RNA–Protein interactions for RNA: ENST00000482183.1

CAPN8-208, Transcript of calpain 8, human

TSL 2

Gene CAPN8, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN8-208	ENST00000482183	MECOM	Q03112	1051 aa		11.44	□□□□□ -0.58
CAPN8-208	ENST00000482183	TROAP	Q12815	778 aa		11.44	□□□□□ -0.58
CAPN8-208	ENST00000482183	STIM1	Q13586	685 aa		11.44	□□□□□ -0.58
CAPN8-208	ENST00000482183	CTR9	Q6PD62	1173 aa		11.44	□□□□□ -0.58
CAPN8-208	ENST00000482183	CCDC144CP	Q8IYA2	1237 aa		11.44	□□□□□ -0.58
CAPN8-208	ENST00000482183	CCAR2	Q8N163	923 aa	Known RBP	11.44	□□□□□ -0.58
CAPN8-208	ENST00000482183	LINC00116	Q8NCU8	138 aa		11.44	□□□□□ -0.58
CAPN8-208	ENST00000482183	IQCD	Q96DY2	449 aa		11.44	□□□□□ -0.58
CAPN8-208	ENST00000482183	RBM17	Q96I25	401 aa	Known RBP	11.44	□□□□□ -0.58
CAPN8-208	ENST00000482183	XPO4	Q9C0E2	1151 aa	Known RBP	11.44	□□□□□ -0.58
CAPN8-208	ENST00000482183	TMX4	Q9H1E5	349 aa	Predicted RBP	11.44	□□□□□ -0.58
CAPN8-208	ENST00000482183	MKNK2	Q9HBH9	465 aa		11.44	□□□□□ -0.58
CAPN8-208	ENST00000482183	CABP5	Q9NP86	173 aa		11.44	□□□□□ -0.58
CAPN8-208	ENST00000482183	DCP1A	Q9NPI6	582 aa	Predicted RBP	11.44	□□□□□ -0.58
CAPN8-208	ENST00000482183	CCNL1	Q9UK58	526 aa	Predicted RBP	11.44	□□□□□ -0.58
CAPN8-208	ENST00000482183	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
CAPN8-208	ENST00000482183	PCDHA5	Q9Y5H7	936 aa		11.44	□□□□□ -0.58
CAPN8-208	ENST00000482183	ROBO3	Q96MS0	1386 aa		11.43	□□□□□ -0.58
CAPN8-208	ENST00000482183	GNPAT	O15228	680 aa		11.43	□□□□□ -0.58
CAPN8-208	ENST00000482183	POLR2D	O15514	142 aa	Known RBP	11.43	□□□□□ -0.58
CAPN8-208	ENST00000482183	PRKAB2	O43741	272 aa		11.43	□□□□□ -0.58
CAPN8-208	ENST00000482183	GNA11	P29992	359 aa		11.43	□□□□□ -0.58
CAPN8-208	ENST00000482183	SARS	P49591	514 aa	Known RBP	11.43	□□□□□ -0.58
CAPN8-208	ENST00000482183	PLCD1	P51178	756 aa		11.43	□□□□□ -0.58
CAPN8-208	ENST00000482183	PFKFB3	Q16875	520 aa	Predicted RBP	11.43	□□□□□ -0.58
CAPN8-208	ENST00000482183	LONRF3	Q496Y0	759 aa		11.43	□□□□□ -0.58
CAPN8-208	ENST00000482183	SLC27A3	Q5K4L6	730 aa		11.43	□□□□□ -0.58
CAPN8-208	ENST00000482183	TBC1D9B	Q66K14	1250 aa		11.43	□□□□□ -0.58
CAPN8-208	ENST00000482183	TMC6	Q7Z403	805 aa		11.43	□□□□□ -0.58
CAPN8-208	ENST00000482183	VSTM4	Q8IW00	320 aa		11.43	□□□□□ -0.58
CAPN8-208	ENST00000482183	DAGLB	Q8NCG7	672 aa		11.43	□□□□□ -0.58
CAPN8-208	ENST00000482183	SPATA20	Q8TB22	786 aa		11.43	□□□□□ -0.58
CAPN8-208	ENST00000482183	RPGR	Q92834	1020 aa	Known RBP	11.43	□□□□□ -0.58
CAPN8-208	ENST00000482183	ERO1A	Q96HE7	468 aa		11.43	□□□□□ -0.58
CAPN8-208	ENST00000482183	AK8	Q96MA6	479 aa		11.43	□□□□□ -0.58
CAPN8-208	ENST00000482183	LRRC27	Q9C0I9	530 aa		11.43	□□□□□ -0.58
CAPN8-208	ENST00000482183	ANKIB1	Q9P2G1	1089 aa		11.43	□□□□□ -0.58
CAPN8-208	ENST00000482183	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
CAPN8-208	ENST00000482183	RXRA	P19793	462 aa		11.42	□□□□□ -0.58
CAPN8-208	ENST00000482183	PRPH	P41219	470 aa		11.42	□□□□□ -0.58
CAPN8-208	ENST00000482183	FAM193A	P78312	1265 aa		11.42	□□□□□ -0.58
CAPN8-208	ENST00000482183	ATP2C1	P98194	919 aa	Predicted RBP	11.42	□□□□□ -0.58
CAPN8-208	ENST00000482183	MDM2	Q00987	491 aa	Predicted RBP	11.42	□□□□□ -0.58
CAPN8-208	ENST00000482183	AMPD3	Q01432	767 aa		11.42	□□□□□ -0.58
CAPN8-208	ENST00000482183	MORC3	Q14149	939 aa		11.42	□□□□□ -0.58
CAPN8-208	ENST00000482183	NCAPH	Q15003	741 aa		11.42	□□□□□ -0.58
CAPN8-208	ENST00000482183	FAM98C	Q17RN3	349 aa	Known RBP	11.42	□□□□□ -0.58
CAPN8-208	ENST00000482183	TTC38	Q5R3I4	469 aa		11.42	□□□□□ -0.58
CAPN8-208	ENST00000482183	SPATA1	Q5VX52	437 aa		11.42	□□□□□ -0.58
CAPN8-208	ENST00000482183	SPECC1L	Q69YQ0	1117 aa		11.42	□□□□□ -0.58
CAPN8-208	ENST00000482183	NYAP1	Q6ZVC0	841 aa		11.42	□□□□□ -0.58
CAPN8-208	ENST00000482183	CNBD1	Q8NA66	436 aa		11.42	□□□□□ -0.58
CAPN8-208	ENST00000482183	NOC3L	Q8WTT2	800 aa	Known RBP	11.42	□□□□□ -0.58
CAPN8-208	ENST00000482183	SDR42E1	Q8WUS8	393 aa		11.42	□□□□□ -0.58
CAPN8-208	ENST00000482183	C16orf45	Q96MC5	204 aa	Predicted RBP	11.42	□□□□□ -0.58
CAPN8-208	ENST00000482183	NAP1L4	Q99733	375 aa	Known RBP	11.42	□□□□□ -0.58
CAPN8-208	ENST00000482183	CCDC94	Q9BW85	323 aa	Predicted RBP	11.42	□□□□□ -0.58
CAPN8-208	ENST00000482183	GLT8D2	Q9H1C3	349 aa		11.42	□□□□□ -0.58
CAPN8-208	ENST00000482183		V9GY48	417 aa	Predicted RBP	11.42	□□□□□ -0.58
CAPN8-208	ENST00000482183	COL24A1	Q17RW2	1714 aa		11.42	□□□□□ -0.58
CAPN8-208	ENST00000482183	PHLPP2	Q6ZVD8	1323 aa		11.41	□□□□□ -0.58
CAPN8-208	ENST00000482183	KIAA1551	Q9HCM1	1747 aa		11.41	□□□□□ -0.58
CAPN8-208	ENST00000482183	CCDC194	A0A1B0GVG4	234 aa		11.41	□□□□□ -0.58
CAPN8-208	ENST00000482183	RIOK3	O14730	519 aa	Known RBP	11.41	□□□□□ -0.58
CAPN8-208	ENST00000482183	TSPY3	P0CV98	308 aa		11.41	□□□□□ -0.58
CAPN8-208	ENST00000482183	TSPY8	P0CW00	308 aa		11.41	□□□□□ -0.58
CAPN8-208	ENST00000482183	CCZ1B	P86790	482 aa		11.41	□□□□□ -0.58
CAPN8-208	ENST00000482183	CCZ1	P86791	482 aa	Predicted RBP	11.41	□□□□□ -0.58
CAPN8-208	ENST00000482183	C12orf60	Q5U649	245 aa		11.41	□□□□□ -0.58
CAPN8-208	ENST00000482183	MCTP2	Q6DN12	878 aa		11.41	□□□□□ -0.58
CAPN8-208	ENST00000482183	METTL16	Q86W50	562 aa	Known RBP	11.41	□□□□□ -0.58
CAPN8-208	ENST00000482183	PPFIBP1	Q86W92	1011 aa		11.41	□□□□□ -0.58
CAPN8-208	ENST00000482183	RAB11FIP4	Q86YS3	637 aa		11.41	□□□□□ -0.58
CAPN8-208	ENST00000482183	CNGA4	Q8IV77	575 aa		11.41	□□□□□ -0.58
CAPN8-208	ENST00000482183	TEX2	Q8IWB9	1127 aa		11.41	□□□□□ -0.58
CAPN8-208	ENST00000482183	STK11IP	Q8N1F8	1099 aa		11.41	□□□□□ -0.58
CAPN8-208	ENST00000482183	CELF1	Q92879	486 aa	Known RBP	11.41	□□□□□ -0.58
CAPN8-208	ENST00000482183	FAM163A	Q96GL9	167 aa	Predicted RBP	11.41	□□□□□ -0.58
CAPN8-208	ENST00000482183	MYL10	Q9BUA6	226 aa		11.41	□□□□□ -0.58
CAPN8-208	ENST00000482183	RAB34	Q9BZG1	259 aa		11.41	□□□□□ -0.58
CAPN8-208	ENST00000482183	ARGLU1	Q9NWB6	273 aa	Predicted RBP	11.41	□□□□□ -0.58
CAPN8-208	ENST00000482183	MCM9	Q9NXL9	1143 aa		11.41	□□□□□ -0.58
CAPN8-208	ENST00000482183	NRBP1	Q9UHY1	535 aa		11.41	□□□□□ -0.58
CAPN8-208	ENST00000482183	PCDHA4	Q9UN74	947 aa		11.41	□□□□□ -0.58
CAPN8-208	ENST00000482183	CCDC88A	Q3V6T2	1871 aa		11.4	□□□□□ -0.58
CAPN8-208	ENST00000482183	MROH7-TTC4	A0A0A0MT08	1334 aa		11.4	□□□□□ -0.58
CAPN8-208	ENST00000482183	NHS	Q6T4R5	1651 aa		11.4	□□□□□ -0.58
CAPN8-208	ENST00000482183	BIN1	O00499	593 aa		11.4	□□□□□ -0.58
CAPN8-208	ENST00000482183	SLC26A4	O43511	780 aa		11.4	□□□□□ -0.58
CAPN8-208	ENST00000482183	GTPBP6	O43824	516 aa	Predicted RBP	11.4	□□□□□ -0.58
CAPN8-208	ENST00000482183	SLU7	O95391	586 aa	Known RBP	11.4	□□□□□ -0.58
CAPN8-208	ENST00000482183	TUBB	P07437	444 aa		11.4	□□□□□ -0.58
CAPN8-208	ENST00000482183	LMOD1	P29536	600 aa	Predicted RBP	11.4	□□□□□ -0.58
CAPN8-208	ENST00000482183	TOB1	P50616	345 aa	Predicted RBP	11.4	□□□□□ -0.58
CAPN8-208	ENST00000482183	FUT2	Q10981	343 aa		11.4	□□□□□ -0.58
CAPN8-208	ENST00000482183	PNOC	Q13519	176 aa		11.4	□□□□□ -0.58
CAPN8-208	ENST00000482183	CCDC144B	Q3MJ40	725 aa		11.4	□□□□□ -0.58
CAPN8-208	ENST00000482183	KRT25	Q7Z3Z0	450 aa		11.4	□□□□□ -0.58
CAPN8-208	ENST00000482183	HOMER1	Q86YM7	354 aa		11.4	□□□□□ -0.58
CAPN8-208	ENST00000482183	BLID	Q8IZY5	108 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms