RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 LIMA1Q9UHB6 759 aaKnown RBP11.99□□□□□ -0.49
SIK3-210ENST00000480468 ODF2LQ9ULJ1 636 aa11.99□□□□□ -0.49
SIK3-210ENST00000480468 REXO2Q9Y3B8 237 aaKnown RBP11.99□□□□□ -0.49
SIK3-210ENST00000480468 EPN1Q9Y6I3 576 aaPredicted RBP11.99□□□□□ -0.49
SIK3-210ENST00000480468 MST1RQ04912 1400 aa11.99□□□□□ -0.49
SIK3-210ENST00000480468 MYH8P13535 1937 aa11.99□□□□□ -0.49
SIK3-210ENST00000480468 NEURL1BA8MQ27 555 aa11.98□□□□□ -0.49
SIK3-210ENST00000480468 POLR2DO15514 142 aaKnown RBP11.98□□□□□ -0.49
SIK3-210ENST00000480468 ATP1A1P05023 1023 aaKnown RBP11.98□□□□□ -0.49
SIK3-210ENST00000480468 HDGFP51858 240 aaKnown RBP11.98□□□□□ -0.49
SIK3-210ENST00000480468 ANTXR2P58335 489 aa11.98□□□□□ -0.49
SIK3-210ENST00000480468 CCDC40Q4G0X9 1142 aa11.98□□□□□ -0.49
SIK3-210ENST00000480468 EMBQ6PCB8 327 aa11.98□□□□□ -0.49
SIK3-210ENST00000480468 ZNF572Q7Z3I7 529 aaPredicted RBP11.98□□□□□ -0.49
SIK3-210ENST00000480468 NCOA7Q8NI08 942 aa11.98□□□□□ -0.49
SIK3-210ENST00000480468 EPN3Q9H201 632 aa11.98□□□□□ -0.49
SIK3-210ENST00000480468 CD248Q9HCU0 757 aa11.98□□□□□ -0.49
SIK3-210ENST00000480468 GPR108Q9NPR9 543 aa11.98□□□□□ -0.49
SIK3-210ENST00000480468 FBXO2Q9UK22 296 aaPredicted RBP11.98□□□□□ -0.49
SIK3-210ENST00000480468 NWD2Q9ULI1 1742 aa11.98□□□□□ -0.49
SIK3-210ENST00000480468 GOLIM4O00461 696 aa11.98□□□□□ -0.49
SIK3-210ENST00000480468 SH2B2O14492 632 aaPredicted RBP11.98□□□□□ -0.49
SIK3-210ENST00000480468 NPM1P06748 294 aaKnown RBP eCLIP11.98□□□□□ -0.49
SIK3-210ENST00000480468 APBA1Q02410 837 aa11.98□□□□□ -0.49
SIK3-210ENST00000480468 SPAG1Q07617 926 aa11.98□□□□□ -0.49
SIK3-210ENST00000480468 NEXNQ0ZGT2 675 aa11.98□□□□□ -0.49
SIK3-210ENST00000480468 NNTQ13423 1086 aa11.98□□□□□ -0.49
SIK3-210ENST00000480468 AKAP4Q5JQC9 854 aa11.98□□□□□ -0.49
SIK3-210ENST00000480468 KDM7AQ6ZMT4 941 aa11.98□□□□□ -0.49
SIK3-210ENST00000480468 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.98□□□□□ -0.49
SIK3-210ENST00000480468 IQCA1Q86XH1 822 aa11.98□□□□□ -0.49
SIK3-210ENST00000480468 JAKMIP2Q96AA8 810 aa11.98□□□□□ -0.49
SIK3-210ENST00000480468 FAM212AQ96EL1 285 aa11.98□□□□□ -0.49
SIK3-210ENST00000480468 HDAC6Q9UBN7 1215 aa11.98□□□□□ -0.49
SIK3-210ENST00000480468 KCNG1Q9UIX4 513 aa11.98□□□□□ -0.49
SIK3-210ENST00000480468 TNFRSF8P28908 595 aa11.97□□□□□ -0.49
SIK3-210ENST00000480468 EPHB4P54760 987 aa11.97□□□□□ -0.49
SIK3-210ENST00000480468 IRX1P78414 480 aaPredicted RBP11.97□□□□□ -0.49
SIK3-210ENST00000480468 TRIM29Q14134 588 aa11.97□□□□□ -0.49
SIK3-210ENST00000480468 CEP85LQ5SZL2 805 aa11.97□□□□□ -0.49
SIK3-210ENST00000480468 SND1Q7KZF4 910 aaKnown RBP eCLIP11.97□□□□□ -0.49
SIK3-210ENST00000480468 FNBP4Q8N3X1 1017 aaPredicted RBP11.97□□□□□ -0.49
SIK3-210ENST00000480468 C1orf131Q8NDD1 294 aaKnown RBP11.97□□□□□ -0.49
SIK3-210ENST00000480468 CAVIN3Q969G5 261 aa11.97□□□□□ -0.49
SIK3-210ENST00000480468 GDAP1L1Q96MZ0 367 aa11.97□□□□□ -0.49
SIK3-210ENST00000480468 ACTR5Q9H9F9 607 aaPredicted RBP11.97□□□□□ -0.49
SIK3-210ENST00000480468 GUCA1BQ9UMX6 200 aa11.97□□□□□ -0.49
SIK3-210ENST00000480468 TMEM94Q12767 1356 aa11.97□□□□□ -0.49
SIK3-210ENST00000480468 STK36Q9NRP7 1315 aa11.97□□□□□ -0.49
SIK3-210ENST00000480468 MARF1Q9Y4F3 1742 aaKnown RBP11.97□□□□□ -0.49
SIK3-210ENST00000480468 PIP4K2AP48426 406 aaPredicted RBP11.96□□□□□ -0.49
SIK3-210ENST00000480468 PPP2R5AQ15172 486 aa11.96□□□□□ -0.49
SIK3-210ENST00000480468 TTMPQ5BVD1 217 aa11.96□□□□□ -0.49
SIK3-210ENST00000480468 NAA35Q5VZE5 725 aa11.96□□□□□ -0.49
SIK3-210ENST00000480468 MYO5AQ9Y4I1 1855 aaKnown RBP11.96□□□□□ -0.49
SIK3-210ENST00000480468 ECM29Q5VYK3 1845 aa11.96□□□□□ -0.49
SIK3-210ENST00000480468 ENC1O14682 589 aa11.96□□□□□ -0.49
SIK3-210ENST00000480468 KRT9P35527 623 aa11.96□□□□□ -0.49
SIK3-210ENST00000480468 KRT83P78385 493 aa11.96□□□□□ -0.49
SIK3-210ENST00000480468 PDCLQ13371 301 aa11.96□□□□□ -0.49
SIK3-210ENST00000480468 RALYLQ86SE5 291 aaKnown RBP11.96□□□□□ -0.49
SIK3-210ENST00000480468 NOSTRINQ8IVI9 506 aa11.96□□□□□ -0.49
SIK3-210ENST00000480468 GSPT2Q8IYD1 628 aaKnown RBP11.96□□□□□ -0.49
SIK3-210ENST00000480468 CCDC13Q8IYE1 715 aa11.96□□□□□ -0.49
SIK3-210ENST00000480468 C3orf20Q8ND61 904 aa11.96□□□□□ -0.49
SIK3-210ENST00000480468 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.96□□□□□ -0.49
SIK3-210ENST00000480468 AIFM3Q96NN9 605 aa11.96□□□□□ -0.49
SIK3-210ENST00000480468 GSDMAQ96QA5 445 aa11.96□□□□□ -0.49
SIK3-210ENST00000480468 RUFY1Q96T51 708 aa11.96□□□□□ -0.49
SIK3-210ENST00000480468 NUP88Q99567 741 aaPredicted RBP11.96□□□□□ -0.49
SIK3-210ENST00000480468 SRPRBQ9Y5M8 271 aaKnown RBP11.96□□□□□ -0.49
SIK3-210ENST00000480468 A0A1B0GUA9 196 aa11.95□□□□□ -0.5
SIK3-210ENST00000480468 M0R2C6 588 aa11.95□□□□□ -0.5
SIK3-210ENST00000480468 HSF2BPO75031 334 aa11.95□□□□□ -0.5
SIK3-210ENST00000480468 ZMYND10O75800 440 aa11.95□□□□□ -0.5
SIK3-210ENST00000480468 LSP1P33241 339 aa11.95□□□□□ -0.5
SIK3-210ENST00000480468 METAP2P50579 478 aaKnown RBP eCLIP11.95□□□□□ -0.5
SIK3-210ENST00000480468 CDR1P51861 262 aa11.95□□□□□ -0.5
SIK3-210ENST00000480468 KRT31Q15323 416 aa11.95□□□□□ -0.5
SIK3-210ENST00000480468 RILPL1Q5EBL4 403 aa11.95□□□□□ -0.5
SIK3-210ENST00000480468 C6orf89Q6UWU4 347 aa11.95□□□□□ -0.5
SIK3-210ENST00000480468 SH3RF1Q7Z6J0 888 aa11.95□□□□□ -0.5
SIK3-210ENST00000480468 TAX1BP1Q86VP1 789 aa11.95□□□□□ -0.5
SIK3-210ENST00000480468 CAGE1Q8TC20 777 aa11.95□□□□□ -0.5
SIK3-210ENST00000480468 DIP2BQ9P265 1576 aa11.95□□□□□ -0.5
SIK3-210ENST00000480468 GOLGA6L7A0A1B0GV03 622 aa11.95□□□□□ -0.5
SIK3-210ENST00000480468 PPP1R3GB7ZBB8 358 aa11.95□□□□□ -0.5
SIK3-210ENST00000480468 N4BP3O15049 544 aa11.95□□□□□ -0.5
SIK3-210ENST00000480468 FOXP2O15409 715 aa11.95□□□□□ -0.5
SIK3-210ENST00000480468 KRT86O43790 486 aa11.95□□□□□ -0.5
SIK3-210ENST00000480468 RTN2O75298 545 aa11.95□□□□□ -0.5
SIK3-210ENST00000480468 CD44P16070 742 aaKnown RBP11.95□□□□□ -0.5
SIK3-210ENST00000480468 SNCBQ16143 134 aa11.95□□□□□ -0.5
SIK3-210ENST00000480468 WASHC4Q2M389 1173 aa11.95□□□□□ -0.5
SIK3-210ENST00000480468 NBPF20Q3BBV1 942 aa11.95□□□□□ -0.5
SIK3-210ENST00000480468 CCDC122Q5T0U0 273 aa11.95□□□□□ -0.5
SIK3-210ENST00000480468 RIC3Q7Z5B4 369 aa11.95□□□□□ -0.5
SIK3-210ENST00000480468 ZNF473Q8WTR7 871 aaKnown RBP11.95□□□□□ -0.5
SIK3-210ENST00000480468 ARL8AQ96BM9 186 aa11.95□□□□□ -0.5
SIK3-210ENST00000480468 DNAJC7Q99615 494 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms