RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 SUPT20HL1Q3ZLR7 823 aa17.62■□□□□ 0.41
PHGDH-205ENST00000482968 HOOK2Q96ED9 719 aa17.62■□□□□ 0.41
PHGDH-205ENST00000482968 MYL10Q9BUA6 226 aa17.62■□□□□ 0.41
PHGDH-205ENST00000482968 CABP5Q9NP86 173 aa17.62■□□□□ 0.41
PHGDH-205ENST00000482968 GH2P01242 217 aa17.61■□□□□ 0.41
PHGDH-205ENST00000482968 DCAF15Q66K64 600 aa17.61■□□□□ 0.41
PHGDH-205ENST00000482968 APOA5Q6Q788 366 aa17.61■□□□□ 0.41
PHGDH-205ENST00000482968 SYNE3Q6ZMZ3 975 aa17.61■□□□□ 0.41
PHGDH-205ENST00000482968 CLEC10AQ8IUN9 316 aa17.61■□□□□ 0.41
PHGDH-205ENST00000482968 CCDC83Q8IWF9 413 aa17.61■□□□□ 0.41
PHGDH-205ENST00000482968 GLIS2Q9BZE0 524 aaPredicted RBP17.61■□□□□ 0.41
PHGDH-205ENST00000482968 MTMR4Q9NYA4 1195 aa17.61■□□□□ 0.41
PHGDH-205ENST00000482968 FZD1Q9UP38 647 aa17.61■□□□□ 0.41
PHGDH-205ENST00000482968 IGKV6D-41A0A0C4DH26 115 aa17.61■□□□□ 0.41
PHGDH-205ENST00000482968 GOLGA8BA8MQT2 603 aa17.61■□□□□ 0.41
PHGDH-205ENST00000482968 PHF20L1A8MW92 1017 aa17.61■□□□□ 0.41
PHGDH-205ENST00000482968 RXRAP19793 462 aa17.61■□□□□ 0.41
PHGDH-205ENST00000482968 SEPT2Q15019 361 aa17.61■□□□□ 0.41
PHGDH-205ENST00000482968 RAB3GAP1Q15042 981 aa17.61■□□□□ 0.41
PHGDH-205ENST00000482968 TMEM179Q6ZVK1 233 aa17.61■□□□□ 0.41
PHGDH-205ENST00000482968 CDC37L1Q7L3B6 337 aa17.61■□□□□ 0.41
PHGDH-205ENST00000482968 ANKS1AQ92625 1134 aa17.61■□□□□ 0.41
PHGDH-205ENST00000482968 PLIN4Q96Q06 1357 aa17.6■□□□□ 0.41
PHGDH-205ENST00000482968 ZBTB43O43298 467 aa17.6■□□□□ 0.41
PHGDH-205ENST00000482968 PFKFB2O60825 505 aa17.6■□□□□ 0.41
PHGDH-205ENST00000482968 CAP2P40123 477 aa17.6■□□□□ 0.41
PHGDH-205ENST00000482968 ATP2B2Q01814 1243 aa17.6■□□□□ 0.41
PHGDH-205ENST00000482968 SCRN1Q12765 414 aa17.6■□□□□ 0.41
PHGDH-205ENST00000482968 CUL4AQ13619 759 aa17.6■□□□□ 0.41
PHGDH-205ENST00000482968 PRKG1Q13976 671 aa17.6■□□□□ 0.41
PHGDH-205ENST00000482968 MAP1SQ66K74 1059 aaPredicted RBP17.6■□□□□ 0.41
PHGDH-205ENST00000482968 MICU3Q86XE3 530 aa17.6■□□□□ 0.41
PHGDH-205ENST00000482968 CCDC144CPQ8IYA2 1237 aa17.6■□□□□ 0.41
PHGDH-205ENST00000482968 ZNF654Q8IZM8 581 aa17.6■□□□□ 0.41
PHGDH-205ENST00000482968 NUP133Q8WUM0 1156 aa17.6■□□□□ 0.41
PHGDH-205ENST00000482968 TMEM47Q9BQJ4 181 aa17.6■□□□□ 0.41
PHGDH-205ENST00000482968 KAT14Q9H8E8 782 aa17.6■□□□□ 0.41
PHGDH-205ENST00000482968 CLIP2Q9UDT6 1046 aa17.6■□□□□ 0.41
PHGDH-205ENST00000482968 HPS5Q9UPZ3 1129 aa17.6■□□□□ 0.41
PHGDH-205ENST00000482968 DTNBO60941 627 aa17.59■□□□□ 0.41
PHGDH-205ENST00000482968 GUCY1A2P33402 732 aa17.59■□□□□ 0.41
PHGDH-205ENST00000482968 ST3GAL1Q11201 340 aa17.59■□□□□ 0.41
PHGDH-205ENST00000482968 CATIPQ7Z7H3 387 aa17.59■□□□□ 0.41
PHGDH-205ENST00000482968 ZNF341Q9BYN7 854 aa17.59■□□□□ 0.41
PHGDH-205ENST00000482968 KANSL2Q9H9L4 492 aa17.59■□□□□ 0.41
PHGDH-205ENST00000482968 NCOA5Q9HCD5 579 aaKnown RBP17.59■□□□□ 0.41
PHGDH-205ENST00000482968 TTLL1O95922 423 aa17.58■□□□□ 0.41
PHGDH-205ENST00000482968 PNMA1Q8ND90 353 aa17.58■□□□□ 0.41
PHGDH-205ENST00000482968 GTF3C6Q969F1 213 aa17.58■□□□□ 0.41
PHGDH-205ENST00000482968 MTMR7Q9Y216 660 aa17.58■□□□□ 0.41
PHGDH-205ENST00000482968 NOVP48745 357 aa17.58■□□□□ 0.4
PHGDH-205ENST00000482968 METAP2P50579 478 aaKnown RBP eCLIP17.58■□□□□ 0.4
PHGDH-205ENST00000482968 CHMP4CQ96CF2 233 aa17.58■□□□□ 0.4
PHGDH-205ENST00000482968 CDCA5Q96FF9 252 aa17.58■□□□□ 0.4
PHGDH-205ENST00000482968 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.58■□□□□ 0.4
PHGDH-205ENST00000482968 GREB1LQ9C091 1923 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-205ENST00000482968 CTNND1O60716 968 aaKnown RBP17.57■□□□□ 0.4
PHGDH-205ENST00000482968 TOP1P11387 765 aaKnown RBP17.57■□□□□ 0.4
PHGDH-205ENST00000482968 EEF2P13639 858 aaKnown RBP17.57■□□□□ 0.4
PHGDH-205ENST00000482968 INPP5BP32019 993 aa17.57■□□□□ 0.4
PHGDH-205ENST00000482968 ICA1Q05084 483 aa17.57■□□□□ 0.4
PHGDH-205ENST00000482968 LDHDQ86WU2 507 aa17.57■□□□□ 0.4
PHGDH-205ENST00000482968 WRNIP1Q96S55 665 aa17.57■□□□□ 0.4
PHGDH-205ENST00000482968 ZBTB21Q9ULJ3 1066 aa17.57■□□□□ 0.4
PHGDH-205ENST00000482968 SSC5DA1L4H1 1573 aa17.57■□□□□ 0.4
PHGDH-205ENST00000482968 GOLGA8AA7E2F4 631 aa17.56■□□□□ 0.4
PHGDH-205ENST00000482968 USP2O75604 605 aaPredicted RBP17.56■□□□□ 0.4
PHGDH-205ENST00000482968 NF2P35240 595 aa17.56■□□□□ 0.4
PHGDH-205ENST00000482968 ADD1P35611 737 aaKnown RBP17.56■□□□□ 0.4
PHGDH-205ENST00000482968 TROAPQ12815 778 aa17.56■□□□□ 0.4
PHGDH-205ENST00000482968 SIAH1Q8IUQ4 282 aa17.56■□□□□ 0.4
PHGDH-205ENST00000482968 LRRC47Q8N1G4 583 aaKnown RBP17.56■□□□□ 0.4
PHGDH-205ENST00000482968 FANCBQ8NB91 859 aa17.56■□□□□ 0.4
PHGDH-205ENST00000482968 ZKSCAN4Q969J2 545 aaPredicted RBP17.56■□□□□ 0.4
PHGDH-205ENST00000482968 KLRG1Q96E93 195 aa17.56■□□□□ 0.4
PHGDH-205ENST00000482968 ZNF112Q9UJU3 913 aa17.56■□□□□ 0.4
PHGDH-205ENST00000482968 PPP1R12BO60237 982 aaPredicted RBP17.56■□□□□ 0.4
PHGDH-205ENST00000482968 ASNSP08243 561 aa17.56■□□□□ 0.4
PHGDH-205ENST00000482968 CDC27P30260 824 aa17.56■□□□□ 0.4
PHGDH-205ENST00000482968 PPP4R3BQ5MIZ7 849 aa17.56■□□□□ 0.4
PHGDH-205ENST00000482968 INTS4Q96HW7 963 aaKnown RBP17.56■□□□□ 0.4
PHGDH-205ENST00000482968 NYAP2Q9P242 653 aa17.56■□□□□ 0.4
PHGDH-205ENST00000482968 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.56■□□□□ 0.4
PHGDH-205ENST00000482968 MYH4Q9Y623 1939 aa17.55■□□□□ 0.4
PHGDH-205ENST00000482968 TRAF5O00463 557 aa17.55■□□□□ 0.4
PHGDH-205ENST00000482968 DDAH1O94760 285 aa17.55■□□□□ 0.4
PHGDH-205ENST00000482968 CALM1P0DP23 149 aa17.55■□□□□ 0.4
PHGDH-205ENST00000482968 CALM2P0DP24 149 aa17.55■□□□□ 0.4
PHGDH-205ENST00000482968 CALM3P0DP25 149 aa17.55■□□□□ 0.4
PHGDH-205ENST00000482968 FMR1Q06787 632 aaKnown RBP eCLIP17.55■□□□□ 0.41e-7■■■□□ 15.9
PHGDH-205ENST00000482968 CCDC84Q86UT8 332 aaPredicted RBP17.55■□□□□ 0.4
PHGDH-205ENST00000482968 FAM217BQ9NTX9 383 aaPredicted RBP17.55■□□□□ 0.4
PHGDH-205ENST00000482968 CPLX1O14810 134 aa17.54■□□□□ 0.4
PHGDH-205ENST00000482968 DHX16O60231 1041 aaKnown RBP17.54■□□□□ 0.4
PHGDH-205ENST00000482968 PPFIA3O75145 1194 aa17.54■□□□□ 0.4
PHGDH-205ENST00000482968 NBR1Q14596 966 aa17.54■□□□□ 0.4
PHGDH-205ENST00000482968 RTN1Q16799 776 aa17.54■□□□□ 0.4
PHGDH-205ENST00000482968 MKL1Q969V6 931 aa17.54■□□□□ 0.4
PHGDH-205ENST00000482968 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.54■□□□□ 0.4
PHGDH-205ENST00000482968 ATAD5Q96QE3 1844 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms