RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 SEPT2Q15019 361 aa26.77■■□□□ 1.88
GPCPD1-206ENST00000481690 UBE3CQ15386 1083 aa26.77■■□□□ 1.88
GPCPD1-206ENST00000481690 SLC44A5Q8NCS7 719 aa26.77■■□□□ 1.88
GPCPD1-206ENST00000481690 GTF3C2Q8WUA4 911 aaPredicted RBP26.77■■□□□ 1.88
GPCPD1-206ENST00000481690 KIAA1683Q9H0B3 1180 aa26.77■■□□□ 1.88
GPCPD1-206ENST00000481690 ATP8A2Q9NTI2 1148 aa26.77■■□□□ 1.88
GPCPD1-206ENST00000481690 MKI67P46013 3256 aaKnown RBP26.77■■□□□ 1.88
GPCPD1-206ENST00000481690 GUCY1A2P33402 732 aa26.76■■□□□ 1.87
GPCPD1-206ENST00000481690 TSHZ3Q63HK5 1081 aa26.76■■□□□ 1.87
GPCPD1-206ENST00000481690 CCAR1Q8IX12 1150 aaKnown RBP26.76■■□□□ 1.87
GPCPD1-206ENST00000481690 DYNLL2Q96FJ2 89 aa26.76■■□□□ 1.87
GPCPD1-206ENST00000481690 DDRGK1Q96HY6 314 aa26.76■■□□□ 1.87
GPCPD1-206ENST00000481690 USP17L15C9J2P7 530 aa26.75■■□□□ 1.87
GPCPD1-206ENST00000481690 USP17L13C9JLJ4 530 aa26.75■■□□□ 1.87
GPCPD1-206ENST00000481690 USP17L11C9JVI0 530 aa26.75■■□□□ 1.87
GPCPD1-206ENST00000481690 USP17L18D6R9N7 530 aa26.75■■□□□ 1.87
GPCPD1-206ENST00000481690 USP17L22D6RA61 530 aa26.75■■□□□ 1.87
GPCPD1-206ENST00000481690 USP17L17D6RBQ6 530 aa26.75■■□□□ 1.87
GPCPD1-206ENST00000481690 USP17L19D6RCP7 530 aa26.75■■□□□ 1.87
GPCPD1-206ENST00000481690 USP17L20D6RJB6 530 aa26.75■■□□□ 1.87
GPCPD1-206ENST00000481690 VCAM1P19320 739 aa26.75■■□□□ 1.87
GPCPD1-206ENST00000481690 USP17L24Q0WX57 530 aa26.75■■□□□ 1.87
GPCPD1-206ENST00000481690 AMOTL1Q8IY63 956 aa26.75■■□□□ 1.87
GPCPD1-206ENST00000481690 U2AF1L4Q8WU68 220 aaKnown RBP26.75■■□□□ 1.87
GPCPD1-206ENST00000481690 RBPJLQ9UBG7 517 aa26.75■■□□□ 1.87
GPCPD1-206ENST00000481690 SWAP70Q9UH65 585 aa26.75■■□□□ 1.87
GPCPD1-206ENST00000481690 SLC4A4Q9Y6R1 1079 aa26.75■■□□□ 1.87
GPCPD1-206ENST00000481690 SLC34A2O95436 690 aa26.74■■□□□ 1.87
GPCPD1-206ENST00000481690 RRP1P56182 461 aaKnown RBP26.74■■□□□ 1.87
GPCPD1-206ENST00000481690 ERVK-9P63128 1117 aa26.74■■□□□ 1.87
GPCPD1-206ENST00000481690 ERVK-24P63145 666 aa26.74■■□□□ 1.87
GPCPD1-206ENST00000481690 GJD2Q9UKL4 321 aa26.74■■□□□ 1.87
GPCPD1-206ENST00000481690 CYP2D7A0A087X1C5 515 aa26.73■■□□□ 1.87
GPCPD1-206ENST00000481690 Q3C1V9 767 aa26.73■■□□□ 1.87
GPCPD1-206ENST00000481690 PUS7LQ9H0K6 701 aaKnown RBP26.73■■□□□ 1.87
GPCPD1-206ENST00000481690 PCDHB15Q9Y5E8 787 aa26.73■■□□□ 1.87
GPCPD1-206ENST00000481690 SGPL1O95470 568 aa26.72■■□□□ 1.87
GPCPD1-206ENST00000481690 HMGCRP04035 888 aa26.72■■□□□ 1.87
GPCPD1-206ENST00000481690 CYP2B6P20813 491 aa26.72■■□□□ 1.87
GPCPD1-206ENST00000481690 MAPK4P31152 587 aa26.72■■□□□ 1.87
GPCPD1-206ENST00000481690 CATSPERGQ6ZRH7 1159 aa26.72■■□□□ 1.87
GPCPD1-206ENST00000481690 TMEM179Q6ZVK1 233 aa26.72■■□□□ 1.87
GPCPD1-206ENST00000481690 DEFB118Q96PH6 123 aa26.72■■□□□ 1.87
GPCPD1-206ENST00000481690 RPAP3Q9H6T3 665 aaPredicted RBP26.72■■□□□ 1.87
GPCPD1-206ENST00000481690 CWC22Q9HCG8 908 aaKnown RBP26.72■■□□□ 1.87
GPCPD1-206ENST00000481690 USP17L12C9JPN9 530 aa26.71■■□□□ 1.87
GPCPD1-206ENST00000481690 USP17L21D6R901 530 aa26.71■■□□□ 1.87
GPCPD1-206ENST00000481690 SOCS4Q8WXH5 440 aa26.71■■□□□ 1.87
GPCPD1-206ENST00000481690 GCC1Q96CN9 775 aa26.71■■□□□ 1.87
GPCPD1-206ENST00000481690 YTHDC1Q96MU7 727 aaKnown RBP26.71■■□□□ 1.87
GPCPD1-206ENST00000481690 NUDT12Q9BQG2 462 aa26.71■■□□□ 1.87
GPCPD1-206ENST00000481690 PORCNQ9H237 461 aa26.71■■□□□ 1.87
GPCPD1-206ENST00000481690 A0A1W2PRG0 241 aa26.7■■□□□ 1.86
GPCPD1-206ENST00000481690 SMIM22K7EJ46 135 aa26.7■■□□□ 1.86
GPCPD1-206ENST00000481690 FARP2O94887 1054 aaPredicted RBP26.7■■□□□ 1.86
GPCPD1-206ENST00000481690 TFRCP02786 760 aaKnown RBP26.7■■□□□ 1.86
GPCPD1-206ENST00000481690 AKR1B1P15121 316 aa26.7■■□□□ 1.86
GPCPD1-206ENST00000481690 C12orf60Q5U649 245 aa26.7■■□□□ 1.86
GPCPD1-206ENST00000481690 POTEEQ6S8J3 1075 aa26.7■■□□□ 1.86
GPCPD1-206ENST00000481690 KBTBD3Q8NAB2 608 aa26.7■■□□□ 1.86
GPCPD1-206ENST00000481690 RABGAP1Q9Y3P9 1069 aa26.7■■□□□ 1.86
GPCPD1-206ENST00000481690 GPR142Q7Z601 462 aa26.69■■□□□ 1.86
GPCPD1-206ENST00000481690 CLEC10AQ8IUN9 316 aa26.69■■□□□ 1.86
GPCPD1-206ENST00000481690 TRIB2Q92519 343 aa26.69■■□□□ 1.86
GPCPD1-206ENST00000481690 DPF3Q92784 378 aa26.69■■□□□ 1.86
GPCPD1-206ENST00000481690 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.69■■□□□ 1.861e-8■■■■■ 34.4
GPCPD1-206ENST00000481690 PAK6Q9NQU5 681 aaPredicted RBP26.69■■□□□ 1.86
GPCPD1-206ENST00000481690 CNMDO75829 334 aa26.68■■□□□ 1.86
GPCPD1-206ENST00000481690 CDK8P49336 464 aa26.68■■□□□ 1.86
GPCPD1-206ENST00000481690 TRIM32Q13049 653 aa26.68■■□□□ 1.86
GPCPD1-206ENST00000481690 WDR78Q5VTH9 848 aa26.68■■□□□ 1.86
GPCPD1-206ENST00000481690 PLEKHH3Q7Z736 793 aa26.68■■□□□ 1.86
GPCPD1-206ENST00000481690 PIAS4Q8N2W9 510 aaPredicted RBP26.68■■□□□ 1.86
GPCPD1-206ENST00000481690 CCNA1P78396 465 aa26.67■■□□□ 1.86
GPCPD1-206ENST00000481690 ICA1Q05084 483 aa26.67■■□□□ 1.86
GPCPD1-206ENST00000481690 CTR9Q6PD62 1173 aa26.67■■□□□ 1.86
GPCPD1-206ENST00000481690 C16orf86Q6ZW13 317 aa26.67■■□□□ 1.86
GPCPD1-206ENST00000481690 TANGO6Q9C0B7 1094 aa26.67■■□□□ 1.86
GPCPD1-206ENST00000481690 ARHGEF10LQ9HCE6 1279 aa26.67■■□□□ 1.86
GPCPD1-206ENST00000481690 SPDYE16A6NNV3 312 aaPredicted RBP26.66■■□□□ 1.86
GPCPD1-206ENST00000481690 UBE2Q1Q7Z7E8 422 aa26.66■■□□□ 1.86
GPCPD1-206ENST00000481690 APPBP2Q92624 585 aa26.66■■□□□ 1.86
GPCPD1-206ENST00000481690 CCDC17Q96LX7 622 aa26.66■■□□□ 1.86
GPCPD1-206ENST00000481690 STRBPQ96SI9 672 aaKnown RBP26.66■■□□□ 1.86
GPCPD1-206ENST00000481690 CRBNQ96SW2 442 aa26.66■■□□□ 1.86
GPCPD1-206ENST00000481690 HTATIP2Q9BUP3 242 aa26.66■■□□□ 1.86
GPCPD1-206ENST00000481690 ARPP21Q9UBL0 812 aaPredicted RBP26.66■■□□□ 1.86
GPCPD1-206ENST00000481690 RNF113AO15541 343 aaKnown RBP26.65■■□□□ 1.86
GPCPD1-206ENST00000481690 ZKSCAN1P17029 563 aaPredicted RBP26.65■■□□□ 1.86
GPCPD1-206ENST00000481690 RGS2P41220 211 aa26.65■■□□□ 1.86
GPCPD1-206ENST00000481690 OSBP2Q969R2 916 aa26.65■■□□□ 1.86
GPCPD1-206ENST00000481690 HMX1Q9NP08 348 aaPredicted RBP26.65■■□□□ 1.86
GPCPD1-206ENST00000481690 BTBD7Q9P203 1132 aa26.65■■□□□ 1.86
GPCPD1-206ENST00000481690 RLFQ13129 1914 aa26.65■■□□□ 1.86
GPCPD1-206ENST00000481690 TTC41PQ6P2S7 1318 aa26.65■■□□□ 1.86
GPCPD1-206ENST00000481690 RPTORQ8N122 1335 aa26.65■■□□□ 1.86
GPCPD1-206ENST00000481690 LBX2Q6XYB7 198 aa26.64■■□□□ 1.86
GPCPD1-206ENST00000481690 OTUD7AQ8TE49 926 aaPredicted RBP26.64■■□□□ 1.86
GPCPD1-206ENST00000481690 SH2D4AQ9H788 454 aa26.64■■□□□ 1.86
GPCPD1-206ENST00000481690 PARP14Q460N5 1801 aa26.64■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms