RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 ZBTB21Q9ULJ3 1066 aa12.67□□□□□ -0.38
SSBP1-210ENST00000481508 AFG3L2Q9Y4W6 797 aa12.67□□□□□ -0.38
SSBP1-210ENST00000481508 ROBO3Q96MS0 1386 aa12.67□□□□□ -0.38
SSBP1-210ENST00000481508 CCDC171Q6TFL3 1326 aa12.66□□□□□ -0.38
SSBP1-210ENST00000481508 TESPA1A2RU30 521 aaPredicted RBP12.66□□□□□ -0.38
SSBP1-210ENST00000481508 MANSC4A6NHS7 340 aaPredicted RBP12.66□□□□□ -0.38
SSBP1-210ENST00000481508 GH2P01242 217 aa12.66□□□□□ -0.38
SSBP1-210ENST00000481508 GNAT2P19087 354 aa12.66□□□□□ -0.38
SSBP1-210ENST00000481508 TDO2P48775 406 aa12.66□□□□□ -0.38
SSBP1-210ENST00000481508 SBK1Q52WX2 424 aa12.66□□□□□ -0.38
SSBP1-210ENST00000481508 IFNL1Q8IU54 200 aa12.66□□□□□ -0.38
SSBP1-210ENST00000481508 CLEC10AQ8IUN9 316 aa12.66□□□□□ -0.38
SSBP1-210ENST00000481508 TRIM34Q9BYJ4 488 aa12.66□□□□□ -0.38
SSBP1-210ENST00000481508 PICK1Q9NRD5 415 aa12.66□□□□□ -0.38
SSBP1-210ENST00000481508 DIAPH3Q9NSV4 1193 aa12.66□□□□□ -0.38
SSBP1-210ENST00000481508 ARPP21Q9UBL0 812 aaPredicted RBP12.66□□□□□ -0.38
SSBP1-210ENST00000481508 KCNH4Q9UQ05 1017 aa12.66□□□□□ -0.38
SSBP1-210ENST00000481508 ZHX2Q9Y6X8 837 aa12.66□□□□□ -0.38
SSBP1-210ENST00000481508 MYH4Q9Y623 1939 aa12.65□□□□□ -0.38
SSBP1-210ENST00000481508 CCL15-CCL14A0A0B4J2E2 113 aa12.65□□□□□ -0.38
SSBP1-210ENST00000481508 MINDY4BA8MYZ0 360 aa12.65□□□□□ -0.38
SSBP1-210ENST00000481508 ATMINO43313 823 aaPredicted RBP12.65□□□□□ -0.38
SSBP1-210ENST00000481508 APPP05067 770 aa12.65□□□□□ -0.38
SSBP1-210ENST00000481508 AKR1B1P15121 316 aa12.65□□□□□ -0.38
SSBP1-210ENST00000481508 CHMLP26374 656 aa12.65□□□□□ -0.38
SSBP1-210ENST00000481508 CDK8P49336 464 aa12.65□□□□□ -0.38
SSBP1-210ENST00000481508 CCL15Q16663 113 aa12.65□□□□□ -0.38
SSBP1-210ENST00000481508 ERICH6BQ5W0A0 696 aa12.65□□□□□ -0.38
SSBP1-210ENST00000481508 GIMAP6Q6P9H5 292 aa12.65□□□□□ -0.38
SSBP1-210ENST00000481508 C16orf86Q6ZW13 317 aa12.65□□□□□ -0.38
SSBP1-210ENST00000481508 FAM43AQ8N2R8 423 aa12.65□□□□□ -0.38
SSBP1-210ENST00000481508 INCENPQ9NQS7 918 aa12.65□□□□□ -0.38
SSBP1-210ENST00000481508 TRIM75PA6NK02 468 aa12.64□□□□□ -0.39
SSBP1-210ENST00000481508 BTBD19C9JJ37 291 aa12.64□□□□□ -0.39
SSBP1-210ENST00000481508 HSPD1P10809 573 aaKnown RBP12.64□□□□□ -0.39
SSBP1-210ENST00000481508 GTF2A2P52657 109 aa12.64□□□□□ -0.39
SSBP1-210ENST00000481508 SREBF2Q12772 1141 aa12.64□□□□□ -0.39
SSBP1-210ENST00000481508 CERKLQ49MI3 558 aaPredicted RBP12.64□□□□□ -0.39
SSBP1-210ENST00000481508 TICAM2Q86XR7 235 aa12.64□□□□□ -0.39
SSBP1-210ENST00000481508 NKX2-3Q8TAU0 364 aa12.64□□□□□ -0.39
SSBP1-210ENST00000481508 NBPF3Q9H094 633 aa12.64□□□□□ -0.39
SSBP1-210ENST00000481508 NAPBQ9H115 298 aa12.64□□□□□ -0.39
SSBP1-210ENST00000481508 PARP14Q460N5 1801 aa12.63□□□□□ -0.39
SSBP1-210ENST00000481508 A0A0G2JLL6 359 aaPredicted RBP12.63□□□□□ -0.39
SSBP1-210ENST00000481508 USP17L5A8MUK1 530 aa12.63□□□□□ -0.39
SSBP1-210ENST00000481508 GPR25O00155 361 aa12.63□□□□□ -0.39
SSBP1-210ENST00000481508 PRDM1O75626 825 aa12.63□□□□□ -0.39
SSBP1-210ENST00000481508 EN2P19622 333 aaPredicted RBP12.63□□□□□ -0.39
SSBP1-210ENST00000481508 NUBP1P53384 320 aa12.63□□□□□ -0.39
SSBP1-210ENST00000481508 CTDSPL2Q05D32 466 aa12.63□□□□□ -0.39
SSBP1-210ENST00000481508 PPARAQ07869 468 aa12.63□□□□□ -0.39
SSBP1-210ENST00000481508 SPP2Q13103 211 aa12.63□□□□□ -0.39
SSBP1-210ENST00000481508 SNAPC2Q13487 334 aa12.63□□□□□ -0.39
SSBP1-210ENST00000481508 SEPT2Q15019 361 aa12.63□□□□□ -0.39
SSBP1-210ENST00000481508 ABCB5Q2M3G0 1257 aa12.63□□□□□ -0.39
SSBP1-210ENST00000481508 GPAT2Q6NUI2 795 aa12.63□□□□□ -0.39
SSBP1-210ENST00000481508 PRRT2Q7Z6L0 340 aaPredicted RBP12.63□□□□□ -0.39
SSBP1-210ENST00000481508 ACER1Q8TDN7 264 aa12.63□□□□□ -0.39
SSBP1-210ENST00000481508 DDRGK1Q96HY6 314 aa12.63□□□□□ -0.39
SSBP1-210ENST00000481508 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.63□□□□□ -0.39
SSBP1-210ENST00000481508 VCANP13611 3396 aa12.63□□□□□ -0.39
SSBP1-210ENST00000481508 CXCL11O14625 94 aa12.62□□□□□ -0.39
SSBP1-210ENST00000481508 FGAP02671 866 aa12.62□□□□□ -0.39
SSBP1-210ENST00000481508 ASNSP08243 561 aa12.62□□□□□ -0.39
SSBP1-210ENST00000481508 CETPP11597 493 aa12.62□□□□□ -0.39
SSBP1-210ENST00000481508 RASA1P20936 1047 aa12.62□□□□□ -0.39
SSBP1-210ENST00000481508 ALX1Q15699 326 aa12.62□□□□□ -0.39
SSBP1-210ENST00000481508 BMP2KLQ5H9B9 411 aa12.62□□□□□ -0.39
SSBP1-210ENST00000481508 TREML2Q5T2D2 321 aa12.62□□□□□ -0.39
SSBP1-210ENST00000481508 ZNF280CQ8ND82 737 aa12.62□□□□□ -0.39
SSBP1-210ENST00000481508 SWAP70Q9UH65 585 aa12.62□□□□□ -0.39
SSBP1-210ENST00000481508 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.62□□□□□ -0.39
SSBP1-210ENST00000481508 RLFQ13129 1914 aa12.62□□□□□ -0.39
SSBP1-210ENST00000481508 A0A1W2PRG0 241 aa12.61□□□□□ -0.39
SSBP1-210ENST00000481508 HIP1O00291 1037 aa12.61□□□□□ -0.39
SSBP1-210ENST00000481508 MPHOSPH10O00566 681 aaKnown RBP12.61□□□□□ -0.39
SSBP1-210ENST00000481508 HMGCS2P54868 508 aa12.61□□□□□ -0.39
SSBP1-210ENST00000481508 HAND2P61296 217 aa12.61□□□□□ -0.39
SSBP1-210ENST00000481508 PTH1RQ03431 593 aa12.61□□□□□ -0.39
SSBP1-210ENST00000481508 CRHR2Q13324 411 aa12.61□□□□□ -0.39
SSBP1-210ENST00000481508 MTMR2Q13614 643 aa12.61□□□□□ -0.39
SSBP1-210ENST00000481508 RAB3GAP1Q15042 981 aa12.61□□□□□ -0.39
SSBP1-210ENST00000481508 GADL1Q6ZQY3 521 aa12.61□□□□□ -0.39
SSBP1-210ENST00000481508 SIAH1Q8IUQ4 282 aa12.61□□□□□ -0.39
SSBP1-210ENST00000481508 TBC1D10CQ8IV04 446 aa12.61□□□□□ -0.39
SSBP1-210ENST00000481508 AMOTL1Q8IY63 956 aa12.61□□□□□ -0.39
SSBP1-210ENST00000481508 WDR18Q9BV38 432 aa12.61□□□□□ -0.39
SSBP1-210ENST00000481508 NACAP1Q9BZK3 213 aa12.61□□□□□ -0.39
SSBP1-210ENST00000481508 MGAMO43451 1857 aa12.6□□□□□ -0.39
SSBP1-210ENST00000481508 H0YGN5 161 aa12.6□□□□□ -0.39
SSBP1-210ENST00000481508 SGSM2O43147 1006 aa12.6□□□□□ -0.39
SSBP1-210ENST00000481508 INHBEP58166 350 aa12.6□□□□□ -0.39
SSBP1-210ENST00000481508 CAP1Q01518 475 aa12.6□□□□□ -0.39
SSBP1-210ENST00000481508 ZYXQ15942 572 aaKnown RBP12.6□□□□□ -0.39
SSBP1-210ENST00000481508 KIAA1755Q5JYT7 1200 aa12.6□□□□□ -0.39
SSBP1-210ENST00000481508 ZMYM6O95789 1325 aa12.6□□□□□ -0.39
SSBP1-210ENST00000481508 RAD50Q92878 1312 aa12.6□□□□□ -0.39
SSBP1-210ENST00000481508 ADGRA2Q96PE1 1338 aa12.6□□□□□ -0.39
SSBP1-210ENST00000481508 PDHXO00330 501 aa12.59□□□□□ -0.39
SSBP1-210ENST00000481508 MAP3K13O43283 966 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms