RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 ERVK-24P63145 666 aa3.98□□□□□ -1.77
USH2A-204ENST00000481786 TIGD5Q53EQ6 642 aa3.98□□□□□ -1.77
USH2A-204ENST00000481786 MAP1SQ66K74 1059 aaPredicted RBP3.98□□□□□ -1.77
USH2A-204ENST00000481786 NXPE4Q6UWF7 544 aa3.98□□□□□ -1.77
USH2A-204ENST00000481786 DTHD1Q6ZMT9 781 aa3.98□□□□□ -1.77
USH2A-204ENST00000481786 ZNF605Q86T29 641 aa3.98□□□□□ -1.77
USH2A-204ENST00000481786 C12orf40Q86WS4 652 aa3.98□□□□□ -1.77
USH2A-204ENST00000481786 GPBAR1Q8TDU6 330 aa3.98□□□□□ -1.77
USH2A-204ENST00000481786 OSBPL7Q9BZF2 842 aa3.98□□□□□ -1.77
USH2A-204ENST00000481786 ADAMTS10Q9H324 1103 aa3.98□□□□□ -1.77
USH2A-204ENST00000481786 PPP4R2Q9NY27 417 aa3.98□□□□□ -1.77
USH2A-204ENST00000481786 KCTD3Q9Y597 815 aa3.98□□□□□ -1.77
USH2A-204ENST00000481786 ZNF608Q9ULD9 1512 aaPredicted RBP3.98□□□□□ -1.77
USH2A-204ENST00000481786 SMARCA4P51532 1647 aa3.98□□□□□ -1.77
USH2A-204ENST00000481786 IFT140Q96RY7 1462 aa3.98□□□□□ -1.77
USH2A-204ENST00000481786 DCDC2CA8MYV0 355 aa3.97□□□□□ -1.77
USH2A-204ENST00000481786 HPXP02790 462 aa3.97□□□□□ -1.77
USH2A-204ENST00000481786 ESR1P03372 595 aa3.97□□□□□ -1.77
USH2A-204ENST00000481786 XRCC5P13010 732 aaKnown RBP3.97□□□□□ -1.77
USH2A-204ENST00000481786 INSRRP14616 1297 aa3.97□□□□□ -1.77
USH2A-204ENST00000481786 VMACQ2NL98 169 aa3.97□□□□□ -1.77
USH2A-204ENST00000481786 ZXDCQ2QGD7 858 aaPredicted RBP3.97□□□□□ -1.77
USH2A-204ENST00000481786 TCERG1LQ5VWI1 586 aa3.97□□□□□ -1.77
USH2A-204ENST00000481786 ALG1LQ6GMV1 187 aa3.97□□□□□ -1.77
USH2A-204ENST00000481786 SYT8Q8NBV8 401 aa3.97□□□□□ -1.77
USH2A-204ENST00000481786 C3orf58Q8NDZ4 430 aa3.97□□□□□ -1.77
USH2A-204ENST00000481786 RIN3Q8TB24 985 aa3.97□□□□□ -1.77
USH2A-204ENST00000481786 ADAM7Q9H2U9 754 aa3.97□□□□□ -1.77
USH2A-204ENST00000481786 ZSWIM5Q9P217 1185 aa3.97□□□□□ -1.77
USH2A-204ENST00000481786 HECW2Q9P2P5 1572 aa3.97□□□□□ -1.77
USH2A-204ENST00000481786 URB2Q14146 1524 aaKnown RBP3.96□□□□□ -1.78
USH2A-204ENST00000481786 ANKRD33BA6NCL7 494 aa3.96□□□□□ -1.78
USH2A-204ENST00000481786 GIPC1O14908 333 aa3.96□□□□□ -1.78
USH2A-204ENST00000481786 LDHBP07195 334 aaKnown RBP3.96□□□□□ -1.78
USH2A-204ENST00000481786 RAC2P15153 192 aa3.96□□□□□ -1.78
USH2A-204ENST00000481786 GALK1P51570 392 aa3.96□□□□□ -1.78
USH2A-204ENST00000481786 PUM1Q14671 1186 aaKnown RBP eCLIP3.96□□□□□ -1.78
USH2A-204ENST00000481786 DNAJC14Q6Y2X3 702 aaPredicted RBP3.96□□□□□ -1.78
USH2A-204ENST00000481786 ARMCX6Q7L4S7 300 aa3.96□□□□□ -1.78
USH2A-204ENST00000481786 MFSD4AQ8N468 514 aa3.96□□□□□ -1.78
USH2A-204ENST00000481786 SRCIN1Q9C0H9 1055 aa3.96□□□□□ -1.78
USH2A-204ENST00000481786 TMEM39AQ9NV64 488 aa3.96□□□□□ -1.78
USH2A-204ENST00000481786 MAPK8IP1Q9UQF2 711 aa3.96□□□□□ -1.78
USH2A-204ENST00000481786 AKAP2Q9Y2D5 859 aa3.96□□□□□ -1.78
USH2A-204ENST00000481786 CAPN6Q9Y6Q1 641 aa3.96□□□□□ -1.78
USH2A-204ENST00000481786 DISP3Q9P2K9 1392 aa3.96□□□□□ -1.78
USH2A-204ENST00000481786 CBX7O95931 251 aa3.95□□□□□ -1.78
USH2A-204ENST00000481786 ATP2B2Q01814 1243 aa3.95□□□□□ -1.78
USH2A-204ENST00000481786 SULF2Q8IWU5 870 aa3.95□□□□□ -1.78
USH2A-204ENST00000481786 GPN3Q9UHW5 284 aaPredicted RBP3.95□□□□□ -1.78
USH2A-204ENST00000481786 TMEM59LQ9UK28 342 aa3.95□□□□□ -1.78
USH2A-204ENST00000481786 TPX2Q9ULW0 747 aaKnown RBP3.95□□□□□ -1.78
USH2A-204ENST00000481786 SYNJ2O15056 1496 aa3.94□□□□□ -1.78
USH2A-204ENST00000481786 GAPVD1Q14C86 1478 aa3.94□□□□□ -1.78
USH2A-204ENST00000481786 SUV39H1O43463 412 aa3.94□□□□□ -1.78
USH2A-204ENST00000481786 AKAP8O43823 692 aaKnown RBP3.94□□□□□ -1.78
USH2A-204ENST00000481786 PI3P19957 117 aa3.94□□□□□ -1.78
USH2A-204ENST00000481786 GSTT1P30711 240 aa3.94□□□□□ -1.78
USH2A-204ENST00000481786 PPP2R3AQ06190 1150 aa3.94□□□□□ -1.78
USH2A-204ENST00000481786 RING1Q06587 406 aa3.94□□□□□ -1.78
USH2A-204ENST00000481786 ZNF252P-AS1Q0IIN9 211 aa3.94□□□□□ -1.78
USH2A-204ENST00000481786 SFRP5Q5T4F7 317 aa3.94□□□□□ -1.78
USH2A-204ENST00000481786 ZBTB37Q5TC79 503 aa3.94□□□□□ -1.78
USH2A-204ENST00000481786 GRIN3AQ8TCU5 1115 aa3.94□□□□□ -1.78
USH2A-204ENST00000481786 ANKRD24Q8TF21 1146 aa3.94□□□□□ -1.78
USH2A-204ENST00000481786 NECAB3Q96P71 396 aaPredicted RBP3.94□□□□□ -1.78
USH2A-204ENST00000481786 GZF1Q9H116 711 aaPredicted RBP3.94□□□□□ -1.78
USH2A-204ENST00000481786 C12orf49Q9H741 205 aa3.94□□□□□ -1.78
USH2A-204ENST00000481786 RNF19AQ9NV58 838 aa3.94□□□□□ -1.78
USH2A-204ENST00000481786 PPM1HQ9ULR3 514 aa3.94□□□□□ -1.78
USH2A-204ENST00000481786 SPG7Q9UQ90 795 aa3.94□□□□□ -1.78
USH2A-204ENST00000481786 PRPF40AO75400 957 aaKnown RBP3.93□□□□□ -1.78
USH2A-204ENST00000481786 ARNTP27540 789 aa3.93□□□□□ -1.78
USH2A-204ENST00000481786 GNA15P30679 374 aa3.93□□□□□ -1.78
USH2A-204ENST00000481786 ZNF385BQ569K4 471 aa3.93□□□□□ -1.78
USH2A-204ENST00000481786 EAPPQ56P03 285 aaPredicted RBP3.93□□□□□ -1.78
USH2A-204ENST00000481786 TMEM132EQ6IEE7 984 aa3.93□□□□□ -1.78
USH2A-204ENST00000481786 TPTE2Q6XPS3 522 aa3.93□□□□□ -1.78
USH2A-204ENST00000481786 FRMD6Q96NE9 622 aa3.93□□□□□ -1.78
USH2A-204ENST00000481786 MIPEPQ99797 713 aa3.93□□□□□ -1.78
USH2A-204ENST00000481786 FBRSQ9HAH7 460 aa3.93□□□□□ -1.78
USH2A-204ENST00000481786 EPB41L4AQ9HCS5 686 aaPredicted RBP3.93□□□□□ -1.78
USH2A-204ENST00000481786 FAM8A1Q9UBU6 413 aa3.93□□□□□ -1.78
USH2A-204ENST00000481786 CLASP1Q7Z460 1538 aa3.93□□□□□ -1.78
USH2A-204ENST00000481786 CFTRP13569 1480 aa3.92□□□□□ -1.78
USH2A-204ENST00000481786 TEX51A0A1B0GUA7 166 aa3.92□□□□□ -1.78
USH2A-204ENST00000481786 ENC1O14682 589 aa3.92□□□□□ -1.78
USH2A-204ENST00000481786 PAGE1O75459 146 aa3.92□□□□□ -1.78
USH2A-204ENST00000481786 SASH1O94885 1247 aa3.92□□□□□ -1.78
USH2A-204ENST00000481786 USP17L7P0C7H9 530 aa3.92□□□□□ -1.78
USH2A-204ENST00000481786 BMP6P22004 513 aa3.92□□□□□ -1.78
USH2A-204ENST00000481786 NME2P22392 152 aa3.92□□□□□ -1.78
USH2A-204ENST00000481786 TNK2Q07912 1038 aa3.92□□□□□ -1.78
USH2A-204ENST00000481786 NKG7Q16617 165 aa3.92□□□□□ -1.78
USH2A-204ENST00000481786 FBXO33Q7Z6M2 555 aa3.92□□□□□ -1.78
USH2A-204ENST00000481786 ACSBG1Q96GR2 724 aa3.92□□□□□ -1.78
USH2A-204ENST00000481786 CCDC120Q96HB5 630 aa3.92□□□□□ -1.78
USH2A-204ENST00000481786 DUSP9Q99956 384 aaKnown RBP3.92□□□□□ -1.78
USH2A-204ENST00000481786 CEP44Q9C0F1 390 aa3.92□□□□□ -1.78
USH2A-204ENST00000481786 PICK1Q9NRD5 415 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms