RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 INHBEP58166 350 aa17.97■□□□□ 0.47
ABCF3-213ENST00000480539 FAM47AQ5JRC9 791 aa17.97■□□□□ 0.47
ABCF3-213ENST00000480539 RRP12Q5JTH9 1297 aaKnown RBP17.97■□□□□ 0.47
ABCF3-213ENST00000480539 ACER1Q8TDN7 264 aa17.97■□□□□ 0.47
ABCF3-213ENST00000480539 ANO2Q9NQ90 1003 aa17.97■□□□□ 0.47
ABCF3-213ENST00000480539 PLIN4Q96Q06 1357 aa17.96■□□□□ 0.47
ABCF3-213ENST00000480539 USP17L10C9JJH3 530 aa17.96■□□□□ 0.47
ABCF3-213ENST00000480539 ZNF213O14771 459 aa17.96■□□□□ 0.47
ABCF3-213ENST00000480539 IMMTQ16891 758 aaKnown RBP17.96■□□□□ 0.47
ABCF3-213ENST00000480539 ZNF444Q8N0Y2 327 aaPredicted RBP17.96■□□□□ 0.47
ABCF3-213ENST00000480539 STAG1Q8WVM7 1258 aa17.96■□□□□ 0.47
ABCF3-213ENST00000480539 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.96■□□□□ 0.47
ABCF3-213ENST00000480539 LSG1Q9H089 658 aaKnown RBP17.96■□□□□ 0.47
ABCF3-213ENST00000480539 SAGE1Q9NXZ1 904 aa17.96■□□□□ 0.47
ABCF3-213ENST00000480539 CTNNA3Q9UI47 895 aa17.96■□□□□ 0.47
ABCF3-213ENST00000480539 GTF3C3Q9Y5Q9 886 aa17.96■□□□□ 0.47
ABCF3-213ENST00000480539 TSPY3P0CV98 308 aa17.95■□□□□ 0.46
ABCF3-213ENST00000480539 TSPY8P0CW00 308 aa17.95■□□□□ 0.46
ABCF3-213ENST00000480539 BACE1P56817 501 aa17.95■□□□□ 0.46
ABCF3-213ENST00000480539 ATP2B2Q01814 1243 aa17.95■□□□□ 0.46
ABCF3-213ENST00000480539 AKNAD1Q5T1N1 836 aa17.95■□□□□ 0.46
ABCF3-213ENST00000480539 TREML2Q5T2D2 321 aa17.95■□□□□ 0.46
ABCF3-213ENST00000480539 KIAA1211Q6ZU35 1233 aa17.95■□□□□ 0.46
ABCF3-213ENST00000480539 RBM8AQ9Y5S9 174 aaKnown RBP17.95■□□□□ 0.46
ABCF3-213ENST00000480539 U3KPZ7 1027 aaPredicted RBP17.95■□□□□ 0.46
ABCF3-213ENST00000480539 A0A1W2PRG0 241 aa17.94■□□□□ 0.46
ABCF3-213ENST00000480539 TSPY2A6NKD2 308 aa17.94■□□□□ 0.46
ABCF3-213ENST00000480539 CA12O43570 354 aa17.94■□□□□ 0.46
ABCF3-213ENST00000480539 ORC4O43929 436 aa17.94■□□□□ 0.46
ABCF3-213ENST00000480539 RANBP6O60518 1105 aaKnown RBP17.94■□□□□ 0.46
ABCF3-213ENST00000480539 TBC1D8O95759 1140 aa17.94■□□□□ 0.46
ABCF3-213ENST00000480539 TAF1CQ15572 869 aaPredicted RBP17.94■□□□□ 0.46
ABCF3-213ENST00000480539 SH3D19Q5HYK7 790 aa17.94■□□□□ 0.46
ABCF3-213ENST00000480539 OTUD7BQ6GQQ9 843 aa17.94■□□□□ 0.46
ABCF3-213ENST00000480539 GPAT2Q6NUI2 795 aa17.94■□□□□ 0.46
ABCF3-213ENST00000480539 FASTKD5Q7L8L6 764 aaKnown RBP17.94■□□□□ 0.46
ABCF3-213ENST00000480539 ANKRD23Q86SG2 305 aa17.94■□□□□ 0.46
ABCF3-213ENST00000480539 PROCA1Q8NCQ7 364 aaPredicted RBP17.94■□□□□ 0.46
ABCF3-213ENST00000480539 ARHGEF10LQ9HCE6 1279 aa17.94■□□□□ 0.46
ABCF3-213ENST00000480539 IGKV6D-41A0A0C4DH26 115 aa17.93■□□□□ 0.46
ABCF3-213ENST00000480539 PDHXO00330 501 aa17.93■□□□□ 0.46
ABCF3-213ENST00000480539 ALDH1A1P00352 501 aa17.93■□□□□ 0.46
ABCF3-213ENST00000480539 HSPA8P11142 646 aaKnown RBP17.93■□□□□ 0.46
ABCF3-213ENST00000480539 EEF2P13639 858 aaKnown RBP17.93■□□□□ 0.46
ABCF3-213ENST00000480539 TFAP4Q01664 338 aa17.93■□□□□ 0.46
ABCF3-213ENST00000480539 CRHR2Q13324 411 aa17.93■□□□□ 0.46
ABCF3-213ENST00000480539 MFSD6Q6ZSS7 791 aa17.93■□□□□ 0.46
ABCF3-213ENST00000480539 NKX2-3Q8TAU0 364 aa17.93■□□□□ 0.46
ABCF3-213ENST00000480539 MAP4K1Q92918 833 aa17.93■□□□□ 0.46
ABCF3-213ENST00000480539 CEP95Q96GE4 821 aa17.93■□□□□ 0.46
ABCF3-213ENST00000480539 R3HDMLQ9H3Y0 253 aa17.93■□□□□ 0.46
ABCF3-213ENST00000480539 RNF41Q9H4P4 317 aaPredicted RBP17.93■□□□□ 0.46
ABCF3-213ENST00000480539 TMOD4Q9NZQ9 345 aa17.93■□□□□ 0.46
ABCF3-213ENST00000480539 AGTPBP1Q9UPW5 1226 aa17.93■□□□□ 0.46
ABCF3-213ENST00000480539 TAF6LQ9Y6J9 622 aa17.93■□□□□ 0.46
ABCF3-213ENST00000480539 CYP21A2P08686 494 aa17.92■□□□□ 0.46
ABCF3-213ENST00000480539 FGRP09769 529 aa17.92■□□□□ 0.46
ABCF3-213ENST00000480539 USP17L2Q6R6M4 530 aa17.92■□□□□ 0.46
ABCF3-213ENST00000480539 NEDD1Q8NHV4 660 aa17.92■□□□□ 0.46
ABCF3-213ENST00000480539 KIAA1683Q9H0B3 1180 aa17.92■□□□□ 0.46
ABCF3-213ENST00000480539 KANSL2Q9H9L4 492 aa17.92■□□□□ 0.46
ABCF3-213ENST00000480539 EMILIN3Q9NT22 766 aa17.92■□□□□ 0.46
ABCF3-213ENST00000480539 C19orf81C9J6K1 198 aa17.91■□□□□ 0.46
ABCF3-213ENST00000480539 NMT2O60551 498 aa17.91■□□□□ 0.46
ABCF3-213ENST00000480539 CTCFP49711 727 aaPredicted RBP17.91■□□□□ 0.46
ABCF3-213ENST00000480539 USP14P54578 494 aa17.91■□□□□ 0.46
ABCF3-213ENST00000480539 SIAH1Q8IUQ4 282 aa17.91■□□□□ 0.46
ABCF3-213ENST00000480539 SH2D4AQ9H788 454 aa17.91■□□□□ 0.46
ABCF3-213ENST00000480539 B4E1Z4 1266 aa17.9■□□□□ 0.46
ABCF3-213ENST00000480539 CYP2C8P10632 490 aa17.9■□□□□ 0.46
ABCF3-213ENST00000480539 PCP11498 1178 aaKnown RBP17.9■□□□□ 0.46
ABCF3-213ENST00000480539 VCAM1P19320 739 aa17.9■□□□□ 0.46
ABCF3-213ENST00000480539 LBX1P52954 281 aa17.9■□□□□ 0.46
ABCF3-213ENST00000480539 KIAA1755Q5JYT7 1200 aa17.9■□□□□ 0.46
ABCF3-213ENST00000480539 LRRC47Q8N1G4 583 aaKnown RBP17.9■□□□□ 0.46
ABCF3-213ENST00000480539 C12orf42Q96LP6 360 aa17.9■□□□□ 0.46
ABCF3-213ENST00000480539 PARK7Q99497 189 aaKnown RBP17.9■□□□□ 0.46
ABCF3-213ENST00000480539 ZCCHC17Q9NP64 241 aaKnown RBP17.9■□□□□ 0.46
ABCF3-213ENST00000480539 MTMR4Q9NYA4 1195 aa17.9■□□□□ 0.46
ABCF3-213ENST00000480539 RAD21O60216 631 aa17.89■□□□□ 0.45
ABCF3-213ENST00000480539 KDM4AO75164 1064 aa17.89■□□□□ 0.45
ABCF3-213ENST00000480539 SPICE1Q8N0Z3 855 aa17.89■□□□□ 0.45
ABCF3-213ENST00000480539 ESR2Q92731 530 aa17.89■□□□□ 0.45
ABCF3-213ENST00000480539 CFHR5Q9BXR6 569 aa17.89■□□□□ 0.45
ABCF3-213ENST00000480539 VCPKMTQ9H867 229 aa17.89■□□□□ 0.45
ABCF3-213ENST00000480539 ZFYVE28Q9HCC9 887 aa17.89■□□□□ 0.45
ABCF3-213ENST00000480539 IL17RBQ9NRM6 502 aa17.89■□□□□ 0.45
ABCF3-213ENST00000480539 NYAP2Q9P242 653 aa17.89■□□□□ 0.45
ABCF3-213ENST00000480539 CLIP2Q9UDT6 1046 aa17.89■□□□□ 0.45
ABCF3-213ENST00000480539 TMX2Q9Y320 296 aa17.89■□□□□ 0.45
ABCF3-213ENST00000480539 MYH4Q9Y623 1939 aa17.89■□□□□ 0.45
ABCF3-213ENST00000480539 SLC27A2O14975 620 aa17.88■□□□□ 0.45
ABCF3-213ENST00000480539 TTLL1O95922 423 aa17.88■□□□□ 0.45
ABCF3-213ENST00000480539 STOX1Q6ZVD7 989 aa17.88■□□□□ 0.45
ABCF3-213ENST00000480539 RPAP3Q9H6T3 665 aaPredicted RBP17.88■□□□□ 0.45
ABCF3-213ENST00000480539 STX8Q9UNK0 236 aa17.88■□□□□ 0.45
ABCF3-213ENST00000480539 SLC45A1Q9Y2W3 748 aa17.88■□□□□ 0.45
ABCF3-213ENST00000480539 ADGRA2Q96PE1 1338 aa17.88■□□□□ 0.45
ABCF3-213ENST00000480539 E7EWF7 191 aa17.87■□□□□ 0.45
ABCF3-213ENST00000480539 IRX3P78415 501 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms