RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 NOP9Q86U38 636 aaKnown RBP13.19□□□□□ -0.3
CUL3-209ENST00000481135 PRDM10Q9NQV6 1147 aa13.19□□□□□ -0.3
CUL3-209ENST00000481135 ZNF746Q6NUN9 644 aaPredicted RBP13.18□□□□□ -0.3
CUL3-209ENST00000481135 LETMD1Q6P1Q0 360 aa13.18□□□□□ -0.3
CUL3-209ENST00000481135 SEZ6L2Q6UXD5 910 aa13.18□□□□□ -0.3
CUL3-209ENST00000481135 LRP10Q7Z4F1 713 aa13.18□□□□□ -0.3
CUL3-209ENST00000481135 BAHD1Q8TBE0 780 aaPredicted RBP13.18□□□□□ -0.3
CUL3-209ENST00000481135 MRFAP1L1Q96HT8 127 aa13.18□□□□□ -0.3
CUL3-209ENST00000481135 MIPEPQ99797 713 aa13.18□□□□□ -0.3
CUL3-209ENST00000481135 STOML1Q9UBI4 398 aa13.18□□□□□ -0.3
CUL3-209ENST00000481135 CEP131Q9UPN4 1083 aa13.18□□□□□ -0.3
CUL3-209ENST00000481135 RAXQ9Y2V3 346 aa13.18□□□□□ -0.3
CUL3-209ENST00000481135 FAM86C2PA6NEL3 165 aa13.17□□□□□ -0.3
CUL3-209ENST00000481135 DDAH1O94760 285 aa13.17□□□□□ -0.3
CUL3-209ENST00000481135 POLR2BP30876 1174 aaKnown RBP13.17□□□□□ -0.3
CUL3-209ENST00000481135 ETV3P41162 512 aa13.17□□□□□ -0.3
CUL3-209ENST00000481135 NCAPHQ15003 741 aa13.17□□□□□ -0.3
CUL3-209ENST00000481135 ZYXQ15942 572 aaKnown RBP13.17□□□□□ -0.3
CUL3-209ENST00000481135 PSMG3-AS1Q96PY0 264 aa13.17□□□□□ -0.3
CUL3-209ENST00000481135 ST7Q9NRC1 585 aa13.17□□□□□ -0.3
CUL3-209ENST00000481135 DYNC1LI2O43237 492 aaPredicted RBP13.16□□□□□ -0.3
CUL3-209ENST00000481135 CLEC3AO75596 197 aa13.16□□□□□ -0.3
CUL3-209ENST00000481135 BMS1Q14692 1282 aaKnown RBP13.16□□□□□ -0.3
CUL3-209ENST00000481135 CELF2-AS1Q8N7Q2 184 aa13.16□□□□□ -0.3
CUL3-209ENST00000481135 SRPK1Q96SB4 655 aaKnown RBP13.16□□□□□ -0.3
CUL3-209ENST00000481135 UBOX5O94941 541 aa13.15□□□□□ -0.3
CUL3-209ENST00000481135 GDF11O95390 407 aa13.15□□□□□ -0.3
CUL3-209ENST00000481135 CDK5R2Q13319 367 aa13.15□□□□□ -0.3
CUL3-209ENST00000481135 VHLLQ6RSH7 139 aa13.15□□□□□ -0.3
CUL3-209ENST00000481135 FAM178BQ8IXR5 827 aa13.15□□□□□ -0.3
CUL3-209ENST00000481135 SLC6A18Q96N87 628 aa13.15□□□□□ -0.3
CUL3-209ENST00000481135 CCDC113Q9H0I3 377 aa13.15□□□□□ -0.3
CUL3-209ENST00000481135 C1GALT1Q9NS00 363 aa13.15□□□□□ -0.3
CUL3-209ENST00000481135 CDK11AQ9UQ88 783 aaPredicted RBP13.15□□□□□ -0.3
CUL3-209ENST00000481135 MAPK8IP1Q9UQF2 711 aa13.15□□□□□ -0.3
CUL3-209ENST00000481135 LTBP3Q9NS15 1303 aa13.14□□□□□ -0.31
CUL3-209ENST00000481135 CYP7A1P22680 504 aa13.14□□□□□ -0.31
CUL3-209ENST00000481135 PMS1P54277 932 aaKnown RBP13.14□□□□□ -0.31
CUL3-209ENST00000481135 SLC7A5Q01650 507 aa13.14□□□□□ -0.31
CUL3-209ENST00000481135 GNPTABQ3T906 1256 aa13.14□□□□□ -0.31
CUL3-209ENST00000481135 TMEM151AQ8N4L1 468 aa13.14□□□□□ -0.31
CUL3-209ENST00000481135 SMARCC1Q92922 1105 aaPredicted RBP13.14□□□□□ -0.31
CUL3-209ENST00000481135 SUCOQ9UBS9 1254 aaKnown RBP13.14□□□□□ -0.31
CUL3-209ENST00000481135 ZNF214Q9UL59 606 aaPredicted RBP13.14□□□□□ -0.31
CUL3-209ENST00000481135 SLITRK5O94991 958 aa13.13□□□□□ -0.31
CUL3-209ENST00000481135 RNF4P78317 190 aa13.13□□□□□ -0.31
CUL3-209ENST00000481135 C6orf15Q6UXA7 325 aaPredicted RBP13.13□□□□□ -0.31
CUL3-209ENST00000481135 TOP6BLQ8N6T0 577 aa13.13□□□□□ -0.31
CUL3-209ENST00000481135 DEPDC7Q96QD5 511 aa13.13□□□□□ -0.31
CUL3-209ENST00000481135 PRR23CQ6ZRP0 262 aa13.12□□□□□ -0.31
CUL3-209ENST00000481135 TMEM192Q8IY95 271 aa13.12□□□□□ -0.31
CUL3-209ENST00000481135 COX4I2Q96KJ9 171 aa13.12□□□□□ -0.31
CUL3-209ENST00000481135 TBC1D32Q96NH3 1257 aa13.12□□□□□ -0.31
CUL3-209ENST00000481135 C7orf69Q9H7B7 122 aa13.12□□□□□ -0.31
CUL3-209ENST00000481135 TPX2Q9ULW0 747 aaKnown RBP13.12□□□□□ -0.31
CUL3-209ENST00000481135 MSRB2Q9Y3D2 182 aa13.12□□□□□ -0.31
CUL3-209ENST00000481135 HMX2A2RU54 273 aa13.11□□□□□ -0.31
CUL3-209ENST00000481135 CCDC85CA6NKD9 419 aa13.11□□□□□ -0.31
CUL3-209ENST00000481135 GJB6O95452 261 aa13.11□□□□□ -0.31
CUL3-209ENST00000481135 CDH24Q86UP0 819 aa13.11□□□□□ -0.31
CUL3-209ENST00000481135 DNAJB8Q8NHS0 232 aa13.11□□□□□ -0.31
CUL3-209ENST00000481135 PPP1R13LQ8WUF5 828 aa13.11□□□□□ -0.31
CUL3-209ENST00000481135 DUSP23Q9BVJ7 150 aa13.11□□□□□ -0.31
CUL3-209ENST00000481135 CYP27A1Q02318 531 aa13.1□□□□□ -0.31
CUL3-209ENST00000481135 PLA2G4EQ3MJ16 856 aa13.1□□□□□ -0.31
CUL3-209ENST00000481135 CYP27C1Q4G0S4 372 aa13.1□□□□□ -0.31
CUL3-209ENST00000481135 SNTG2Q9NY99 539 aa13.1□□□□□ -0.31
CUL3-209ENST00000481135 PDPK1O15530 556 aa13.09□□□□□ -0.31
CUL3-209ENST00000481135 FAM87AP0C7U9 286 aa13.09□□□□□ -0.31
CUL3-209ENST00000481135 NAT2P11245 290 aa13.09□□□□□ -0.31
CUL3-209ENST00000481135 IFRD2Q12894 506 aaPredicted RBP13.09□□□□□ -0.31
CUL3-209ENST00000481135 KIAA1211LQ6NV74 962 aa13.09□□□□□ -0.31
CUL3-209ENST00000481135 OGFOD3Q6PK18 319 aa13.09□□□□□ -0.31
CUL3-209ENST00000481135 EEPD1Q7L9B9 569 aa13.09□□□□□ -0.31
CUL3-209ENST00000481135 ZAR1Q86SH2 424 aa13.09□□□□□ -0.31
CUL3-209ENST00000481135 MICAL1Q8TDZ2 1067 aa13.09□□□□□ -0.31
CUL3-209ENST00000481135 KREMEN1Q96MU8 473 aa13.09□□□□□ -0.31
CUL3-209ENST00000481135 ASPNQ9BXN1 380 aa13.09□□□□□ -0.31
CUL3-209ENST00000481135 PIF1Q9H611 641 aa13.09□□□□□ -0.31
CUL3-209ENST00000481135 PCDHB10Q9UN67 800 aa13.09□□□□□ -0.31
CUL3-209ENST00000481135 GSK3AP49840 483 aa13.08□□□□□ -0.32
CUL3-209ENST00000481135 RASGRF1Q13972 1273 aa13.08□□□□□ -0.32
CUL3-209ENST00000481135 RIN3Q8TB24 985 aa13.08□□□□□ -0.32
CUL3-209ENST00000481135 RNF141Q8WVD5 230 aa13.08□□□□□ -0.32
CUL3-209ENST00000481135 MKRN2Q9H000 416 aaKnown RBP13.08□□□□□ -0.32
CUL3-209ENST00000481135 GTF2IRD1Q9UHL9 959 aa13.08□□□□□ -0.32
CUL3-209ENST00000481135 LOC105371045A0A1W2PR82 267 aa13.07□□□□□ -0.32
CUL3-209ENST00000481135 GSC2O15499 205 aa13.07□□□□□ -0.32
CUL3-209ENST00000481135 RASA3Q14644 834 aa13.07□□□□□ -0.32
CUL3-209ENST00000481135 CCDC144CPQ8IYA2 1237 aa13.07□□□□□ -0.32
CUL3-209ENST00000481135 PRDM5Q9NQX1 630 aaPredicted RBP13.07□□□□□ -0.32
CUL3-209ENST00000481135 TPSG1Q9NRR2 321 aa13.07□□□□□ -0.32
CUL3-209ENST00000481135 B2RBV5 119 aa13.06□□□□□ -0.32
CUL3-209ENST00000481135 RNF43Q68DV7 783 aa13.06□□□□□ -0.32
CUL3-209ENST00000481135 FBXL18Q96ME1 805 aa13.06□□□□□ -0.32
CUL3-209ENST00000481135 TMA7Q9Y2S6 64 aaKnown RBP13.06□□□□□ -0.32
CUL3-209ENST00000481135 EOMESO95936 686 aa13.05□□□□□ -0.32
CUL3-209ENST00000481135 ZNF143P52747 638 aaPredicted RBP13.05□□□□□ -0.32
CUL3-209ENST00000481135 NBPF12Q5TAG4 269 aaPredicted RBP13.05□□□□□ -0.32
CUL3-209ENST00000481135 DUSP27Q5VZP5 1158 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms