RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 CTNNA3Q9UI47 895 aa18.56■□□□□ 0.56
RPP40-206ENST00000483546 AGTPBP1Q9UPW5 1226 aa18.56■□□□□ 0.56
RPP40-206ENST00000483546 SMIM22K7EJ46 135 aa18.55■□□□□ 0.56
RPP40-206ENST00000483546 PDHXO00330 501 aa18.55■□□□□ 0.56
RPP40-206ENST00000483546 AKR1B1P15121 316 aa18.55■□□□□ 0.56
RPP40-206ENST00000483546 RASA1P20936 1047 aa18.55■□□□□ 0.56
RPP40-206ENST00000483546 GUCY1A2P33402 732 aa18.55■□□□□ 0.56
RPP40-206ENST00000483546 CRHR2Q13324 411 aa18.55■□□□□ 0.56
RPP40-206ENST00000483546 MTMR2Q13614 643 aa18.55■□□□□ 0.56
RPP40-206ENST00000483546 SEPT2Q15019 361 aa18.55■□□□□ 0.56
RPP40-206ENST00000483546 SHROOM1Q2M3G4 852 aaPredicted RBP18.55■□□□□ 0.56
RPP40-206ENST00000483546 GPAT2Q6NUI2 795 aa18.55■□□□□ 0.56
RPP40-206ENST00000483546 USP17L2Q6R6M4 530 aa18.55■□□□□ 0.56
RPP40-206ENST00000483546 C12orf42Q96LP6 360 aa18.55■□□□□ 0.56
RPP40-206ENST00000483546 FEZ1Q99689 392 aa18.55■□□□□ 0.56
RPP40-206ENST00000483546 KIAA1683Q9H0B3 1180 aa18.55■□□□□ 0.56
RPP40-206ENST00000483546 KANSL2Q9H9L4 492 aa18.55■□□□□ 0.56
RPP40-206ENST00000483546 ARHGEF10LQ9HCE6 1279 aa18.55■□□□□ 0.56
RPP40-206ENST00000483546 PNMA3Q9UL41 463 aa18.55■□□□□ 0.56
RPP40-206ENST00000483546 CASP8AP2Q9UKL3 1982 aa18.55■□□□□ 0.56
RPP40-206ENST00000483546 TBC1D8O95759 1140 aa18.54■□□□□ 0.56
RPP40-206ENST00000483546 FGRP09769 529 aa18.54■□□□□ 0.56
RPP40-206ENST00000483546 HMGCS2P54868 508 aa18.54■□□□□ 0.56
RPP40-206ENST00000483546 TSKSQ9UJT2 592 aa18.54■□□□□ 0.56
RPP40-206ENST00000483546 PLIN4Q96Q06 1357 aa18.54■□□□□ 0.56
RPP40-206ENST00000483546 GPR25O00155 361 aa18.53■□□□□ 0.56
RPP40-206ENST00000483546 SGSM2O43147 1006 aa18.53■□□□□ 0.56
RPP40-206ENST00000483546 ORC4O43929 436 aa18.53■□□□□ 0.56
RPP40-206ENST00000483546 TLR2O60603 784 aa18.53■□□□□ 0.56
RPP40-206ENST00000483546 ICA1Q05084 483 aa18.53■□□□□ 0.56
RPP40-206ENST00000483546 PPP4R3BQ5MIZ7 849 aa18.53■□□□□ 0.56
RPP40-206ENST00000483546 CASC1Q6TDU7 716 aa18.53■□□□□ 0.56
RPP40-206ENST00000483546 RNF41Q9H4P4 317 aaPredicted RBP18.53■□□□□ 0.56
RPP40-206ENST00000483546 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.53■□□□□ 0.56
RPP40-206ENST00000483546 HOXA7P31268 230 aaPredicted RBP18.52■□□□□ 0.56
RPP40-206ENST00000483546 SYNPO2Q9UMS6 1093 aa18.52■□□□□ 0.56
RPP40-206ENST00000483546 MYH4Q9Y623 1939 aa18.51■□□□□ 0.55
RPP40-206ENST00000483546 ZNF213O14771 459 aa18.51■□□□□ 0.55
RPP40-206ENST00000483546 FKTNO75072 461 aa18.51■□□□□ 0.55
RPP40-206ENST00000483546 TSPY3P0CV98 308 aa18.51■□□□□ 0.55
RPP40-206ENST00000483546 TSPY8P0CW00 308 aa18.51■□□□□ 0.55
RPP40-206ENST00000483546 OSBPP22059 807 aa18.51■□□□□ 0.55
RPP40-206ENST00000483546 IMMTQ16891 758 aaKnown RBP18.51■□□□□ 0.55
RPP40-206ENST00000483546 SKAP1Q86WV1 359 aa18.51■□□□□ 0.55
RPP40-206ENST00000483546 NEDD1Q8NHV4 660 aa18.51■□□□□ 0.55
RPP40-206ENST00000483546 LPAR1Q92633 364 aa18.51■□□□□ 0.55
RPP40-206ENST00000483546 TMX2Q9Y320 296 aa18.51■□□□□ 0.55
RPP40-206ENST00000483546 CDC45O75419 566 aa18.5■□□□□ 0.55
RPP40-206ENST00000483546 PRDM1O75626 825 aa18.5■□□□□ 0.55
RPP40-206ENST00000483546 CTDSPL2Q05D32 466 aa18.5■□□□□ 0.55
RPP40-206ENST00000483546 AKNAD1Q5T1N1 836 aa18.5■□□□□ 0.55
RPP40-206ENST00000483546 TREML2Q5T2D2 321 aa18.5■□□□□ 0.55
RPP40-206ENST00000483546 STK11IPQ8N1F8 1099 aa18.5■□□□□ 0.55
RPP40-206ENST00000483546 ACER1Q8TDN7 264 aa18.5■□□□□ 0.55
RPP40-206ENST00000483546 ZNF296Q8WUU4 475 aaPredicted RBP18.5■□□□□ 0.55
RPP40-206ENST00000483546 STAG1Q8WVM7 1258 aa18.5■□□□□ 0.55
RPP40-206ENST00000483546 IL25Q9H293 177 aa18.5■□□□□ 0.55
RPP40-206ENST00000483546 EMILIN3Q9NT22 766 aa18.5■□□□□ 0.55
RPP40-206ENST00000483546 NYAP2Q9P242 653 aa18.5■□□□□ 0.55
RPP40-206ENST00000483546 ADGRA2Q96PE1 1338 aa18.49■□□□□ 0.55
RPP40-206ENST00000483546 IGKV6D-41A0A0C4DH26 115 aa18.49■□□□□ 0.55
RPP40-206ENST00000483546 MFSD6Q6ZSS7 791 aa18.49■□□□□ 0.55
RPP40-206ENST00000483546 KIAA1211Q6ZU35 1233 aa18.49■□□□□ 0.55
RPP40-206ENST00000483546 GTF3C2Q8WUA4 911 aaPredicted RBP18.49■□□□□ 0.55
RPP40-206ENST00000483546 ERO1AQ96HE7 468 aa18.49■□□□□ 0.55
RPP40-206ENST00000483546 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.49■□□□□ 0.55
RPP40-206ENST00000483546 R3HDMLQ9H3Y0 253 aa18.49■□□□□ 0.55
RPP40-206ENST00000483546 U3KPZ7 1027 aaPredicted RBP18.49■□□□□ 0.55
RPP40-206ENST00000483546 A0A1W2PRG0 241 aa18.48■□□□□ 0.55
RPP40-206ENST00000483546 TSPY2A6NKD2 308 aa18.48■□□□□ 0.55
RPP40-206ENST00000483546 EEF2P13639 858 aaKnown RBP18.48■□□□□ 0.55
RPP40-206ENST00000483546 GCLCP48506 637 aaPredicted RBP18.48■□□□□ 0.55
RPP40-206ENST00000483546 IRX3P78415 501 aaPredicted RBP18.48■□□□□ 0.55
RPP40-206ENST00000483546 TFAP4Q01664 338 aa18.48■□□□□ 0.55
RPP40-206ENST00000483546 SP3Q02447 781 aa18.48■□□□□ 0.55
RPP40-206ENST00000483546 ARHGEF6Q15052 776 aa18.48■□□□□ 0.55
RPP40-206ENST00000483546 C17orf99Q6UX52 265 aa18.48■□□□□ 0.55
RPP40-206ENST00000483546 SIAH1Q8IUQ4 282 aa18.48■□□□□ 0.55
RPP40-206ENST00000483546 SMCR8Q8TEV9 937 aaPredicted RBP18.48■□□□□ 0.55
RPP40-206ENST00000483546 ESYT1Q9BSJ8 1104 aa18.48■□□□□ 0.55
RPP40-206ENST00000483546 VCPKMTQ9H867 229 aa18.48■□□□□ 0.55
RPP40-206ENST00000483546 GOPCQ9HD26 462 aa18.48■□□□□ 0.55
RPP40-206ENST00000483546 USP17L15C9J2P7 530 aa18.47■□□□□ 0.55
RPP40-206ENST00000483546 USP17L13C9JLJ4 530 aa18.47■□□□□ 0.55
RPP40-206ENST00000483546 USP17L11C9JVI0 530 aa18.47■□□□□ 0.55
RPP40-206ENST00000483546 USP17L18D6R9N7 530 aa18.47■□□□□ 0.55
RPP40-206ENST00000483546 USP17L22D6RA61 530 aa18.47■□□□□ 0.55
RPP40-206ENST00000483546 USP17L17D6RBQ6 530 aa18.47■□□□□ 0.55
RPP40-206ENST00000483546 USP17L19D6RCP7 530 aa18.47■□□□□ 0.55
RPP40-206ENST00000483546 USP17L20D6RJB6 530 aa18.47■□□□□ 0.55
RPP40-206ENST00000483546 TTLL1O95922 423 aa18.47■□□□□ 0.55
RPP40-206ENST00000483546 VCAM1P19320 739 aa18.47■□□□□ 0.55
RPP40-206ENST00000483546 HAND2P61296 217 aa18.47■□□□□ 0.55
RPP40-206ENST00000483546 USP17L24Q0WX57 530 aa18.47■□□□□ 0.55
RPP40-206ENST00000483546 MKL1Q969V6 931 aa18.47■□□□□ 0.55
RPP40-206ENST00000483546 ASCC2Q9H1I8 757 aaPredicted RBP18.47■□□□□ 0.55
RPP40-206ENST00000483546 MTMR4Q9NYA4 1195 aa18.47■□□□□ 0.55
RPP40-206ENST00000483546 RANBP6O60518 1105 aaKnown RBP18.46■□□□□ 0.55
RPP40-206ENST00000483546 CYP2C8P10632 490 aa18.46■□□□□ 0.55
RPP40-206ENST00000483546 ZYXQ15942 572 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms