RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 RASIP1Q5U651 963 aa4.29□□□□□ -1.72
SMC6-208ENST00000481708 NGLY1Q96IV0 654 aa4.29□□□□□ -1.72
SMC6-208ENST00000481708 CLUHP3Q96NS8 147 aa4.29□□□□□ -1.72
SMC6-208ENST00000481708 SENP7Q9BQF6 1050 aa4.29□□□□□ -1.72
SMC6-208ENST00000481708 BCO2Q9BYV7 579 aa4.29□□□□□ -1.72
SMC6-208ENST00000481708 CHRDQ9H2X0 955 aa4.29□□□□□ -1.72
SMC6-208ENST00000481708 ANKIB1Q9P2G1 1089 aa4.29□□□□□ -1.72
SMC6-208ENST00000481708 PIP5K1CO60331 668 aa4.29□□□□□ -1.72
SMC6-208ENST00000481708 CDC27P30260 824 aa4.29□□□□□ -1.72
SMC6-208ENST00000481708 HIRAP54198 1017 aaPredicted RBP4.29□□□□□ -1.72
SMC6-208ENST00000481708 INO80DQ53TQ3 878 aaPredicted RBP4.29□□□□□ -1.72
SMC6-208ENST00000481708 FOXB2Q5VYV0 432 aa4.29□□□□□ -1.72
SMC6-208ENST00000481708 LRP10Q7Z4F1 713 aa4.29□□□□□ -1.72
SMC6-208ENST00000481708 SVIPQ8NHG7 77 aa4.29□□□□□ -1.72
SMC6-208ENST00000481708 L3MBTL2Q969R5 705 aa4.29□□□□□ -1.72
SMC6-208ENST00000481708 KIFC2Q96AC6 838 aa4.29□□□□□ -1.72
SMC6-208ENST00000481708 CASS4Q9NQ75 786 aa4.29□□□□□ -1.72
SMC6-208ENST00000481708 FAM8A1Q9UBU6 413 aa4.29□□□□□ -1.72
SMC6-208ENST00000481708 HCN4Q9Y3Q4 1203 aa4.29□□□□□ -1.72
SMC6-208ENST00000481708 COMMD10Q9Y6G5 202 aa4.29□□□□□ -1.72
SMC6-208ENST00000481708 CCER2I3L3R5 266 aa4.29□□□□□ -1.72
SMC6-208ENST00000481708 MEN1O00255 615 aa4.29□□□□□ -1.72
SMC6-208ENST00000481708 GJB6O95452 261 aa4.29□□□□□ -1.72
SMC6-208ENST00000481708 RASGRF1Q13972 1273 aa4.29□□□□□ -1.72
SMC6-208ENST00000481708 GRM2Q14416 872 aa4.29□□□□□ -1.72
SMC6-208ENST00000481708 GRIN2CQ14957 1233 aa4.29□□□□□ -1.72
SMC6-208ENST00000481708 HPS1Q92902 700 aa4.29□□□□□ -1.72
SMC6-208ENST00000481708 LATS2Q9NRM7 1088 aa4.29□□□□□ -1.72
SMC6-208ENST00000481708 PLA2G2EQ9NZK7 142 aa4.29□□□□□ -1.72
SMC6-208ENST00000481708 TMEM63CQ9P1W3 806 aa4.29□□□□□ -1.72
SMC6-208ENST00000481708 TRIM37O94972 964 aa4.28□□□□□ -1.72
SMC6-208ENST00000481708 SKAP1Q86WV1 359 aa4.28□□□□□ -1.72
SMC6-208ENST00000481708 ALDH16A1Q8IZ83 802 aa4.28□□□□□ -1.72
SMC6-208ENST00000481708 GEMIN8Q9NWZ8 242 aaKnown RBP4.28□□□□□ -1.72
SMC6-208ENST00000481708 UPK3BL1B0FP48 263 aa4.28□□□□□ -1.72
SMC6-208ENST00000481708 UPK3BL2E5RIL1 263 aa4.28□□□□□ -1.72
SMC6-208ENST00000481708 ADCY3O60266 1144 aa4.28□□□□□ -1.72
SMC6-208ENST00000481708 RBM6P78332 1123 aaKnown RBP4.28□□□□□ -1.72
SMC6-208ENST00000481708 TEAD4Q15561 434 aa4.28□□□□□ -1.72
SMC6-208ENST00000481708 ALKBH2Q6NS38 261 aa4.28□□□□□ -1.72
SMC6-208ENST00000481708 PPARGC1BQ86YN6 1023 aaKnown RBP4.28□□□□□ -1.72
SMC6-208ENST00000481708 MEIOBQ8N635 442 aa4.28□□□□□ -1.72
SMC6-208ENST00000481708 TMX1Q9H3N1 280 aa4.28□□□□□ -1.72
SMC6-208ENST00000481708 TAF1P21675 1872 aa4.28□□□□□ -1.72
SMC6-208ENST00000481708 SERTM1A2A2V5 107 aa4.28□□□□□ -1.72
SMC6-208ENST00000481708 PRSS47A8MTI9 375 aa4.28□□□□□ -1.72
SMC6-208ENST00000481708 C11orf95C9JLR9 678 aaPredicted RBP4.28□□□□□ -1.72
SMC6-208ENST00000481708 CPNE3O75131 537 aaKnown RBP4.28□□□□□ -1.72
SMC6-208ENST00000481708 C8orf34Q49A92 452 aa4.28□□□□□ -1.72
SMC6-208ENST00000481708 MYO1HQ8N1T3 1032 aa4.28□□□□□ -1.72
SMC6-208ENST00000481708 NOB1Q9ULX3 412 aaKnown RBP4.28□□□□□ -1.72
SMC6-208ENST00000481708 KIF24Q5T7B8 1368 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 EXOC5O00471 708 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 PDE8AO60658 829 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 TXLNAP40222 546 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 EPHB1P54762 984 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 FAM83BQ5T0W9 1011 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 SAMD3Q8N6K7 520 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 TMEM74Q96NL1 305 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 CDH19Q9H159 772 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 PPCSQ9HAB8 311 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 SPATA31A5Q5VU36 1347 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 SPATA31A7Q8IWB4 1347 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 FRMPD3Q5JV73 1810 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 GSG1L2A8MUP6 293 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 ZNF500O60304 480 aaPredicted RBP4.27□□□□□ -1.73
SMC6-208ENST00000481708 PEAR1Q5VY43 1037 aaPredicted RBP4.27□□□□□ -1.73
SMC6-208ENST00000481708 RUFY4Q6ZNE9 571 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 PHC3Q8NDX5 983 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 RELTQ969Z4 430 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 CAMKK2Q96RR4 588 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 NT5C1AQ9BXI3 368 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 RHOBTB2Q9BYZ6 727 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 CABP1Q9NZU7 370 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 KDM2BQ8NHM5 1336 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 TTC24A2A3L6 582 aaPredicted RBP4.27□□□□□ -1.73
SMC6-208ENST00000481708 MAP3K11Q16584 847 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 TMEM95Q3KNT9 176 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 INSM2Q96T92 566 aaPredicted RBP4.27□□□□□ -1.73
SMC6-208ENST00000481708 RSRP1Q9BUV0 290 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 DNAJC25Q9H1X3 360 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 KCNG1Q9UIX4 513 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 ZMYM5Q9UJ78 669 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 ZNF232Q9UNY5 417 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 COL3A1P02461 1466 aaPredicted RBP4.27□□□□□ -1.73
SMC6-208ENST00000481708 LOC285556D6RIA3 1793 aa4.27□□□□□ -1.73
SMC6-208ENST00000481708 MYCLP1P12525 358 aaPredicted RBP4.26□□□□□ -1.73
SMC6-208ENST00000481708 ACBD5Q5T8D3 534 aaPredicted RBP4.26□□□□□ -1.73
SMC6-208ENST00000481708 TREML1Q86YW5 311 aa4.26□□□□□ -1.73
SMC6-208ENST00000481708 SPICE1Q8N0Z3 855 aa4.26□□□□□ -1.73
SMC6-208ENST00000481708 NOC4LQ9BVI4 516 aaKnown RBP4.26□□□□□ -1.73
SMC6-208ENST00000481708 PHACTR1Q9C0D0 580 aa4.26□□□□□ -1.73
SMC6-208ENST00000481708 GRIP2Q9C0E4 1043 aa4.26□□□□□ -1.73
SMC6-208ENST00000481708 MRPS23Q9Y3D9 190 aaKnown RBP4.26□□□□□ -1.73
SMC6-208ENST00000481708 UBAP1LF5GYI3 381 aa4.26□□□□□ -1.73
SMC6-208ENST00000481708 CELA3AP09093 270 aa4.26□□□□□ -1.73
SMC6-208ENST00000481708 GIPRP48546 466 aa4.26□□□□□ -1.73
SMC6-208ENST00000481708 TRAPPC10P48553 1259 aa4.26□□□□□ -1.73
SMC6-208ENST00000481708 TUBB8Q3ZCM7 444 aa4.26□□□□□ -1.73
SMC6-208ENST00000481708 AMOTL1Q8IY63 956 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms