RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 TMOD4Q9NZQ9 345 aa15.98■□□□□ 0.15
SSR1-208ENST00000483409 AGTPBP1Q9UPW5 1226 aa15.98■□□□□ 0.15
SSR1-208ENST00000483409 MGAMO43451 1857 aa15.97■□□□□ 0.15
SSR1-208ENST00000483409 TLR2O60603 784 aa15.97■□□□□ 0.15
SSR1-208ENST00000483409 HSPD1P10809 573 aaKnown RBP15.97■□□□□ 0.15
SSR1-208ENST00000483409 PPARAQ07869 468 aa15.97■□□□□ 0.15
SSR1-208ENST00000483409 CCDC17Q96LX7 622 aa15.97■□□□□ 0.15
SSR1-208ENST00000483409 MKNK2Q9HBH9 465 aa15.97■□□□□ 0.15
SSR1-208ENST00000483409 C19orf81C9J6K1 198 aa15.96■□□□□ 0.15
SSR1-208ENST00000483409 PRDM1O75626 825 aa15.96■□□□□ 0.15
SSR1-208ENST00000483409 RASA1P20936 1047 aa15.96■□□□□ 0.15
SSR1-208ENST00000483409 MFAP1P55081 439 aaKnown RBP15.96■□□□□ 0.15
SSR1-208ENST00000483409 SP3Q02447 781 aa15.96■□□□□ 0.15
SSR1-208ENST00000483409 USP17L2Q6R6M4 530 aa15.96■□□□□ 0.15
SSR1-208ENST00000483409 CD99L2Q8TCZ2 262 aa15.96■□□□□ 0.15
SSR1-208ENST00000483409 EMILIN3Q9NT22 766 aa15.96■□□□□ 0.15
SSR1-208ENST00000483409 CPA4Q9UI42 421 aa15.96■□□□□ 0.15
SSR1-208ENST00000483409 SLC45A1Q9Y2W3 748 aa15.96■□□□□ 0.15
SSR1-208ENST00000483409 ADGRA2Q96PE1 1338 aa15.95■□□□□ 0.14
SSR1-208ENST00000483409 SLC3A2P08195 630 aaKnown RBP15.95■□□□□ 0.14
SSR1-208ENST00000483409 ICA1Q05084 483 aa15.95■□□□□ 0.14
SSR1-208ENST00000483409 CTDSPL2Q05D32 466 aa15.95■□□□□ 0.14
SSR1-208ENST00000483409 ALX1Q15699 326 aa15.95■□□□□ 0.14
SSR1-208ENST00000483409 A0A1W2PRG0 241 aa15.94■□□□□ 0.14
SSR1-208ENST00000483409 ECM2O94769 699 aaPredicted RBP15.94■□□□□ 0.14
SSR1-208ENST00000483409 FGAP02671 866 aa15.94■□□□□ 0.14
SSR1-208ENST00000483409 USP14P54578 494 aa15.94■□□□□ 0.14
SSR1-208ENST00000483409 ATP2B2Q01814 1243 aa15.94■□□□□ 0.14
SSR1-208ENST00000483409 PDE4BQ07343 736 aa15.94■□□□□ 0.14
SSR1-208ENST00000483409 PABPC4Q13310 644 aaKnown RBP eCLIP15.94■□□□□ 0.14
SSR1-208ENST00000483409 C17orf99Q6UX52 265 aa15.94■□□□□ 0.14
SSR1-208ENST00000483409 CTU1Q7Z7A3 348 aaKnown RBP15.94■□□□□ 0.14
SSR1-208ENST00000483409 SMCR8Q8TEV9 937 aaPredicted RBP15.94■□□□□ 0.14
SSR1-208ENST00000483409 ERO1AQ96HE7 468 aa15.94■□□□□ 0.14
SSR1-208ENST00000483409 MCOLN1Q9GZU1 580 aa15.94■□□□□ 0.14
SSR1-208ENST00000483409 KIAA1683Q9H0B3 1180 aa15.94■□□□□ 0.14
SSR1-208ENST00000483409 IL25Q9H293 177 aa15.94■□□□□ 0.14
SSR1-208ENST00000483409 ZNF287Q9HBT7 754 aa15.94■□□□□ 0.14
SSR1-208ENST00000483409 PNMA3Q9UL41 463 aa15.94■□□□□ 0.14
SSR1-208ENST00000483409 OSBPP22059 807 aa15.93■□□□□ 0.14
SSR1-208ENST00000483409 CHMLP26374 656 aa15.93■□□□□ 0.14
SSR1-208ENST00000483409 HAND2P61296 217 aa15.93■□□□□ 0.14
SSR1-208ENST00000483409 CAP1Q01518 475 aa15.93■□□□□ 0.14
SSR1-208ENST00000483409 ZNF444Q8N0Y2 327 aaPredicted RBP15.93■□□□□ 0.14
SSR1-208ENST00000483409 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.93■□□□□ 0.14
SSR1-208ENST00000483409 ASCC2Q9H1I8 757 aaPredicted RBP15.93■□□□□ 0.14
SSR1-208ENST00000483409 ARHGEF10LQ9HCE6 1279 aa15.93■□□□□ 0.14
SSR1-208ENST00000483409 INCENPQ9NQS7 918 aa15.93■□□□□ 0.14
SSR1-208ENST00000483409 ZMYM6O95789 1325 aa15.93■□□□□ 0.14
SSR1-208ENST00000483409 PARP14Q460N5 1801 aa15.92■□□□□ 0.14
SSR1-208ENST00000483409 VCAM1P19320 739 aa15.92■□□□□ 0.14
SSR1-208ENST00000483409 IRX3P78415 501 aaPredicted RBP15.92■□□□□ 0.14
SSR1-208ENST00000483409 SIAH1Q8IUQ4 282 aa15.92■□□□□ 0.14
SSR1-208ENST00000483409 C12orf42Q96LP6 360 aa15.92■□□□□ 0.14
SSR1-208ENST00000483409 KANSL2Q9H9L4 492 aa15.92■□□□□ 0.14
SSR1-208ENST00000483409 ANAPC4Q9UJX5 808 aa15.92■□□□□ 0.14
SSR1-208ENST00000483409 TRIM17Q9Y577 477 aa15.92■□□□□ 0.14
SSR1-208ENST00000483409 TACC3Q9Y6A5 838 aa15.92■□□□□ 0.14
SSR1-208ENST00000483409 DOCK3Q8IZD9 2030 aa15.92■□□□□ 0.14
SSR1-208ENST00000483409 TSPY3P0CV98 308 aa15.91■□□□□ 0.14
SSR1-208ENST00000483409 TSPY8P0CW00 308 aa15.91■□□□□ 0.14
SSR1-208ENST00000483409 BCRP11274 1271 aa15.91■□□□□ 0.14
SSR1-208ENST00000483409 EEF2P13639 858 aaKnown RBP15.91■□□□□ 0.14
SSR1-208ENST00000483409 HOXA7P31268 230 aaPredicted RBP15.91■□□□□ 0.14
SSR1-208ENST00000483409 FAM47AQ5JRC9 791 aa15.91■□□□□ 0.14
SSR1-208ENST00000483409 OTOP1Q7RTM1 612 aa15.91■□□□□ 0.14
SSR1-208ENST00000483409 ARHGAP39Q9C0H5 1083 aa15.91■□□□□ 0.14
SSR1-208ENST00000483409 PPP4R2Q9NY27 417 aa15.91■□□□□ 0.14
SSR1-208ENST00000483409 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.91■□□□□ 0.14
SSR1-208ENST00000483409 RAD50Q92878 1312 aa15.91■□□□□ 0.14
SSR1-208ENST00000483409 LACTBP83111 547 aaPredicted RBP15.9■□□□□ 0.14
SSR1-208ENST00000483409 KIAA1755Q5JYT7 1200 aa15.9■□□□□ 0.14
SSR1-208ENST00000483409 ANKRD13CQ8N6S4 541 aa15.9■□□□□ 0.14
SSR1-208ENST00000483409 RUFY2Q8WXA3 655 aa15.9■□□□□ 0.14
SSR1-208ENST00000483409 P2RX7Q99572 595 aaKnown RBP15.9■□□□□ 0.14
SSR1-208ENST00000483409 DSCC1Q9BVC3 393 aa15.9■□□□□ 0.14
SSR1-208ENST00000483409 RPAP3Q9H6T3 665 aaPredicted RBP15.9■□□□□ 0.14
SSR1-208ENST00000483409 SH2D4AQ9H788 454 aa15.9■□□□□ 0.14
SSR1-208ENST00000483409 EFCC1Q9HA90 598 aa15.9■□□□□ 0.14
SSR1-208ENST00000483409 TMX2Q9Y320 296 aa15.9■□□□□ 0.14
SSR1-208ENST00000483409 RLFQ13129 1914 aa15.9■□□□□ 0.14
SSR1-208ENST00000483409 PLIN4Q96Q06 1357 aa15.89■□□□□ 0.13
SSR1-208ENST00000483409 IGKV6D-41A0A0C4DH26 115 aa15.89■□□□□ 0.13
SSR1-208ENST00000483409 USP17L15C9J2P7 530 aa15.89■□□□□ 0.13
SSR1-208ENST00000483409 USP17L13C9JLJ4 530 aa15.89■□□□□ 0.13
SSR1-208ENST00000483409 USP17L11C9JVI0 530 aa15.89■□□□□ 0.13
SSR1-208ENST00000483409 USP17L18D6R9N7 530 aa15.89■□□□□ 0.13
SSR1-208ENST00000483409 USP17L22D6RA61 530 aa15.89■□□□□ 0.13
SSR1-208ENST00000483409 USP17L17D6RBQ6 530 aa15.89■□□□□ 0.13
SSR1-208ENST00000483409 USP17L19D6RCP7 530 aa15.89■□□□□ 0.13
SSR1-208ENST00000483409 USP17L20D6RJB6 530 aa15.89■□□□□ 0.13
SSR1-208ENST00000483409 RAD21O60216 631 aa15.89■□□□□ 0.13
SSR1-208ENST00000483409 GCLCP48506 637 aaPredicted RBP15.89■□□□□ 0.13
SSR1-208ENST00000483409 HERVK_113P62684 666 aa15.89■□□□□ 0.13
SSR1-208ENST00000483409 TFAP4Q01664 338 aa15.89■□□□□ 0.13
SSR1-208ENST00000483409 USP17L24Q0WX57 530 aa15.89■□□□□ 0.13
SSR1-208ENST00000483409 KIF22Q14807 665 aa15.89■□□□□ 0.13
SSR1-208ENST00000483409 BMP2KLQ5H9B9 411 aa15.89■□□□□ 0.13
SSR1-208ENST00000483409 RRP12Q5JTH9 1297 aaKnown RBP15.89■□□□□ 0.13
SSR1-208ENST00000483409 ERICH6BQ5W0A0 696 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms