2.28
TNFRSF25-215ENST00000485036 SBF1O95248 1867 aa29.27■■■□□ 2.28
TNFRSF25-215ENST00000485036 SLURP2P0DP57 97 aa29.26■■■□□ 2.27
TNFRSF25-215ENST00000485036 EIF6P56537 245 aaKnown RBP29.26■■■□□ 2.27
TNFRSF25-215ENST00000485036 PPP4R3BQ5MIZ7 849 aa29.26■■■□□ 2.27
TNFRSF25-215ENST00000485036 DPF2Q92785 391 aa29.26■■■□□ 2.27
TNFRSF25-215ENST00000485036 V9GY48 417 aaPredicted RBP29.26■■■□□ 2.27
TNFRSF25-215ENST00000485036 TCP10L2B9ZVM9 353 aa29.25■■■□□ 2.27
TNFRSF25-215ENST00000485036 WNT10BO00744 389 aa29.25■■■□□ 2.27
TNFRSF25-215ENST00000485036 MYSM1Q5VVJ2 828 aa29.25■■■□□ 2.27
TNFRSF25-215ENST00000485036 FAM83AQ86UY5 434 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms