RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 BACE1P56817 501 aa10.45□□□□□ -0.74
SNX4-205ENST00000482965 PPARAQ07869 468 aa10.45□□□□□ -0.74
SNX4-205ENST00000482965 MTMR2Q13614 643 aa10.45□□□□□ -0.74
SNX4-205ENST00000482965 MOGSQ13724 837 aa10.45□□□□□ -0.74
SNX4-205ENST00000482965 SEPT2Q15019 361 aa10.45□□□□□ -0.74
SNX4-205ENST00000482965 ALX1Q15699 326 aa10.45□□□□□ -0.74
SNX4-205ENST00000482965 TMEM179Q6ZVK1 233 aa10.45□□□□□ -0.74
SNX4-205ENST00000482965 PROCA1Q8NCQ7 364 aaPredicted RBP10.45□□□□□ -0.74
SNX4-205ENST00000482965 RUFY2Q8WXA3 655 aa10.45□□□□□ -0.74
SNX4-205ENST00000482965 FEZ1Q99689 392 aa10.45□□□□□ -0.74
SNX4-205ENST00000482965 R3HDMLQ9H3Y0 253 aa10.45□□□□□ -0.74
SNX4-205ENST00000482965 ZNF287Q9HBT7 754 aa10.45□□□□□ -0.74
SNX4-205ENST00000482965 TMOD4Q9NZQ9 345 aa10.45□□□□□ -0.74
SNX4-205ENST00000482965 PCNTO95613 3336 aa10.44□□□□□ -0.74
SNX4-205ENST00000482965 C19orf81C9J6K1 198 aa10.44□□□□□ -0.74
SNX4-205ENST00000482965 GUCY1A2P33402 732 aa10.44□□□□□ -0.74
SNX4-205ENST00000482965 PDE4BQ07343 736 aa10.44□□□□□ -0.74
SNX4-205ENST00000482965 SH3D19Q5HYK7 790 aa10.44□□□□□ -0.74
SNX4-205ENST00000482965 GPAT2Q6NUI2 795 aa10.44□□□□□ -0.74
SNX4-205ENST00000482965 ZNF444Q8N0Y2 327 aaPredicted RBP10.44□□□□□ -0.74
SNX4-205ENST00000482965 AGTPBP1Q9UPW5 1226 aa10.44□□□□□ -0.74
SNX4-205ENST00000482965 GREB1LQ9C091 1923 aaPredicted RBP10.43□□□□□ -0.74
SNX4-205ENST00000482965 MYH4Q9Y623 1939 aa10.43□□□□□ -0.74
SNX4-205ENST00000482965 ZMYM6O95789 1325 aa10.43□□□□□ -0.74
SNX4-205ENST00000482965 RAD50Q92878 1312 aa10.43□□□□□ -0.74
SNX4-205ENST00000482965 LAMA4Q16363 1823 aa10.43□□□□□ -0.74
SNX4-205ENST00000482965 FKTNO75072 461 aa10.43□□□□□ -0.74
SNX4-205ENST00000482965 PRDM1O75626 825 aa10.43□□□□□ -0.74
SNX4-205ENST00000482965 FGAP02671 866 aa10.43□□□□□ -0.74
SNX4-205ENST00000482965 RASA1P20936 1047 aa10.43□□□□□ -0.74
SNX4-205ENST00000482965 CHMLP26374 656 aa10.43□□□□□ -0.74
SNX4-205ENST00000482965 USP14P54578 494 aa10.43□□□□□ -0.74
SNX4-205ENST00000482965 ICA1Q05084 483 aa10.43□□□□□ -0.74
SNX4-205ENST00000482965 CTDSPL2Q05D32 466 aa10.43□□□□□ -0.74
SNX4-205ENST00000482965 PABPC4Q13310 644 aaKnown RBP eCLIP10.43□□□□□ -0.74
SNX4-205ENST00000482965 DGKZQ13574 1117 aa10.43□□□□□ -0.74
SNX4-205ENST00000482965 ZYXQ15942 572 aaKnown RBP10.43□□□□□ -0.74
SNX4-205ENST00000482965 NOM1Q5C9Z4 860 aaKnown RBP10.43□□□□□ -0.74
SNX4-205ENST00000482965 TREML2Q5T2D2 321 aa10.43□□□□□ -0.74
SNX4-205ENST00000482965 COL13A1Q5TAT6 717 aaPredicted RBP10.43□□□□□ -0.74
SNX4-205ENST00000482965 USP17L2Q6R6M4 530 aa10.43□□□□□ -0.74
SNX4-205ENST00000482965 ACER1Q8TDN7 264 aa10.43□□□□□ -0.74
SNX4-205ENST00000482965 ZNF296Q8WUU4 475 aaPredicted RBP10.43□□□□□ -0.74
SNX4-205ENST00000482965 PARK7Q99497 189 aaKnown RBP10.43□□□□□ -0.74
SNX4-205ENST00000482965 ARHGEF10LQ9HCE6 1279 aa10.43□□□□□ -0.74
SNX4-205ENST00000482965 SLC45A1Q9Y2W3 748 aa10.43□□□□□ -0.74
SNX4-205ENST00000482965 TLR2O60603 784 aa10.42□□□□□ -0.74
SNX4-205ENST00000482965 ATP2B2Q01814 1243 aa10.42□□□□□ -0.74
SNX4-205ENST00000482965 BMP2KLQ5H9B9 411 aa10.42□□□□□ -0.74
SNX4-205ENST00000482965 CLEC10AQ8IUN9 316 aa10.42□□□□□ -0.74
SNX4-205ENST00000482965 DSCC1Q9BVC3 393 aa10.42□□□□□ -0.74
SNX4-205ENST00000482965 KIAA1683Q9H0B3 1180 aa10.42□□□□□ -0.74
SNX4-205ENST00000482965 KANSL2Q9H9L4 492 aa10.42□□□□□ -0.74
SNX4-205ENST00000482965 ANAPC4Q9UJX5 808 aa10.42□□□□□ -0.74
SNX4-205ENST00000482965 PNMA3Q9UL41 463 aa10.42□□□□□ -0.74
SNX4-205ENST00000482965 TSPY3P0CV98 308 aa10.41□□□□□ -0.74
SNX4-205ENST00000482965 TSPY8P0CW00 308 aa10.41□□□□□ -0.74
SNX4-205ENST00000482965 CYP2C8P10632 490 aa10.41□□□□□ -0.74
SNX4-205ENST00000482965 OSBPP22059 807 aa10.41□□□□□ -0.74
SNX4-205ENST00000482965 HAND2P61296 217 aa10.41□□□□□ -0.74
SNX4-205ENST00000482965 IRX3P78415 501 aaPredicted RBP10.41□□□□□ -0.74
SNX4-205ENST00000482965 SP3Q02447 781 aa10.41□□□□□ -0.74
SNX4-205ENST00000482965 SMCR8Q8TEV9 937 aaPredicted RBP10.41□□□□□ -0.74
SNX4-205ENST00000482965 ERO1AQ96HE7 468 aa10.41□□□□□ -0.74
SNX4-205ENST00000482965 C12orf42Q96LP6 360 aa10.41□□□□□ -0.74
SNX4-205ENST00000482965 IL25Q9H293 177 aa10.41□□□□□ -0.74
SNX4-205ENST00000482965 SH2D4AQ9H788 454 aa10.41□□□□□ -0.74
SNX4-205ENST00000482965 TOMM22Q9NS69 142 aa10.41□□□□□ -0.74
SNX4-205ENST00000482965 EMILIN3Q9NT22 766 aa10.41□□□□□ -0.74
SNX4-205ENST00000482965 CPA4Q9UI42 421 aa10.41□□□□□ -0.74
SNX4-205ENST00000482965 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.41□□□□□ -0.74
SNX4-205ENST00000482965 ADGRA2Q96PE1 1338 aa10.4□□□□□ -0.74
SNX4-205ENST00000482965 A0A1W2PRG0 241 aa10.4□□□□□ -0.74
SNX4-205ENST00000482965 ZNF213O14771 459 aa10.4□□□□□ -0.74
SNX4-205ENST00000482965 SGSM2O43147 1006 aa10.4□□□□□ -0.74
SNX4-205ENST00000482965 EEF2P13639 858 aaKnown RBP10.4□□□□□ -0.74
SNX4-205ENST00000482965 TFAP4Q01664 338 aa10.4□□□□□ -0.74
SNX4-205ENST00000482965 FAM47AQ5JRC9 791 aa10.4□□□□□ -0.74
SNX4-205ENST00000482965 RRP12Q5JTH9 1297 aaKnown RBP10.4□□□□□ -0.74
SNX4-205ENST00000482965 TNS4Q8IZW8 715 aa10.4□□□□□ -0.74
SNX4-205ENST00000482965 CD99L2Q8TCZ2 262 aa10.4□□□□□ -0.74
SNX4-205ENST00000482965 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.4□□□□□ -0.74
SNX4-205ENST00000482965 ASCC2Q9H1I8 757 aaPredicted RBP10.4□□□□□ -0.74
SNX4-205ENST00000482965 INCENPQ9NQS7 918 aa10.4□□□□□ -0.74
SNX4-205ENST00000482965 CTNNA3Q9UI47 895 aa10.4□□□□□ -0.74
SNX4-205ENST00000482965 TMX2Q9Y320 296 aa10.4□□□□□ -0.74
SNX4-205ENST00000482965 MGAMO43451 1857 aa10.4□□□□□ -0.75
SNX4-205ENST00000482965 PLIN4Q96Q06 1357 aa10.39□□□□□ -0.75
SNX4-205ENST00000482965 TSPY2A6NKD2 308 aa10.39□□□□□ -0.75
SNX4-205ENST00000482965 USP17L15C9J2P7 530 aa10.39□□□□□ -0.75
SNX4-205ENST00000482965 USP17L13C9JLJ4 530 aa10.39□□□□□ -0.75
SNX4-205ENST00000482965 USP17L11C9JVI0 530 aa10.39□□□□□ -0.75
SNX4-205ENST00000482965 USP17L18D6R9N7 530 aa10.39□□□□□ -0.75
SNX4-205ENST00000482965 USP17L22D6RA61 530 aa10.39□□□□□ -0.75
SNX4-205ENST00000482965 USP17L17D6RBQ6 530 aa10.39□□□□□ -0.75
SNX4-205ENST00000482965 USP17L19D6RCP7 530 aa10.39□□□□□ -0.75
SNX4-205ENST00000482965 USP17L20D6RJB6 530 aa10.39□□□□□ -0.75
SNX4-205ENST00000482965 ORC4O43929 436 aa10.39□□□□□ -0.75
SNX4-205ENST00000482965 RANBP6O60518 1105 aaKnown RBP10.39□□□□□ -0.75
SNX4-205ENST00000482965 VCAM1P19320 739 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms