RNA–Protein interactions for RNA: ENST00000482987.1

EPHB3-203, Transcript of EPH receptor B3, humanhuman

TSL 3

Gene EPHB3, Length 482 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-203ENST00000482987 SOCS4Q8WXH5 440 aa13.96□□□□□ -0.17
EPHB3-203ENST00000482987 DNAJC2Q99543 621 aaKnown RBP13.96□□□□□ -0.17
EPHB3-203ENST00000482987 FEZ1Q99689 392 aa13.96□□□□□ -0.17
EPHB3-203ENST00000482987 NUDT12Q9BQG2 462 aa13.96□□□□□ -0.17
EPHB3-203ENST00000482987 KIAA1683Q9H0B3 1180 aa13.96□□□□□ -0.17
EPHB3-203ENST00000482987 DDX60LQ5H9U9 1706 aaKnown RBP13.95□□□□□ -0.18
EPHB3-203ENST00000482987 DOCK3Q8IZD9 2030 aa13.95□□□□□ -0.18
EPHB3-203ENST00000482987 PLXNB2O15031 1838 aa13.95□□□□□ -0.18
EPHB3-203ENST00000482987 CHGBP05060 677 aa13.95□□□□□ -0.18
EPHB3-203ENST00000482987 MS4A1P11836 297 aa13.95□□□□□ -0.18
EPHB3-203ENST00000482987 XRCC5P13010 732 aaKnown RBP13.95□□□□□ -0.18
EPHB3-203ENST00000482987 PRKAR2AP13861 404 aaKnown RBP13.95□□□□□ -0.18
EPHB3-203ENST00000482987 CAPN2P17655 700 aa13.95□□□□□ -0.18
EPHB3-203ENST00000482987 VCAM1P19320 739 aa13.95□□□□□ -0.18
EPHB3-203ENST00000482987 MAPK4P31152 587 aa13.95□□□□□ -0.18
EPHB3-203ENST00000482987 CCL14Q16627 93 aa13.95□□□□□ -0.18
EPHB3-203ENST00000482987 MORN1Q5T089 497 aa13.95□□□□□ -0.18
EPHB3-203ENST00000482987 GPR142Q7Z601 462 aa13.95□□□□□ -0.18
EPHB3-203ENST00000482987 LCORLQ8N3X6 602 aa13.95□□□□□ -0.18
EPHB3-203ENST00000482987 GTF3C2Q8WUA4 911 aaPredicted RBP13.95□□□□□ -0.18
EPHB3-203ENST00000482987 SDR42E1Q8WUS8 393 aa13.95□□□□□ -0.18
EPHB3-203ENST00000482987 BCL11AQ9H165 835 aa13.95□□□□□ -0.18
EPHB3-203ENST00000482987 HMX1Q9NP08 348 aaPredicted RBP13.95□□□□□ -0.18
EPHB3-203ENST00000482987 DDX19BQ9UMR2 479 aa13.95□□□□□ -0.18
EPHB3-203ENST00000482987 USP17L15C9J2P7 530 aa13.94□□□□□ -0.18
EPHB3-203ENST00000482987 USP17L13C9JLJ4 530 aa13.94□□□□□ -0.18
EPHB3-203ENST00000482987 USP17L11C9JVI0 530 aa13.94□□□□□ -0.18
EPHB3-203ENST00000482987 USP17L18D6R9N7 530 aa13.94□□□□□ -0.18
EPHB3-203ENST00000482987 USP17L22D6RA61 530 aa13.94□□□□□ -0.18
EPHB3-203ENST00000482987 USP17L17D6RBQ6 530 aa13.94□□□□□ -0.18
EPHB3-203ENST00000482987 USP17L19D6RCP7 530 aa13.94□□□□□ -0.18
EPHB3-203ENST00000482987 USP17L20D6RJB6 530 aa13.94□□□□□ -0.18
EPHB3-203ENST00000482987 EVI5O60447 810 aa13.94□□□□□ -0.18
EPHB3-203ENST00000482987 POLR3DP05423 398 aaPredicted RBP13.94□□□□□ -0.18
EPHB3-203ENST00000482987 IFIT2P09913 472 aaKnown RBP13.94□□□□□ -0.18
EPHB3-203ENST00000482987 CYP2D6P10635 497 aa13.94□□□□□ -0.18
EPHB3-203ENST00000482987 USP17L24Q0WX57 530 aa13.94□□□□□ -0.18
EPHB3-203ENST00000482987 SEPT2Q15019 361 aa13.94□□□□□ -0.18
EPHB3-203ENST00000482987 CATSPERGQ6ZRH7 1159 aa13.94□□□□□ -0.18
EPHB3-203ENST00000482987 NECAB2Q7Z6G3 386 aa13.94□□□□□ -0.18
EPHB3-203ENST00000482987 CRNKL1Q9BZJ0 848 aaKnown RBP13.94□□□□□ -0.18
EPHB3-203ENST00000482987 DCP1AQ9NPI6 582 aaPredicted RBP13.94□□□□□ -0.18
EPHB3-203ENST00000482987 MCM9Q9NXL9 1143 aa13.94□□□□□ -0.18
EPHB3-203ENST00000482987 OGDHLQ9ULD0 1010 aa13.94□□□□□ -0.18
EPHB3-203ENST00000482987 NR2E3Q9Y5X4 410 aa13.94□□□□□ -0.18
EPHB3-203ENST00000482987 A0A1W2PRG0 241 aa13.93□□□□□ -0.18
EPHB3-203ENST00000482987 SMIM22K7EJ46 135 aa13.93□□□□□ -0.18
EPHB3-203ENST00000482987 RAB11FIP3O75154 756 aa13.93□□□□□ -0.18
EPHB3-203ENST00000482987 HMMRO75330 724 aa13.93□□□□□ -0.18
EPHB3-203ENST00000482987 USP14P54578 494 aa13.93□□□□□ -0.18
EPHB3-203ENST00000482987 CACNB2Q08289 660 aaPredicted RBP13.93□□□□□ -0.18
EPHB3-203ENST00000482987 PDE3AQ14432 1141 aa13.93□□□□□ -0.18
EPHB3-203ENST00000482987 C20orf194Q5TEA3 1177 aa13.93□□□□□ -0.18
EPHB3-203ENST00000482987 PLEKHH3Q7Z736 793 aa13.93□□□□□ -0.18
EPHB3-203ENST00000482987 ANKLE1Q8NAG6 615 aa13.93□□□□□ -0.18
EPHB3-203ENST00000482987 SLC44A5Q8NCS7 719 aa13.93□□□□□ -0.18
EPHB3-203ENST00000482987 BOLA2Q9H3K6 86 aa13.93□□□□□ -0.18
EPHB3-203ENST00000482987 BTBD7Q9P203 1132 aa13.93□□□□□ -0.18
EPHB3-203ENST00000482987 RABGAP1Q9Y3P9 1069 aa13.93□□□□□ -0.18
EPHB3-203ENST00000482987 COL6A3P12111 3177 aa13.92□□□□□ -0.18
EPHB3-203ENST00000482987 SPDYE16A6NNV3 312 aaPredicted RBP13.92□□□□□ -0.18
EPHB3-203ENST00000482987 PRKAB2O43741 272 aa13.92□□□□□ -0.18
EPHB3-203ENST00000482987 ZKSCAN1P17029 563 aaPredicted RBP13.92□□□□□ -0.18
EPHB3-203ENST00000482987 ATP5JP18859 108 aa13.92□□□□□ -0.18
EPHB3-203ENST00000482987 ADD2P35612 726 aa13.92□□□□□ -0.18
EPHB3-203ENST00000482987 KIAA1755Q5JYT7 1200 aa13.92□□□□□ -0.18
EPHB3-203ENST00000482987 LBX2Q6XYB7 198 aa13.92□□□□□ -0.18
EPHB3-203ENST00000482987 APBA2Q99767 749 aa13.92□□□□□ -0.18
EPHB3-203ENST00000482987 RPAP3Q9H6T3 665 aaPredicted RBP13.92□□□□□ -0.18
EPHB3-203ENST00000482987 ARMT1Q9H993 441 aa13.92□□□□□ -0.18
EPHB3-203ENST00000482987 CABP5Q9NP86 173 aa13.92□□□□□ -0.18
EPHB3-203ENST00000482987 PAG1Q9NWQ8 432 aa13.92□□□□□ -0.18
EPHB3-203ENST00000482987 RCAN3Q9UKA8 241 aa13.92□□□□□ -0.18
EPHB3-203ENST00000482987 PFASO15067 1338 aa13.91□□□□□ -0.18
EPHB3-203ENST00000482987 MBD4O95243 580 aa13.91□□□□□ -0.18
EPHB3-203ENST00000482987 CCND3P30281 292 aaPredicted RBP13.91□□□□□ -0.18
EPHB3-203ENST00000482987 RGS2P41220 211 aa13.91□□□□□ -0.18
EPHB3-203ENST00000482987 MAP2K5Q13163 448 aa13.91□□□□□ -0.18
EPHB3-203ENST00000482987 LHX8Q68G74 356 aa13.91□□□□□ -0.18
EPHB3-203ENST00000482987 CCAR1Q8IX12 1150 aaKnown RBP13.91□□□□□ -0.18
EPHB3-203ENST00000482987 DYNLL2Q96FJ2 89 aa13.91□□□□□ -0.18
EPHB3-203ENST00000482987 HAUS7Q99871 368 aa13.91□□□□□ -0.18
EPHB3-203ENST00000482987 NBPF3Q9H094 633 aa13.91□□□□□ -0.18
EPHB3-203ENST00000482987 FLRT1Q9NZU1 646 aa13.91□□□□□ -0.18
EPHB3-203ENST00000482987 MYH1P12882 1939 aa13.91□□□□□ -0.18
EPHB3-203ENST00000482987 A0A0C4DFX4 3053 aa13.91□□□□□ -0.18
EPHB3-203ENST00000482987 MPHOSPH10O00566 681 aaKnown RBP13.9□□□□□ -0.18
EPHB3-203ENST00000482987 CLEC10AQ8IUN9 316 aa13.9□□□□□ -0.18
EPHB3-203ENST00000482987 SIAH1Q8IUQ4 282 aa13.9□□□□□ -0.18
EPHB3-203ENST00000482987 TRMT44Q8IYL2 757 aaKnown RBP13.9□□□□□ -0.18
EPHB3-203ENST00000482987 C7orf61Q8IZ16 206 aa13.9□□□□□ -0.18
EPHB3-203ENST00000482987 C11orf49Q9H6J7 331 aa13.9□□□□□ -0.18
EPHB3-203ENST00000482987 STAP2Q9UGK3 403 aa13.9□□□□□ -0.18
EPHB3-203ENST00000482987 CYP2D7A0A087X1C5 515 aa13.89□□□□□ -0.19
EPHB3-203ENST00000482987 SMARCA5O60264 1052 aaPredicted RBP13.89□□□□□ -0.19
EPHB3-203ENST00000482987 AKR1B1P15121 316 aa13.89□□□□□ -0.19
EPHB3-203ENST00000482987 PTPREP23469 700 aa13.89□□□□□ -0.19
EPHB3-203ENST00000482987 CCNA1P78396 465 aa13.89□□□□□ -0.19
EPHB3-203ENST00000482987 GRB14Q14449 540 aa13.89□□□□□ -0.19
EPHB3-203ENST00000482987 NPLOC4Q8TAT6 608 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms