RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 SHMT1P34896 483 aa16.24■□□□□ 0.19
CTDSP1-208ENST00000482272 USP17L24Q0WX57 530 aa16.24■□□□□ 0.19
CTDSP1-208ENST00000482272 SDR42E1Q8WUS8 393 aa16.24■□□□□ 0.19
CTDSP1-208ENST00000482272 C12orf42Q96LP6 360 aa16.24■□□□□ 0.19
CTDSP1-208ENST00000482272 HAUS7Q99871 368 aa16.24■□□□□ 0.19
CTDSP1-208ENST00000482272 HTATIP2Q9BUP3 242 aa16.24■□□□□ 0.19
CTDSP1-208ENST00000482272 DCP1AQ9NPI6 582 aaPredicted RBP16.24■□□□□ 0.19
CTDSP1-208ENST00000482272 RBPJLQ9UBG7 517 aa16.24■□□□□ 0.19
CTDSP1-208ENST00000482272 GJD2Q9UKL4 321 aa16.24■□□□□ 0.19
CTDSP1-208ENST00000482272 CYP2D6P10635 497 aa16.23■□□□□ 0.19
CTDSP1-208ENST00000482272 MAPK4P31152 587 aa16.23■□□□□ 0.19
CTDSP1-208ENST00000482272 GUCY1A2P33402 732 aa16.23■□□□□ 0.19
CTDSP1-208ENST00000482272 ADD2P35612 726 aa16.23■□□□□ 0.19
CTDSP1-208ENST00000482272 GABPAQ06546 454 aa16.23■□□□□ 0.19
CTDSP1-208ENST00000482272 ZYXQ15942 572 aaKnown RBP16.23■□□□□ 0.19
CTDSP1-208ENST00000482272 ZSCAN25Q6NSZ9 544 aa16.23■□□□□ 0.19
CTDSP1-208ENST00000482272 DEFB118Q96PH6 123 aa16.23■□□□□ 0.19
CTDSP1-208ENST00000482272 NUDT12Q9BQG2 462 aa16.23■□□□□ 0.19
CTDSP1-208ENST00000482272 KIAA1683Q9H0B3 1180 aa16.23■□□□□ 0.19
CTDSP1-208ENST00000482272 ARMT1Q9H993 441 aa16.23■□□□□ 0.19
CTDSP1-208ENST00000482272 ATP8A2Q9NTI2 1148 aa16.23■□□□□ 0.19
CTDSP1-208ENST00000482272 MYH8P13535 1937 aa16.22■□□□□ 0.19
CTDSP1-208ENST00000482272 MPHOSPH10O00566 681 aaKnown RBP16.22■□□□□ 0.19
CTDSP1-208ENST00000482272 PRKAB2O43741 272 aa16.22■□□□□ 0.19
CTDSP1-208ENST00000482272 HMGCRP04035 888 aa16.22■□□□□ 0.19
CTDSP1-208ENST00000482272 ERVK-9P63128 1117 aa16.22■□□□□ 0.19
CTDSP1-208ENST00000482272 ERVK-24P63145 666 aa16.22■□□□□ 0.19
CTDSP1-208ENST00000482272 UBE3CQ15386 1083 aa16.22■□□□□ 0.19
CTDSP1-208ENST00000482272 Q3C1V9 767 aa16.22■□□□□ 0.19
CTDSP1-208ENST00000482272 TSHZ3Q63HK5 1081 aa16.22■□□□□ 0.19
CTDSP1-208ENST00000482272 CATSPERGQ6ZRH7 1159 aa16.22■□□□□ 0.19
CTDSP1-208ENST00000482272 AMOTL1Q8IY63 956 aa16.22■□□□□ 0.19
CTDSP1-208ENST00000482272 DDRGK1Q96HY6 314 aa16.22■□□□□ 0.19
CTDSP1-208ENST00000482272 PAGR1Q9BTK6 254 aa16.22■□□□□ 0.19
CTDSP1-208ENST00000482272 TXNRD2Q9NNW7 524 aa16.22■□□□□ 0.19
CTDSP1-208ENST00000482272 PAK6Q9NQU5 681 aaPredicted RBP16.22■□□□□ 0.19
CTDSP1-208ENST00000482272 SWAP70Q9UH65 585 aa16.22■□□□□ 0.19
CTDSP1-208ENST00000482272 FARP2O94887 1054 aaPredicted RBP16.21■□□□□ 0.19
CTDSP1-208ENST00000482272 CYP2B6P20813 491 aa16.21■□□□□ 0.19
CTDSP1-208ENST00000482272 CCNA1P78396 465 aa16.21■□□□□ 0.19
CTDSP1-208ENST00000482272 HABP4Q5JVS0 413 aaKnown RBP16.21■□□□□ 0.19
CTDSP1-208ENST00000482272 SLC44A5Q8NCS7 719 aa16.21■□□□□ 0.19
CTDSP1-208ENST00000482272 ACER1Q8TDN7 264 aa16.21■□□□□ 0.19
CTDSP1-208ENST00000482272 SOCS4Q8WXH5 440 aa16.21■□□□□ 0.19
CTDSP1-208ENST00000482272 CWC22Q9HCG8 908 aaKnown RBP16.21■□□□□ 0.19
CTDSP1-208ENST00000482272 HMX1Q9NP08 348 aaPredicted RBP16.21■□□□□ 0.19
CTDSP1-208ENST00000482272 RABGAP1Q9Y3P9 1069 aa16.21■□□□□ 0.19
CTDSP1-208ENST00000482272 PCDHB15Q9Y5E8 787 aa16.21■□□□□ 0.19
CTDSP1-208ENST00000482272 RPTORQ8N122 1335 aa16.2■□□□□ 0.18
CTDSP1-208ENST00000482272 MBD4O95243 580 aa16.2■□□□□ 0.18
CTDSP1-208ENST00000482272 SEPT2Q15019 361 aa16.2■□□□□ 0.18
CTDSP1-208ENST00000482272 UBE2Q1Q7Z7E8 422 aa16.2■□□□□ 0.18
CTDSP1-208ENST00000482272 TRMT44Q8IYL2 757 aaKnown RBP16.2■□□□□ 0.18
CTDSP1-208ENST00000482272 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.2■□□□□ 0.181e-6■■□□□ 12.9
CTDSP1-208ENST00000482272 DCTPP1Q9H773 170 aa16.2■□□□□ 0.18
CTDSP1-208ENST00000482272 ECHDC1Q9NTX5 307 aa16.2■□□□□ 0.18
CTDSP1-208ENST00000482272 RLFQ13129 1914 aa16.19■□□□□ 0.18
CTDSP1-208ENST00000482272 CYP2D7A0A087X1C5 515 aa16.19■□□□□ 0.18
CTDSP1-208ENST00000482272 H0YGN5 161 aa16.19■□□□□ 0.18
CTDSP1-208ENST00000482272 GLRX3O76003 335 aaKnown RBP16.19■□□□□ 0.18
CTDSP1-208ENST00000482272 XRCC5P13010 732 aaKnown RBP16.19■□□□□ 0.18
CTDSP1-208ENST00000482272 VCAM1P19320 739 aa16.19■□□□□ 0.18
CTDSP1-208ENST00000482272 TMEM179Q6ZVK1 233 aa16.19■□□□□ 0.18
CTDSP1-208ENST00000482272 GPR142Q7Z601 462 aa16.19■□□□□ 0.18
CTDSP1-208ENST00000482272 PLEKHH3Q7Z736 793 aa16.19■□□□□ 0.18
CTDSP1-208ENST00000482272 GPATCH3Q96I76 525 aa16.19■□□□□ 0.18
CTDSP1-208ENST00000482272 PARP14Q460N5 1801 aa16.18■□□□□ 0.18
CTDSP1-208ENST00000482272 RGS2P41220 211 aa16.18■□□□□ 0.18
CTDSP1-208ENST00000482272 DYNLL2Q96FJ2 89 aa16.18■□□□□ 0.18
CTDSP1-208ENST00000482272 CRISPLD2Q9H0B8 497 aa16.18■□□□□ 0.18
CTDSP1-208ENST00000482272 PORCNQ9H237 461 aa16.18■□□□□ 0.18
CTDSP1-208ENST00000482272 RPAP3Q9H6T3 665 aaPredicted RBP16.18■□□□□ 0.18
CTDSP1-208ENST00000482272 HOXC10Q9NYD6 342 aa16.18■□□□□ 0.18
CTDSP1-208ENST00000482272 NR2E3Q9Y5X4 410 aa16.18■□□□□ 0.18
CTDSP1-208ENST00000482272 SLC4A4Q9Y6R1 1079 aa16.18■□□□□ 0.18
CTDSP1-208ENST00000482272 A0A0G2JMZ2 1700 aa16.17■□□□□ 0.18
CTDSP1-208ENST00000482272 A0A1W2PRG0 241 aa16.17■□□□□ 0.18
CTDSP1-208ENST00000482272 USP17L12C9JPN9 530 aa16.17■□□□□ 0.18
CTDSP1-208ENST00000482272 USP17L21D6R901 530 aa16.17■□□□□ 0.18
CTDSP1-208ENST00000482272 CNMDO75829 334 aa16.17■□□□□ 0.18
CTDSP1-208ENST00000482272 TRIM32Q13049 653 aa16.17■□□□□ 0.18
CTDSP1-208ENST00000482272 COG2Q14746 738 aa16.17■□□□□ 0.18
CTDSP1-208ENST00000482272 KIAA1755Q5JYT7 1200 aa16.17■□□□□ 0.18
CTDSP1-208ENST00000482272 C12orf60Q5U649 245 aa16.17■□□□□ 0.18
CTDSP1-208ENST00000482272 LBX2Q6XYB7 198 aa16.17■□□□□ 0.18
CTDSP1-208ENST00000482272 CLEC10AQ8IUN9 316 aa16.17■□□□□ 0.18
CTDSP1-208ENST00000482272 ANKLE1Q8NAG6 615 aa16.17■□□□□ 0.18
CTDSP1-208ENST00000482272 OTUD7AQ8TE49 926 aaPredicted RBP16.17■□□□□ 0.18
CTDSP1-208ENST00000482272 TRIB2Q92519 343 aa16.17■□□□□ 0.18
CTDSP1-208ENST00000482272 CCDC17Q96LX7 622 aa16.17■□□□□ 0.18
CTDSP1-208ENST00000482272 PUS7LQ9H0K6 701 aaKnown RBP16.17■□□□□ 0.18
CTDSP1-208ENST00000482272 COLQQ9Y215 455 aaPredicted RBP16.17■□□□□ 0.18
CTDSP1-208ENST00000482272 GREB1LQ9C091 1923 aaPredicted RBP16.16■□□□□ 0.18
CTDSP1-208ENST00000482272 ZKSCAN1P17029 563 aaPredicted RBP16.16■□□□□ 0.18
CTDSP1-208ENST00000482272 CDK8P49336 464 aa16.16■□□□□ 0.18
CTDSP1-208ENST00000482272 RRP1P56182 461 aaKnown RBP16.16■□□□□ 0.18
CTDSP1-208ENST00000482272 MORN1Q5T089 497 aa16.16■□□□□ 0.18
CTDSP1-208ENST00000482272 WDR78Q5VTH9 848 aa16.16■□□□□ 0.18
CTDSP1-208ENST00000482272 NECAB2Q7Z6G3 386 aa16.16■□□□□ 0.18
CTDSP1-208ENST00000482272 USP6NLQ92738 828 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms