RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 MICALL2Q8IY33 904 aa14.59□□□□□ -0.07
TSPAN1-208ENST00000482928 MTMR14Q8NCE2 650 aa14.59□□□□□ -0.07
TSPAN1-208ENST00000482928 DPF2Q92785 391 aa14.59□□□□□ -0.07
TSPAN1-208ENST00000482928 GTF3C6Q969F1 213 aa14.59□□□□□ -0.07
TSPAN1-208ENST00000482928 DDX4Q9NQI0 724 aaKnown RBP14.59□□□□□ -0.07
TSPAN1-208ENST00000482928 SERPINB13Q9UIV8 391 aa14.59□□□□□ -0.07
TSPAN1-208ENST00000482928 PCDHAC2Q9Y5I4 1007 aa14.59□□□□□ -0.07
TSPAN1-208ENST00000482928 CEP290O15078 2479 aa14.59□□□□□ -0.07
TSPAN1-208ENST00000482928 TNKSO95271 1327 aa14.59□□□□□ -0.07
TSPAN1-208ENST00000482928 POTEFA5A3E0 1075 aa14.58□□□□□ -0.08
TSPAN1-208ENST00000482928 TCP10L2B9ZVM9 353 aa14.58□□□□□ -0.08
TSPAN1-208ENST00000482928 CELF2O95319 508 aaKnown RBP14.58□□□□□ -0.08
TSPAN1-208ENST00000482928 PDIA3P30101 505 aaKnown RBP14.58□□□□□ -0.08
TSPAN1-208ENST00000482928 METAP2P50579 478 aaKnown RBP eCLIP14.58□□□□□ -0.08
TSPAN1-208ENST00000482928 CCT2P78371 535 aaKnown RBP14.58□□□□□ -0.08
TSPAN1-208ENST00000482928 TFAP4Q01664 338 aa14.58□□□□□ -0.08
TSPAN1-208ENST00000482928 NFIAQ12857 509 aa14.58□□□□□ -0.08
TSPAN1-208ENST00000482928 FAM47AQ5JRC9 791 aa14.58□□□□□ -0.08
TSPAN1-208ENST00000482928 CATIPQ7Z7H3 387 aa14.58□□□□□ -0.08
TSPAN1-208ENST00000482928 FAM184AQ8NB25 1140 aa14.58□□□□□ -0.08
TSPAN1-208ENST00000482928 LY9Q9HBG7 655 aa14.58□□□□□ -0.08
TSPAN1-208ENST00000482928 RNF186Q9NXI6 227 aa14.58□□□□□ -0.08
TSPAN1-208ENST00000482928 PI4KBQ9UBF8 816 aa14.58□□□□□ -0.08
TSPAN1-208ENST00000482928 ZNF70Q9UC06 446 aaPredicted RBP14.58□□□□□ -0.08
TSPAN1-208ENST00000482928 CNOT7Q9UIV1 285 aaKnown RBP14.58□□□□□ -0.08
TSPAN1-208ENST00000482928 GOLGA8AA7E2F4 631 aa14.57□□□□□ -0.08
TSPAN1-208ENST00000482928 CDKL5O76039 1030 aa14.57□□□□□ -0.08
TSPAN1-208ENST00000482928 PDCP20941 246 aa14.57□□□□□ -0.08
TSPAN1-208ENST00000482928 LMOD1P29536 600 aaPredicted RBP14.57□□□□□ -0.08
TSPAN1-208ENST00000482928 TNFAIP1Q13829 316 aa14.57□□□□□ -0.08
TSPAN1-208ENST00000482928 SPDYE2Q495Y8 402 aa14.57□□□□□ -0.08
TSPAN1-208ENST00000482928 SGMS1Q86VZ5 419 aa14.57□□□□□ -0.08
TSPAN1-208ENST00000482928 MICU3Q86XE3 530 aa14.57□□□□□ -0.08
TSPAN1-208ENST00000482928 GPC2Q8N158 579 aa14.57□□□□□ -0.08
TSPAN1-208ENST00000482928 IGDCC4Q8TDY8 1250 aa14.57□□□□□ -0.08
TSPAN1-208ENST00000482928 SNX27Q96L92 541 aa14.57□□□□□ -0.08
TSPAN1-208ENST00000482928 LLPHQ9BRT6 129 aaKnown RBP14.57□□□□□ -0.08
TSPAN1-208ENST00000482928 EHD4Q9H223 541 aa14.57□□□□□ -0.08
TSPAN1-208ENST00000482928 GPHNQ9NQX3 736 aaPredicted RBP14.57□□□□□ -0.08
TSPAN1-208ENST00000482928 RBM27Q9P2N5 1060 aaKnown RBP14.57□□□□□ -0.08
TSPAN1-208ENST00000482928 TAOK2Q9UL54 1235 aa14.57□□□□□ -0.08
TSPAN1-208ENST00000482928 TACC3Q9Y6A5 838 aa14.57□□□□□ -0.08
TSPAN1-208ENST00000482928 CCDC196A0A1B0GTZ2 297 aa14.56□□□□□ -0.08
TSPAN1-208ENST00000482928 H0YGN5 161 aa14.56□□□□□ -0.08
TSPAN1-208ENST00000482928 SMIM22K7EJ46 135 aa14.56□□□□□ -0.08
TSPAN1-208ENST00000482928 MPHOSPH10O00566 681 aaKnown RBP14.56□□□□□ -0.08
TSPAN1-208ENST00000482928 CALM1P0DP23 149 aa14.56□□□□□ -0.08
TSPAN1-208ENST00000482928 CALM2P0DP24 149 aa14.56□□□□□ -0.08
TSPAN1-208ENST00000482928 CALM3P0DP25 149 aa14.56□□□□□ -0.08
TSPAN1-208ENST00000482928 GJB2P29033 226 aa14.56□□□□□ -0.08
TSPAN1-208ENST00000482928 HOXD11P31277 338 aaPredicted RBP14.56□□□□□ -0.08
TSPAN1-208ENST00000482928 EVCP57679 992 aa14.56□□□□□ -0.08
TSPAN1-208ENST00000482928 ZNF280AP59817 542 aaPredicted RBP14.56□□□□□ -0.08
TSPAN1-208ENST00000482928 HMGN5P82970 282 aaKnown RBP14.56□□□□□ -0.08
TSPAN1-208ENST00000482928 EVX2Q03828 476 aa14.56□□□□□ -0.08
TSPAN1-208ENST00000482928 SCRN1Q12765 414 aa14.56□□□□□ -0.08
TSPAN1-208ENST00000482928 KIF4BQ2VIQ3 1234 aa14.56□□□□□ -0.08
TSPAN1-208ENST00000482928 PPP4R3BQ5MIZ7 849 aa14.56□□□□□ -0.08
TSPAN1-208ENST00000482928 FBXO46Q6PJ61 603 aaPredicted RBP14.56□□□□□ -0.08
TSPAN1-208ENST00000482928 APOA5Q6Q788 366 aa14.56□□□□□ -0.08
TSPAN1-208ENST00000482928 SLC44A5Q8NCS7 719 aa14.56□□□□□ -0.08
TSPAN1-208ENST00000482928 NUP133Q8WUM0 1156 aa14.56□□□□□ -0.08
TSPAN1-208ENST00000482928 KAT14Q9H8E8 782 aa14.56□□□□□ -0.08
TSPAN1-208ENST00000482928 FAM198AQ9UFP1 575 aa14.56□□□□□ -0.08
TSPAN1-208ENST00000482928 RAPGEFL1Q9UHV5 662 aa14.56□□□□□ -0.08
TSPAN1-208ENST00000482928 BRPF3Q9ULD4 1205 aa14.56□□□□□ -0.08
TSPAN1-208ENST00000482928 COL2A1P02458 1487 aaPredicted RBP14.56□□□□□ -0.08
TSPAN1-208ENST00000482928 PDIA4P13667 645 aaKnown RBP14.55□□□□□ -0.08
TSPAN1-208ENST00000482928 RASA1P20936 1047 aa14.55□□□□□ -0.08
TSPAN1-208ENST00000482928 TBC1D10BQ4KMP7 808 aaPredicted RBP14.55□□□□□ -0.08
TSPAN1-208ENST00000482928 FKBP1CQ5VVH2 108 aa14.55□□□□□ -0.08
TSPAN1-208ENST00000482928 RAB11FIP4Q86YS3 637 aa14.55□□□□□ -0.08
TSPAN1-208ENST00000482928 FOXP4Q8IVH2 680 aaPredicted RBP14.55□□□□□ -0.08
TSPAN1-208ENST00000482928 ZNF654Q8IZM8 581 aa14.55□□□□□ -0.08
TSPAN1-208ENST00000482928 FAM151AQ8WW52 585 aa14.55□□□□□ -0.08
TSPAN1-208ENST00000482928 CSRNP1Q96S65 589 aa14.55□□□□□ -0.08
TSPAN1-208ENST00000482928 WNT10BO00744 389 aa14.54□□□□□ -0.08
TSPAN1-208ENST00000482928 RCAN1P53805 252 aa14.54□□□□□ -0.08
TSPAN1-208ENST00000482928 RTN1Q16799 776 aa14.54□□□□□ -0.08
TSPAN1-208ENST00000482928 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.54□□□□□ -0.08
TSPAN1-208ENST00000482928 CCDC144CPQ8IYA2 1237 aa14.54□□□□□ -0.08
TSPAN1-208ENST00000482928 ENAHQ8N8S7 591 aaPredicted RBP14.54□□□□□ -0.08
TSPAN1-208ENST00000482928 CCDC17Q96LX7 622 aa14.54□□□□□ -0.08
TSPAN1-208ENST00000482928 ZNF408Q9H9D4 720 aa14.54□□□□□ -0.08
TSPAN1-208ENST00000482928 NCOA5Q9HCD5 579 aaKnown RBP14.54□□□□□ -0.08
TSPAN1-208ENST00000482928 STX8Q9UNK0 236 aa14.54□□□□□ -0.08
TSPAN1-208ENST00000482928 MYH8P13535 1937 aa14.54□□□□□ -0.08
TSPAN1-208ENST00000482928 PTPDC1A2A3K4 754 aa14.53□□□□□ -0.08
TSPAN1-208ENST00000482928 DDTLA6NHG4 134 aaPredicted RBP14.53□□□□□ -0.08
TSPAN1-208ENST00000482928 DDAH1O94760 285 aa14.53□□□□□ -0.08
TSPAN1-208ENST00000482928 PPP2R5BQ15173 497 aa14.53□□□□□ -0.08
TSPAN1-208ENST00000482928 NBPF9Q3BBW0 867 aa14.53□□□□□ -0.08
TSPAN1-208ENST00000482928 FAM83AQ86UY5 434 aa14.53□□□□□ -0.08
TSPAN1-208ENST00000482928 DGKHQ86XP1 1220 aa14.53□□□□□ -0.08
TSPAN1-208ENST00000482928 ZFPM1Q8IX07 1006 aa14.53□□□□□ -0.08
TSPAN1-208ENST00000482928 NEDD1Q8NHV4 660 aa14.53□□□□□ -0.08
TSPAN1-208ENST00000482928 CTCFLQ8NI51 663 aaPredicted RBP14.53□□□□□ -0.08
TSPAN1-208ENST00000482928 DDX11Q96FC9 970 aa14.53□□□□□ -0.08
TSPAN1-208ENST00000482928 GBP4Q96PP9 640 aa14.53□□□□□ -0.08
TSPAN1-208ENST00000482928 MYL10Q9BUA6 226 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms