RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 SEPT2Q15019 361 aa19.44■□□□□ 0.7
CCDC78-212ENST00000482152 VPS53Q5VIR6 699 aa19.44■□□□□ 0.7
CCDC78-212ENST00000482152 ZNF589Q86UQ0 364 aaPredicted RBP19.44■□□□□ 0.7
CCDC78-212ENST00000482152 C12orf42Q96LP6 360 aa19.44■□□□□ 0.7
CCDC78-212ENST00000482152 SH2D4AQ9H788 454 aa19.44■□□□□ 0.7
CCDC78-212ENST00000482152 RAD50Q92878 1312 aa19.44■□□□□ 0.7
CCDC78-212ENST00000482152 PCP11498 1178 aaKnown RBP19.43■□□□□ 0.7
CCDC78-212ENST00000482152 OSBPP22059 807 aa19.43■□□□□ 0.7
CCDC78-212ENST00000482152 HOXA7P31268 230 aaPredicted RBP19.43■□□□□ 0.7
CCDC78-212ENST00000482152 NT5C2P49902 561 aa19.43■□□□□ 0.7
CCDC78-212ENST00000482152 SP3Q02447 781 aa19.43■□□□□ 0.7
CCDC78-212ENST00000482152 SHROOM1Q2M3G4 852 aaPredicted RBP19.43■□□□□ 0.7
CCDC78-212ENST00000482152 PPP4R3BQ5MIZ7 849 aa19.43■□□□□ 0.7
CCDC78-212ENST00000482152 ERO1AQ96HE7 468 aa19.43■□□□□ 0.7
CCDC78-212ENST00000482152 FEZ1Q99689 392 aa19.43■□□□□ 0.7
CCDC78-212ENST00000482152 DSCC1Q9BVC3 393 aa19.43■□□□□ 0.7
CCDC78-212ENST00000482152 R3HDMLQ9H3Y0 253 aa19.43■□□□□ 0.7
CCDC78-212ENST00000482152 ARHGEF10LQ9HCE6 1279 aa19.43■□□□□ 0.7
CCDC78-212ENST00000482152 PHIPQ8WWQ0 1821 aa19.43■□□□□ 0.7
CCDC78-212ENST00000482152 BAZ2AQ9UIF9 1905 aaKnown RBP19.43■□□□□ 0.7
CCDC78-212ENST00000482152 ATAD5Q96QE3 1844 aa19.42■□□□□ 0.7
CCDC78-212ENST00000482152 AKR1B1P15121 316 aa19.42■□□□□ 0.7
CCDC78-212ENST00000482152 RASA1P20936 1047 aa19.42■□□□□ 0.7
CCDC78-212ENST00000482152 CHMLP26374 656 aa19.42■□□□□ 0.7
CCDC78-212ENST00000482152 PKN2Q16513 984 aaKnown RBP19.42■□□□□ 0.7
CCDC78-212ENST00000482152 BMP2KLQ5H9B9 411 aa19.42■□□□□ 0.7
CCDC78-212ENST00000482152 CTNNA3Q9UI47 895 aa19.42■□□□□ 0.7
CCDC78-212ENST00000482152 SMIM22K7EJ46 135 aa19.41■□□□□ 0.7
CCDC78-212ENST00000482152 C17orf99Q6UX52 265 aa19.41■□□□□ 0.7
CCDC78-212ENST00000482152 EMILIN3Q9NT22 766 aa19.41■□□□□ 0.7
CCDC78-212ENST00000482152 FGRP09769 529 aa19.4■□□□□ 0.7
CCDC78-212ENST00000482152 GCLCP48506 637 aaPredicted RBP19.4■□□□□ 0.7
CCDC78-212ENST00000482152 ICA1Q05084 483 aa19.4■□□□□ 0.7
CCDC78-212ENST00000482152 KIF22Q14807 665 aa19.4■□□□□ 0.7
CCDC78-212ENST00000482152 CTU1Q7Z7A3 348 aaKnown RBP19.4■□□□□ 0.7
CCDC78-212ENST00000482152 LPAR1Q92633 364 aa19.4■□□□□ 0.7
CCDC78-212ENST00000482152 SYNPO2Q9UMS6 1093 aa19.4■□□□□ 0.7
CCDC78-212ENST00000482152 TMX2Q9Y320 296 aa19.4■□□□□ 0.7
CCDC78-212ENST00000482152 ZNF213O14771 459 aa19.39■□□□□ 0.69
CCDC78-212ENST00000482152 TREML2Q5T2D2 321 aa19.39■□□□□ 0.69
CCDC78-212ENST00000482152 ACER1Q8TDN7 264 aa19.39■□□□□ 0.69
CCDC78-212ENST00000482152 SMCR8Q8TEV9 937 aaPredicted RBP19.39■□□□□ 0.69
CCDC78-212ENST00000482152 GTF3C2Q8WUA4 911 aaPredicted RBP19.39■□□□□ 0.69
CCDC78-212ENST00000482152 RNF41Q9H4P4 317 aaPredicted RBP19.39■□□□□ 0.69
CCDC78-212ENST00000482152 NYAP2Q9P242 653 aa19.39■□□□□ 0.69
CCDC78-212ENST00000482152 USP17L15C9J2P7 530 aa19.38■□□□□ 0.69
CCDC78-212ENST00000482152 USP17L13C9JLJ4 530 aa19.38■□□□□ 0.69
CCDC78-212ENST00000482152 USP17L11C9JVI0 530 aa19.38■□□□□ 0.69
CCDC78-212ENST00000482152 USP17L18D6R9N7 530 aa19.38■□□□□ 0.69
CCDC78-212ENST00000482152 USP17L22D6RA61 530 aa19.38■□□□□ 0.69
CCDC78-212ENST00000482152 USP17L17D6RBQ6 530 aa19.38■□□□□ 0.69
CCDC78-212ENST00000482152 USP17L19D6RCP7 530 aa19.38■□□□□ 0.69
CCDC78-212ENST00000482152 USP17L20D6RJB6 530 aa19.38■□□□□ 0.69
CCDC78-212ENST00000482152 ORC4O43929 436 aa19.38■□□□□ 0.69
CCDC78-212ENST00000482152 GNRH1P01148 92 aa19.38■□□□□ 0.69
CCDC78-212ENST00000482152 TSPY3P0CV98 308 aa19.38■□□□□ 0.69
CCDC78-212ENST00000482152 TSPY8P0CW00 308 aa19.38■□□□□ 0.69
CCDC78-212ENST00000482152 IRX3P78415 501 aaPredicted RBP19.38■□□□□ 0.69
CCDC78-212ENST00000482152 USP17L24Q0WX57 530 aa19.38■□□□□ 0.69
CCDC78-212ENST00000482152 SIAH1Q8IUQ4 282 aa19.38■□□□□ 0.69
CCDC78-212ENST00000482152 TNS4Q8IZW8 715 aa19.38■□□□□ 0.69
CCDC78-212ENST00000482152 NEDD1Q8NHV4 660 aa19.38■□□□□ 0.69
CCDC78-212ENST00000482152 ADGRA2Q96PE1 1338 aa19.38■□□□□ 0.69
CCDC78-212ENST00000482152 ASCC2Q9H1I8 757 aaPredicted RBP19.38■□□□□ 0.69
CCDC78-212ENST00000482152 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.38■□□□□ 0.69
CCDC78-212ENST00000482152 A0A1W2PRG0 241 aa19.37■□□□□ 0.69
CCDC78-212ENST00000482152 CYP2C8P10632 490 aa19.37■□□□□ 0.69
CCDC78-212ENST00000482152 EEF2P13639 858 aaKnown RBP19.37■□□□□ 0.69
CCDC78-212ENST00000482152 STK11IPQ8N1F8 1099 aa19.37■□□□□ 0.69
CCDC78-212ENST00000482152 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.37■□□□□ 0.69
CCDC78-212ENST00000482152 PLIN4Q96Q06 1357 aa19.36■□□□□ 0.69
CCDC78-212ENST00000482152 PTPRFP10586 1907 aa19.36■□□□□ 0.69
CCDC78-212ENST00000482152 IGKV6D-41A0A0C4DH26 115 aa19.36■□□□□ 0.69
CCDC78-212ENST00000482152 SGSM2O43147 1006 aa19.36■□□□□ 0.69
CCDC78-212ENST00000482152 PRDM1O75626 825 aa19.36■□□□□ 0.69
CCDC78-212ENST00000482152 BCRP11274 1271 aa19.36■□□□□ 0.69
CCDC78-212ENST00000482152 TFAP4Q01664 338 aa19.36■□□□□ 0.69
CCDC78-212ENST00000482152 CTDSPL2Q05D32 466 aa19.36■□□□□ 0.69
CCDC78-212ENST00000482152 IMMTQ16891 758 aaKnown RBP19.36■□□□□ 0.69
CCDC78-212ENST00000482152 CATSPERGQ6ZRH7 1159 aa19.36■□□□□ 0.69
CCDC78-212ENST00000482152 MKL1Q969V6 931 aa19.36■□□□□ 0.69
CCDC78-212ENST00000482152 VCPKMTQ9H867 229 aa19.36■□□□□ 0.69
CCDC78-212ENST00000482152 GOPCQ9HD26 462 aa19.36■□□□□ 0.69
CCDC78-212ENST00000482152 CPA4Q9UI42 421 aa19.36■□□□□ 0.69
CCDC78-212ENST00000482152 LOC285556D6RIA3 1793 aa19.36■□□□□ 0.69
CCDC78-212ENST00000482152 TSPY2A6NKD2 308 aa19.35■□□□□ 0.69
CCDC78-212ENST00000482152 TTLL1O95922 423 aa19.35■□□□□ 0.69
CCDC78-212ENST00000482152 VCAM1P19320 739 aa19.35■□□□□ 0.69
CCDC78-212ENST00000482152 LACTBP83111 547 aaPredicted RBP19.35■□□□□ 0.69
CCDC78-212ENST00000482152 DGKZQ13574 1117 aa19.35■□□□□ 0.69
CCDC78-212ENST00000482152 ZYXQ15942 572 aaKnown RBP19.35■□□□□ 0.69
CCDC78-212ENST00000482152 AKNAD1Q5T1N1 836 aa19.35■□□□□ 0.69
CCDC78-212ENST00000482152 CASC1Q6TDU7 716 aa19.35■□□□□ 0.69
CCDC78-212ENST00000482152 MFSD6Q6ZSS7 791 aa19.35■□□□□ 0.69
CCDC78-212ENST00000482152 STAG1Q8WVM7 1258 aa19.35■□□□□ 0.69
CCDC78-212ENST00000482152 MTMR4Q9NYA4 1195 aa19.35■□□□□ 0.69
CCDC78-212ENST00000482152 HOXC10Q9NYD6 342 aa19.35■□□□□ 0.69
CCDC78-212ENST00000482152 HOXD10P28358 340 aa19.34■□□□□ 0.69
CCDC78-212ENST00000482152 FAM110CQ1W6H9 321 aa19.34■□□□□ 0.69
CCDC78-212ENST00000482152 KIAA1211Q6ZU35 1233 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms