RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 NAPBQ9H115 298 aa14.08□□□□□ -0.16
CCDC78-213ENST00000482878 SEC31BQ9NQW1 1179 aa14.08□□□□□ -0.16
CCDC78-213ENST00000482878 PCDHB6Q9Y5E3 794 aa14.08□□□□□ -0.16
CCDC78-213ENST00000482878 IRS4O14654 1257 aaPredicted RBP14.08□□□□□ -0.16
CCDC78-213ENST00000482878 MBD4O95243 580 aa14.08□□□□□ -0.16
CCDC78-213ENST00000482878 SARSP49591 514 aaKnown RBP14.08□□□□□ -0.16
CCDC78-213ENST00000482878 LIG3P49916 1009 aa14.08□□□□□ -0.16
CCDC78-213ENST00000482878 CORO7P57737 925 aa14.08□□□□□ -0.16
CCDC78-213ENST00000482878 ALX1Q15699 326 aa14.08□□□□□ -0.16
CCDC78-213ENST00000482878 FAM182BQ5T319 152 aa14.08□□□□□ -0.16
CCDC78-213ENST00000482878 NT5DC1Q5TFE4 455 aa14.08□□□□□ -0.16
CCDC78-213ENST00000482878 SPECC1LQ69YQ0 1117 aa14.08□□□□□ -0.16
CCDC78-213ENST00000482878 ELOA2Q8IYF1 753 aaPredicted RBP14.08□□□□□ -0.16
CCDC78-213ENST00000482878 IQUBQ8NA54 791 aa14.08□□□□□ -0.16
CCDC78-213ENST00000482878 ARMT1Q9H993 441 aa14.08□□□□□ -0.16
CCDC78-213ENST00000482878 MKRN1Q9UHC7 482 aaKnown RBP14.08□□□□□ -0.16
CCDC78-213ENST00000482878 SLC4A8Q2Y0W8 1093 aa14.07□□□□□ -0.16
CCDC78-213ENST00000482878 USP49Q70CQ1 688 aa14.07□□□□□ -0.16
CCDC78-213ENST00000482878 MAGEB6Q8N7X4 407 aa14.07□□□□□ -0.16
CCDC78-213ENST00000482878 MPHOSPH8Q99549 860 aa14.07□□□□□ -0.16
CCDC78-213ENST00000482878 SAMSN1Q9NSI8 373 aaKnown RBP14.07□□□□□ -0.16
CCDC78-213ENST00000482878 PRKAB2O43741 272 aa14.07□□□□□ -0.16
CCDC78-213ENST00000482878 STX10O60499 249 aa14.07□□□□□ -0.16
CCDC78-213ENST00000482878 MORC3Q14149 939 aa14.07□□□□□ -0.16
CCDC78-213ENST00000482878 DNAJC21Q5F1R6 531 aaKnown RBP14.07□□□□□ -0.16
CCDC78-213ENST00000482878 CCDC12Q8WUD4 166 aaPredicted RBP14.07□□□□□ -0.16
CCDC78-213ENST00000482878 DESI2Q9BSY9 194 aa14.07□□□□□ -0.16
CCDC78-213ENST00000482878 HOOK1Q9UJC3 728 aaKnown RBP14.07□□□□□ -0.16
CCDC78-213ENST00000482878 PAPPAQ13219 1627 aa14.07□□□□□ -0.16
CCDC78-213ENST00000482878 AKAP11Q9UKA4 1901 aa14.07□□□□□ -0.16
CCDC78-213ENST00000482878 EXOC5O00471 708 aa14.07□□□□□ -0.16
CCDC78-213ENST00000482878 ERLIN1O75477 346 aa14.07□□□□□ -0.16
CCDC78-213ENST00000482878 IBSPP21815 317 aaPredicted RBP14.07□□□□□ -0.16
CCDC78-213ENST00000482878 MAP3K9P80192 1104 aa14.07□□□□□ -0.16
CCDC78-213ENST00000482878 SAFBQ15424 915 aaKnown RBP eCLIP14.07□□□□□ -0.16
CCDC78-213ENST00000482878 HDXQ7Z353 690 aa14.07□□□□□ -0.16
CCDC78-213ENST00000482878 ENOX1Q8TC92 643 aaKnown RBP14.07□□□□□ -0.16
CCDC78-213ENST00000482878 MTMR7Q9Y216 660 aa14.07□□□□□ -0.16
CCDC78-213ENST00000482878 STARD3NLO95772 234 aa14.06□□□□□ -0.16
CCDC78-213ENST00000482878 KARSQ15046 597 aaKnown RBP14.06□□□□□ -0.16
CCDC78-213ENST00000482878 AKNAD1Q5T1N1 836 aa14.06□□□□□ -0.16
CCDC78-213ENST00000482878 TADA2BQ86TJ2 420 aa14.06□□□□□ -0.16
CCDC78-213ENST00000482878 MLKLQ8NB16 471 aa14.06□□□□□ -0.16
CCDC78-213ENST00000482878 OXER1Q8TDS5 423 aa14.06□□□□□ -0.16
CCDC78-213ENST00000482878 RABGGTAQ92696 567 aa14.06□□□□□ -0.16
CCDC78-213ENST00000482878 GSG1L2A8MUP6 293 aa14.06□□□□□ -0.16
CCDC78-213ENST00000482878 PIGBQ92521 554 aa14.06□□□□□ -0.16
CCDC78-213ENST00000482878 KDM4FA0A1W2PPD8 638 aa14.06□□□□□ -0.16
CCDC78-213ENST00000482878 SETQ01105 290 aaPredicted RBP14.06□□□□□ -0.16
CCDC78-213ENST00000482878 MTF1Q14872 753 aa14.06□□□□□ -0.16
CCDC78-213ENST00000482878 RILPL1Q5EBL4 403 aa14.06□□□□□ -0.16
CCDC78-213ENST00000482878 EFCAB13Q8IY85 973 aa14.06□□□□□ -0.16
CCDC78-213ENST00000482878 SPATA5Q8NB90 893 aa14.06□□□□□ -0.16
CCDC78-213ENST00000482878 WASF1Q92558 559 aa14.06□□□□□ -0.16
CCDC78-213ENST00000482878 KIFC2Q96AC6 838 aa14.06□□□□□ -0.16
CCDC78-213ENST00000482878 SUGCTQ9HAC7 445 aa14.06□□□□□ -0.16
CCDC78-213ENST00000482878 COL5A2P05997 1499 aaPredicted RBP14.05□□□□□ -0.16
CCDC78-213ENST00000482878 ACTN4O43707 911 aaKnown RBP14.05□□□□□ -0.16
CCDC78-213ENST00000482878 ERLIN2O94905 339 aa14.05□□□□□ -0.16
CCDC78-213ENST00000482878 UQCRFS1P1P0C7P4 283 aa14.05□□□□□ -0.16
CCDC78-213ENST00000482878 TXLNAP40222 546 aa14.05□□□□□ -0.16
CCDC78-213ENST00000482878 RTN1Q16799 776 aa14.05□□□□□ -0.16
CCDC78-213ENST00000482878 MFSD6Q6ZSS7 791 aa14.05□□□□□ -0.16
CCDC78-213ENST00000482878 CARD10Q9BWT7 1032 aa14.05□□□□□ -0.16
CCDC78-213ENST00000482878 FOXP1Q9H334 677 aaPredicted RBP14.05□□□□□ -0.16
CCDC78-213ENST00000482878 MRFAP1Q9Y605 127 aa14.05□□□□□ -0.16
CCDC78-213ENST00000482878 CCDC151A5D8V7 595 aa14.05□□□□□ -0.16
CCDC78-213ENST00000482878 RHOXF2BP0C7M4 288 aa14.05□□□□□ -0.16
CCDC78-213ENST00000482878 RASGRF1Q13972 1273 aa14.05□□□□□ -0.16
CCDC78-213ENST00000482878 NR1I3Q14994 352 aa14.05□□□□□ -0.16
CCDC78-213ENST00000482878 DHX58Q96C10 678 aa14.05□□□□□ -0.16
CCDC78-213ENST00000482878 RHOXF2Q9BQY4 288 aa14.05□□□□□ -0.16
CCDC78-213ENST00000482878 TEX13AQ9BXU3 409 aaPredicted RBP14.05□□□□□ -0.16
CCDC78-213ENST00000482878 RABEP2Q9H5N1 569 aa14.05□□□□□ -0.16
CCDC78-213ENST00000482878 FGFR2P21802 821 aa14.05□□□□□ -0.16
CCDC78-213ENST00000482878 PUM3Q15397 648 aaKnown RBP14.05□□□□□ -0.16
CCDC78-213ENST00000482878 TRIM22Q8IYM9 498 aa14.05□□□□□ -0.16
CCDC78-213ENST00000482878 CRACR2BQ8N4Y2 399 aaPredicted RBP14.05□□□□□ -0.16
CCDC78-213ENST00000482878 LPIN2Q92539 896 aa14.05□□□□□ -0.16
CCDC78-213ENST00000482878 IRX2Q9BZI1 471 aaPredicted RBP14.05□□□□□ -0.16
CCDC78-213ENST00000482878 CSRNP2Q9H175 543 aa14.05□□□□□ -0.16
CCDC78-213ENST00000482878 RAI14Q9P0K7 980 aa14.05□□□□□ -0.16
CCDC78-213ENST00000482878 DCCP43146 1447 aa14.04□□□□□ -0.16
CCDC78-213ENST00000482878 GOLGA6L9A6NEM1 432 aa14.04□□□□□ -0.16
CCDC78-213ENST00000482878 KRT23Q9C075 422 aa14.04□□□□□ -0.16
CCDC78-213ENST00000482878 CNNM2Q9H8M5 875 aa14.04□□□□□ -0.16
CCDC78-213ENST00000482878 MRPL44Q9H9J2 332 aaKnown RBP14.04□□□□□ -0.16
CCDC78-213ENST00000482878 CABP5Q9NP86 173 aa14.04□□□□□ -0.16
CCDC78-213ENST00000482878 DONSONQ9NYP3 566 aa14.04□□□□□ -0.16
CCDC78-213ENST00000482878 ABCF2Q9UG63 623 aa14.04□□□□□ -0.16
CCDC78-213ENST00000482878 SRPRBQ9Y5M8 271 aaKnown RBP14.04□□□□□ -0.16
CCDC78-213ENST00000482878 MYH7P12883 1935 aa14.04□□□□□ -0.16
CCDC78-213ENST00000482878 TEX33O43247 280 aa14.04□□□□□ -0.16
CCDC78-213ENST00000482878 CHMP4BP1P59074 171 aa14.04□□□□□ -0.16
CCDC78-213ENST00000482878 MAP3K12Q12852 859 aa14.04□□□□□ -0.16
CCDC78-213ENST00000482878 WTAPQ15007 396 aa14.04□□□□□ -0.16
CCDC78-213ENST00000482878 BRD3Q15059 726 aa14.04□□□□□ -0.16
CCDC78-213ENST00000482878 LRRC31Q6UY01 552 aa14.04□□□□□ -0.16
CCDC78-213ENST00000482878 LCORLQ8N3X6 602 aa14.04□□□□□ -0.16
CCDC78-213ENST00000482878 DACH1Q9UI36 760 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms