RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 DLATP10515 647 aaKnown RBP12.81□□□□□ -0.36
TRIM27-205ENST00000481474 UBXN2AP68543 259 aa12.81□□□□□ -0.36
TRIM27-205ENST00000481474 LZICQ8WZA0 190 aa12.81□□□□□ -0.36
TRIM27-205ENST00000481474 CHPF2Q9P2E5 772 aa12.81□□□□□ -0.36
TRIM27-205ENST00000481474 UPP2O95045 317 aa12.81□□□□□ -0.36
TRIM27-205ENST00000481474 MFSD4BQ5TF39 518 aa12.81□□□□□ -0.36
TRIM27-205ENST00000481474 LMBR1Q8WVP7 490 aa12.81□□□□□ -0.36
TRIM27-205ENST00000481474 VPS37BQ9H9H4 285 aa12.81□□□□□ -0.36
TRIM27-205ENST00000481474 KRT82Q9NSB4 513 aa12.81□□□□□ -0.36
TRIM27-205ENST00000481474 PRDM1O75626 825 aa12.81□□□□□ -0.36
TRIM27-205ENST00000481474 TEX13AQ9BXU3 409 aaPredicted RBP12.81□□□□□ -0.36
TRIM27-205ENST00000481474 NKIRAS1Q9NYS0 192 aa12.81□□□□□ -0.36
TRIM27-205ENST00000481474 AFF4Q9UHB7 1163 aaKnown RBP12.81□□□□□ -0.36
TRIM27-205ENST00000481474 APOA4P06727 396 aa12.81□□□□□ -0.36
TRIM27-205ENST00000481474 HLA-DPA1P20036 260 aa12.81□□□□□ -0.36
TRIM27-205ENST00000481474 KIAA0825Q8IV33 1275 aa12.81□□□□□ -0.36
TRIM27-205ENST00000481474 PA2G4Q9UQ80 394 aaKnown RBP12.81□□□□□ -0.36
TRIM27-205ENST00000481474 EMILIN1Q9Y6C2 1016 aa12.81□□□□□ -0.36
TRIM27-205ENST00000481474 BAG2O95816 211 aa12.8□□□□□ -0.36
TRIM27-205ENST00000481474 UQCRFS1P1P0C7P4 283 aa12.8□□□□□ -0.36
TRIM27-205ENST00000481474 NSUN2Q08J23 767 aaKnown RBP eCLIP12.8□□□□□ -0.36
TRIM27-205ENST00000481474 KCNA1Q09470 495 aa12.8□□□□□ -0.36
TRIM27-205ENST00000481474 Q6ZUG5 572 aa12.8□□□□□ -0.36
TRIM27-205ENST00000481474 NLRX1Q86UT6 975 aa12.8□□□□□ -0.36
TRIM27-205ENST00000481474 DTNBO60941 627 aa12.8□□□□□ -0.36
TRIM27-205ENST00000481474 CYP2J2P51589 502 aa12.8□□□□□ -0.36
TRIM27-205ENST00000481474 AOPEPQ8N6M6 819 aa12.8□□□□□ -0.36
TRIM27-205ENST00000481474 NEUROD4Q9HD90 331 aa12.8□□□□□ -0.36
TRIM27-205ENST00000481474 MTRF1LQ9UGC7 380 aaKnown RBP12.8□□□□□ -0.36
TRIM27-205ENST00000481474 ARHGAP42A6NI28 874 aa12.8□□□□□ -0.36
TRIM27-205ENST00000481474 LRRIQ4A6NIV6 560 aa12.8□□□□□ -0.36
TRIM27-205ENST00000481474 RSPH10B2B2RC85 870 aa12.8□□□□□ -0.36
TRIM27-205ENST00000481474 RSPH10BP0C881 870 aa12.8□□□□□ -0.36
TRIM27-205ENST00000481474 CCDC85BQ15834 202 aaPredicted RBP12.8□□□□□ -0.36
TRIM27-205ENST00000481474 STX1AQ16623 288 aa12.8□□□□□ -0.36
TRIM27-205ENST00000481474 NCKAP5LQ9HCH0 1330 aa12.8□□□□□ -0.36
TRIM27-205ENST00000481474 ATF7P17544 494 aaPredicted RBP12.8□□□□□ -0.36
TRIM27-205ENST00000481474 NFX1Q12986 1120 aaKnown RBP12.8□□□□□ -0.36
TRIM27-205ENST00000481474 LMBR1LQ6UX01 489 aa12.8□□□□□ -0.36
TRIM27-205ENST00000481474 MAPKAPK5Q8IW41 473 aa12.8□□□□□ -0.36
TRIM27-205ENST00000481474 ERLEC1Q96DZ1 483 aa12.8□□□□□ -0.36
TRIM27-205ENST00000481474 MAD1L1Q9Y6D9 718 aa12.8□□□□□ -0.36
TRIM27-205ENST00000481474 SNRPA1P09661 255 aaKnown RBP12.8□□□□□ -0.36
TRIM27-205ENST00000481474 SLC1A4P43007 532 aa12.8□□□□□ -0.36
TRIM27-205ENST00000481474 DBF4Q9UBU7 674 aaPredicted RBP12.8□□□□□ -0.36
TRIM27-205ENST00000481474 RNF8O76064 485 aa12.8□□□□□ -0.36
TRIM27-205ENST00000481474 COG7P83436 770 aa12.8□□□□□ -0.36
TRIM27-205ENST00000481474 LLGL1Q15334 1064 aa12.8□□□□□ -0.36
TRIM27-205ENST00000481474 CCDC183Q5T5S1 534 aa12.8□□□□□ -0.36
TRIM27-205ENST00000481474 RINLQ6ZS11 566 aa12.8□□□□□ -0.36
TRIM27-205ENST00000481474 GPR161Q8N6U8 529 aaKnown RBP12.8□□□□□ -0.36
TRIM27-205ENST00000481474 NFATC2IPQ8NCF5 419 aa12.8□□□□□ -0.36
TRIM27-205ENST00000481474 TGFBRAP1Q8WUH2 860 aa12.8□□□□□ -0.36
TRIM27-205ENST00000481474 TEKT4Q8WW24 435 aa12.8□□□□□ -0.36
TRIM27-205ENST00000481474 G3BP2Q9UN86 482 aaKnown RBP12.8□□□□□ -0.36
TRIM27-205ENST00000481474 USH1CQ9Y6N9 552 aa12.8□□□□□ -0.36
TRIM27-205ENST00000481474 KRT15P19012 456 aa12.79□□□□□ -0.36
TRIM27-205ENST00000481474 PCK1P35558 622 aa12.79□□□□□ -0.36
TRIM27-205ENST00000481474 VCX3BQ9H321 246 aa12.79□□□□□ -0.36
TRIM27-205ENST00000481474 GTF2IP78347 998 aa12.79□□□□□ -0.36
TRIM27-205ENST00000481474 PPP1R14AQ96A00 147 aa12.79□□□□□ -0.36
TRIM27-205ENST00000481474 COPRSQ9NQ92 184 aa12.79□□□□□ -0.36
TRIM27-205ENST00000481474 FRMD3A2A2Y4 597 aa12.79□□□□□ -0.36
TRIM27-205ENST00000481474 CTAGE5O15320 804 aa12.79□□□□□ -0.36
TRIM27-205ENST00000481474 DDX53Q86TM3 631 aaKnown RBP12.79□□□□□ -0.36
TRIM27-205ENST00000481474 PPFIBP2Q8ND30 876 aa12.79□□□□□ -0.36
TRIM27-205ENST00000481474 ADPGKQ9BRR6 497 aa12.79□□□□□ -0.36
TRIM27-205ENST00000481474 DNAI1Q9UI46 699 aa12.79□□□□□ -0.36
TRIM27-205ENST00000481474 STK38LQ9Y2H1 464 aa12.79□□□□□ -0.36
TRIM27-205ENST00000481474 CTAGE15A4D2H0 777 aa12.79□□□□□ -0.36
TRIM27-205ENST00000481474 CTAGE8P0CG41 777 aa12.79□□□□□ -0.36
TRIM27-205ENST00000481474 FYB2Q5VWT5 728 aa12.79□□□□□ -0.36
TRIM27-205ENST00000481474 CTAGE4Q8IX94 777 aa12.79□□□□□ -0.36
TRIM27-205ENST00000481474 MCUR1Q96AQ8 359 aa12.79□□□□□ -0.36
TRIM27-205ENST00000481474 TTC14Q96N46 770 aa12.79□□□□□ -0.36
TRIM27-205ENST00000481474 POLKQ9UBT6 870 aa12.79□□□□□ -0.36
TRIM27-205ENST00000481474 PPFIA2O75334 1257 aa12.79□□□□□ -0.36
TRIM27-205ENST00000481474 ELMOD1Q8N336 334 aa12.79□□□□□ -0.36
TRIM27-205ENST00000481474 RTEL1Q9NZ71 1219 aa12.79□□□□□ -0.36
TRIM27-205ENST00000481474 STMN4Q9H169 189 aaPredicted RBP12.78□□□□□ -0.36
TRIM27-205ENST00000481474 SAMD15Q9P1V8 674 aa12.78□□□□□ -0.36
TRIM27-205ENST00000481474 PTK2BQ14289 1009 aa12.78□□□□□ -0.36
TRIM27-205ENST00000481474 HHATQ5VTY9 493 aa12.78□□□□□ -0.36
TRIM27-205ENST00000481474 C1orf131Q8NDD1 294 aaKnown RBP12.78□□□□□ -0.36
TRIM27-205ENST00000481474 NLRP7Q8WX94 980 aa12.78□□□□□ -0.36
TRIM27-205ENST00000481474 VCXQ9H320 206 aa12.78□□□□□ -0.36
TRIM27-205ENST00000481474 SCAPERQ9BY12 1400 aa12.78□□□□□ -0.36
TRIM27-205ENST00000481474 ANKRD42Q8N9B4 389 aa12.78□□□□□ -0.36
TRIM27-205ENST00000481474 VPS16Q9H269 839 aa12.78□□□□□ -0.36
TRIM27-205ENST00000481474 ZC3H12BQ5HYM0 836 aaKnown RBP12.78□□□□□ -0.36
TRIM27-205ENST00000481474 FBXO31Q5XUX0 539 aaPredicted RBP12.78□□□□□ -0.36
TRIM27-205ENST00000481474 SPICE1Q8N0Z3 855 aa12.78□□□□□ -0.36
TRIM27-205ENST00000481474 HOOK2Q96ED9 719 aa12.78□□□□□ -0.36
TRIM27-205ENST00000481474 LRPPRCP42704 1394 aaKnown RBP12.78□□□□□ -0.36
TRIM27-205ENST00000481474 TRIM37O94972 964 aa12.78□□□□□ -0.36
TRIM27-205ENST00000481474 ZNF853P0CG23 659 aa12.78□□□□□ -0.36
TRIM27-205ENST00000481474 STMN1P16949 149 aa12.78□□□□□ -0.36
TRIM27-205ENST00000481474 SV2BQ7L1I2 683 aa12.78□□□□□ -0.36
TRIM27-205ENST00000481474 RPGRIP1Q96KN7 1286 aa12.78□□□□□ -0.36
TRIM27-205ENST00000481474 DDX21Q9NR30 783 aaKnown RBP eCLIP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms