RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 TMEM67Q5HYA8 995 aa16.39■□□□□ 0.21
SMAD9-204ENST00000483941 BRF1Q92994 677 aa16.39■□□□□ 0.21
SMAD9-204ENST00000483941 CLRN2A0PK11 232 aa16.38■□□□□ 0.21
SMAD9-204ENST00000483941 UBE2Q2LH0YL09 131 aa16.38■□□□□ 0.21
SMAD9-204ENST00000483941 TSPY3P0CV98 308 aa16.38■□□□□ 0.21
SMAD9-204ENST00000483941 TSPY8P0CW00 308 aa16.38■□□□□ 0.21
SMAD9-204ENST00000483941 PDIA4P13667 645 aaKnown RBP16.38■□□□□ 0.21
SMAD9-204ENST00000483941 RCAN1P53805 252 aa16.38■□□□□ 0.21
SMAD9-204ENST00000483941 EVCP57679 992 aa16.38■□□□□ 0.21
SMAD9-204ENST00000483941 TCP10Q12799 353 aa16.38■□□□□ 0.21
SMAD9-204ENST00000483941 TOB2Q14106 344 aaPredicted RBP16.38■□□□□ 0.21
SMAD9-204ENST00000483941 WTAPQ15007 396 aa16.38■□□□□ 0.21
SMAD9-204ENST00000483941 NFXL1Q6ZNB6 911 aa16.38■□□□□ 0.21
SMAD9-204ENST00000483941 ZSCAN10Q96SZ4 725 aaPredicted RBP16.38■□□□□ 0.21
SMAD9-204ENST00000483941 TCP11L1Q9NUJ3 509 aa16.38■□□□□ 0.21
SMAD9-204ENST00000483941 LAMB1P07942 1786 aa16.38■□□□□ 0.21
SMAD9-204ENST00000483941 CCDC69A6NI79 296 aa16.37■□□□□ 0.21
SMAD9-204ENST00000483941 TCP10L2B9ZVM9 353 aa16.37■□□□□ 0.21
SMAD9-204ENST00000483941 SH2B2O14492 632 aaPredicted RBP16.37■□□□□ 0.21
SMAD9-204ENST00000483941 CD2BP2O95400 341 aaKnown RBP16.37■□□□□ 0.21
SMAD9-204ENST00000483941 TM4SF4P48230 202 aa16.37■□□□□ 0.21
SMAD9-204ENST00000483941 GABPAQ06546 454 aa16.37■□□□□ 0.21
SMAD9-204ENST00000483941 SREBF2Q12772 1141 aa16.37■□□□□ 0.21
SMAD9-204ENST00000483941 TTLL12Q14166 644 aaPredicted RBP16.37■□□□□ 0.21
SMAD9-204ENST00000483941 PPP2R5BQ15173 497 aa16.37■□□□□ 0.21
SMAD9-204ENST00000483941 NBPF9Q3BBW0 867 aa16.37■□□□□ 0.21
SMAD9-204ENST00000483941 SGMS1Q86VZ5 419 aa16.37■□□□□ 0.21
SMAD9-204ENST00000483941 METTL16Q86W50 562 aaKnown RBP16.37■□□□□ 0.21
SMAD9-204ENST00000483941 DGKHQ86XP1 1220 aa16.37■□□□□ 0.21
SMAD9-204ENST00000483941 STK11IPQ8N1F8 1099 aa16.37■□□□□ 0.21
SMAD9-204ENST00000483941 SLKQ9H2G2 1235 aaPredicted RBP16.37■□□□□ 0.21
SMAD9-204ENST00000483941 SCAF8Q9UPN6 1271 aaKnown RBP16.37■□□□□ 0.21
SMAD9-204ENST00000483941 PCDHAC2Q9Y5I4 1007 aa16.37■□□□□ 0.21
SMAD9-204ENST00000483941 PPP2R3BQ9Y5P8 575 aa16.37■□□□□ 0.21
SMAD9-204ENST00000483941 NAV1Q8NEY1 1877 aa16.37■□□□□ 0.21
SMAD9-204ENST00000483941 TBC1D12O60347 775 aa16.36■□□□□ 0.21
SMAD9-204ENST00000483941 FKTNO75072 461 aa16.36■□□□□ 0.21
SMAD9-204ENST00000483941 PRDM1O75626 825 aa16.36■□□□□ 0.21
SMAD9-204ENST00000483941 CALM1P0DP23 149 aa16.36■□□□□ 0.21
SMAD9-204ENST00000483941 CALM2P0DP24 149 aa16.36■□□□□ 0.21
SMAD9-204ENST00000483941 CALM3P0DP25 149 aa16.36■□□□□ 0.21
SMAD9-204ENST00000483941 CACNB3P54284 484 aa16.36■□□□□ 0.21
SMAD9-204ENST00000483941 ANTXR2P58335 489 aa16.36■□□□□ 0.21
SMAD9-204ENST00000483941 TFAP4Q01664 338 aa16.36■□□□□ 0.21
SMAD9-204ENST00000483941 MKRN3Q13064 507 aaKnown RBP16.36■□□□□ 0.21
SMAD9-204ENST00000483941 CUL4AQ13619 759 aa16.36■□□□□ 0.21
SMAD9-204ENST00000483941 HABP4Q5JVS0 413 aaKnown RBP16.36■□□□□ 0.21
SMAD9-204ENST00000483941 CPLX2Q6PUV4 134 aaKnown RBP16.36■□□□□ 0.21
SMAD9-204ENST00000483941 CYB5R4Q7L1T6 521 aa16.36■□□□□ 0.21
SMAD9-204ENST00000483941 CHST3Q7LGC8 479 aa16.36■□□□□ 0.21
SMAD9-204ENST00000483941 IGDCC4Q8TDY8 1250 aa16.36■□□□□ 0.21
SMAD9-204ENST00000483941 TCEANC2Q96MN5 208 aa16.36■□□□□ 0.21
SMAD9-204ENST00000483941 SLC12A7Q9Y666 1083 aa16.36■□□□□ 0.21
SMAD9-204ENST00000483941 CCDC196A0A1B0GTZ2 297 aa16.35■□□□□ 0.21
SMAD9-204ENST00000483941 IFIT1BQ5T764 474 aaKnown RBP16.35■□□□□ 0.21
SMAD9-204ENST00000483941 NOL8Q76FK4 1167 aaKnown RBP16.35■□□□□ 0.21
SMAD9-204ENST00000483941 CATIPQ7Z7H3 387 aa16.35■□□□□ 0.21
SMAD9-204ENST00000483941 NEDD1Q8NHV4 660 aa16.35■□□□□ 0.21
SMAD9-204ENST00000483941 DYNLL2Q96FJ2 89 aa16.35■□□□□ 0.21
SMAD9-204ENST00000483941 LLPHQ9BRT6 129 aaKnown RBP16.35■□□□□ 0.21
SMAD9-204ENST00000483941 CFHR5Q9BXR6 569 aa16.35■□□□□ 0.21
SMAD9-204ENST00000483941 LRRC2Q9BYS8 371 aa16.35■□□□□ 0.21
SMAD9-204ENST00000483941 INCENPQ9NQS7 918 aa16.35■□□□□ 0.21
SMAD9-204ENST00000483941 TPCN1Q9ULQ1 816 aa16.35■□□□□ 0.21
SMAD9-204ENST00000483941 KIF3AQ9Y496 699 aa16.35■□□□□ 0.21
SMAD9-204ENST00000483941 FOCADQ5VW36 1801 aa16.35■□□□□ 0.21
SMAD9-204ENST00000483941 BAZ2AQ9UIF9 1905 aaKnown RBP16.35■□□□□ 0.21
SMAD9-204ENST00000483941 DDTLA6NHG4 134 aaPredicted RBP16.34■□□□□ 0.21
SMAD9-204ENST00000483941 PFKFB2O60825 505 aa16.34■□□□□ 0.21
SMAD9-204ENST00000483941 RASA1P20936 1047 aa16.34■□□□□ 0.21
SMAD9-204ENST00000483941 NF2P35240 595 aa16.34■□□□□ 0.21
SMAD9-204ENST00000483941 SLC4A8Q2Y0W8 1093 aa16.34■□□□□ 0.21
SMAD9-204ENST00000483941 PRAMEF18Q5VWM3 479 aa16.34■□□□□ 0.21
SMAD9-204ENST00000483941 ANKS1AQ92625 1134 aa16.34■□□□□ 0.21
SMAD9-204ENST00000483941 LY9Q9HBG7 655 aa16.34■□□□□ 0.21
SMAD9-204ENST00000483941 NAP1L2Q9ULW6 460 aaPredicted RBP16.34■□□□□ 0.21
SMAD9-204ENST00000483941 TNKSO95271 1327 aa16.34■□□□□ 0.21
SMAD9-204ENST00000483941 MYH1P12882 1939 aa16.33■□□□□ 0.21
SMAD9-204ENST00000483941 KLF18A0A0U1RQI7 1052 aa16.33■□□□□ 0.2
SMAD9-204ENST00000483941 ZBTB43O43298 467 aa16.33■□□□□ 0.2
SMAD9-204ENST00000483941 CDKL5O76039 1030 aa16.33■□□□□ 0.2
SMAD9-204ENST00000483941 APOBRQ0VD83 1088 aa16.33■□□□□ 0.2
SMAD9-204ENST00000483941 RASA3Q14644 834 aa16.33■□□□□ 0.2
SMAD9-204ENST00000483941 ME3Q16798 604 aa16.33■□□□□ 0.2
SMAD9-204ENST00000483941 CERKLQ49MI3 558 aaPredicted RBP16.33■□□□□ 0.2
SMAD9-204ENST00000483941 DCAF15Q66K64 600 aa16.33■□□□□ 0.2
SMAD9-204ENST00000483941 TATDN1Q6P1N9 297 aa16.33■□□□□ 0.2
SMAD9-204ENST00000483941 ZFPM1Q8IX07 1006 aa16.33■□□□□ 0.2
SMAD9-204ENST00000483941 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.33■□□□□ 0.2
SMAD9-204ENST00000483941 CABP5Q9NP86 173 aa16.33■□□□□ 0.2
SMAD9-204ENST00000483941 GINM1Q9NU53 330 aa16.33■□□□□ 0.2
SMAD9-204ENST00000483941 CIZ1Q9ULV3 898 aaPredicted RBP16.33■□□□□ 0.2
SMAD9-204ENST00000483941 ECM29Q5VYK3 1845 aa16.33■□□□□ 0.2
SMAD9-204ENST00000483941 PDIA3P30101 505 aaKnown RBP16.32■□□□□ 0.2
SMAD9-204ENST00000483941 SLC4A3P48751 1232 aa16.32■□□□□ 0.2
SMAD9-204ENST00000483941 SUPT20HL1Q3ZLR7 823 aa16.32■□□□□ 0.2
SMAD9-204ENST00000483941 FAM47AQ5JRC9 791 aa16.32■□□□□ 0.2
SMAD9-204ENST00000483941 SH3BP5LQ7L8J4 393 aa16.32■□□□□ 0.2
SMAD9-204ENST00000483941 GTF3C6Q969F1 213 aa16.32■□□□□ 0.2
SMAD9-204ENST00000483941 PLIN4Q96Q06 1357 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms