RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 NT5C2P49902 561 aa12.22□□□□□ -0.45
LINC00173-203ENST00000480237 METAP2P50579 478 aaKnown RBP eCLIP12.22□□□□□ -0.45
LINC00173-203ENST00000480237 APOA5Q6Q788 366 aa12.22□□□□□ -0.45
LINC00173-203ENST00000480237 SYNE3Q6ZMZ3 975 aa12.22□□□□□ -0.45
LINC00173-203ENST00000480237 SGMS1Q86VZ5 419 aa12.22□□□□□ -0.45
LINC00173-203ENST00000480237 MICU3Q86XE3 530 aa12.22□□□□□ -0.45
LINC00173-203ENST00000480237 OGFOD1Q8N543 542 aa12.22□□□□□ -0.45
LINC00173-203ENST00000480237 AGBL3Q8NEM8 1001 aa12.22□□□□□ -0.45
LINC00173-203ENST00000480237 IGDCC4Q8TDY8 1250 aa12.22□□□□□ -0.45
LINC00173-203ENST00000480237 GBP4Q96PP9 640 aa12.22□□□□□ -0.45
LINC00173-203ENST00000480237 LLPHQ9BRT6 129 aaKnown RBP12.22□□□□□ -0.45
LINC00173-203ENST00000480237 OSBPL5Q9H0X9 879 aaPredicted RBP12.22□□□□□ -0.45
LINC00173-203ENST00000480237 DDX4Q9NQI0 724 aaKnown RBP12.22□□□□□ -0.45
LINC00173-203ENST00000480237 WDR33Q9C0J8 1336 aaKnown RBP12.21□□□□□ -0.45
LINC00173-203ENST00000480237 GOLGA8AA7E2F4 631 aa12.21□□□□□ -0.46
LINC00173-203ENST00000480237 CPLX1O14810 134 aa12.21□□□□□ -0.46
LINC00173-203ENST00000480237 DHX16O60231 1041 aaKnown RBP12.21□□□□□ -0.46
LINC00173-203ENST00000480237 JAK2O60674 1132 aa12.21□□□□□ -0.46
LINC00173-203ENST00000480237 DTNBO60941 627 aa12.21□□□□□ -0.46
LINC00173-203ENST00000480237 HLA-DOAP06340 250 aa12.21□□□□□ -0.46
LINC00173-203ENST00000480237 HOXB1P14653 301 aaPredicted RBP12.21□□□□□ -0.46
LINC00173-203ENST00000480237 PDCP20941 246 aa12.21□□□□□ -0.46
LINC00173-203ENST00000480237 PLCD1P51178 756 aa12.21□□□□□ -0.46
LINC00173-203ENST00000480237 CXCL9Q07325 125 aa12.21□□□□□ -0.46
LINC00173-203ENST00000480237 TNIP1Q15025 636 aa12.21□□□□□ -0.46
LINC00173-203ENST00000480237 FAM47AQ5JRC9 791 aa12.21□□□□□ -0.46
LINC00173-203ENST00000480237 C16orf86Q6ZW13 317 aa12.21□□□□□ -0.46
LINC00173-203ENST00000480237 TTC6Q86TZ1 520 aa12.21□□□□□ -0.46
LINC00173-203ENST00000480237 ZSCAN10Q96SZ4 725 aaPredicted RBP12.21□□□□□ -0.46
LINC00173-203ENST00000480237 SENP2Q9HC62 589 aa12.21□□□□□ -0.46
LINC00173-203ENST00000480237 TMOD2Q9NZR1 351 aa12.21□□□□□ -0.46
LINC00173-203ENST00000480237 KIF3AQ9Y496 699 aa12.21□□□□□ -0.46
LINC00173-203ENST00000480237 SLC12A7Q9Y666 1083 aa12.21□□□□□ -0.46
LINC00173-203ENST00000480237 NID2Q14112 1375 aa12.21□□□□□ -0.46
LINC00173-203ENST00000480237 PTPDC1A2A3K4 754 aa12.2□□□□□ -0.46
LINC00173-203ENST00000480237 VPS37CA5D8V6 355 aaPredicted RBP12.2□□□□□ -0.46
LINC00173-203ENST00000480237 TSPY3P0CV98 308 aa12.2□□□□□ -0.46
LINC00173-203ENST00000480237 TSPY8P0CW00 308 aa12.2□□□□□ -0.46
LINC00173-203ENST00000480237 CACNB3P54284 484 aa12.2□□□□□ -0.46
LINC00173-203ENST00000480237 HMGN5P82970 282 aaKnown RBP12.2□□□□□ -0.46
LINC00173-203ENST00000480237 IFIT1BQ5T764 474 aaKnown RBP12.2□□□□□ -0.46
LINC00173-203ENST00000480237 FOXD4L5Q5VV16 416 aaPredicted RBP12.2□□□□□ -0.46
LINC00173-203ENST00000480237 TMTC2Q8N394 836 aa12.2□□□□□ -0.46
LINC00173-203ENST00000480237 ENAHQ8N8S7 591 aaPredicted RBP12.2□□□□□ -0.46
LINC00173-203ENST00000480237 FAM184AQ8NB25 1140 aa12.2□□□□□ -0.46
LINC00173-203ENST00000480237 SLC44A5Q8NCS7 719 aa12.2□□□□□ -0.46
LINC00173-203ENST00000480237 NSUN7Q8NE18 718 aaKnown RBP12.2□□□□□ -0.46
LINC00173-203ENST00000480237 FOXD4L4Q8WXT5 416 aaPredicted RBP12.2□□□□□ -0.46
LINC00173-203ENST00000480237 GMLQ99445 158 aa12.2□□□□□ -0.46
LINC00173-203ENST00000480237 HPS5Q9UPZ3 1129 aa12.2□□□□□ -0.46
LINC00173-203ENST00000480237 MYH7BA7E2Y1 1941 aa12.2□□□□□ -0.46
LINC00173-203ENST00000480237 SMCHD1A6NHR9 2005 aa12.2□□□□□ -0.46
LINC00173-203ENST00000480237 WDR90Q96KV7 1748 aa12.19□□□□□ -0.46
LINC00173-203ENST00000480237 COL11A1P12107 1806 aaPredicted RBP12.19□□□□□ -0.46
LINC00173-203ENST00000480237 STX6O43752 255 aa12.19□□□□□ -0.46
LINC00173-203ENST00000480237 EVI5O60447 810 aa12.19□□□□□ -0.46
LINC00173-203ENST00000480237 BRD1O95696 1058 aa12.19□□□□□ -0.46
LINC00173-203ENST00000480237 RXRAP19793 462 aa12.19□□□□□ -0.46
LINC00173-203ENST00000480237 SYT1P21579 422 aa12.19□□□□□ -0.46
LINC00173-203ENST00000480237 CDK8P49336 464 aa12.19□□□□□ -0.46
LINC00173-203ENST00000480237 EIF6P56537 245 aaKnown RBP12.19□□□□□ -0.46
LINC00173-203ENST00000480237 TFAP4Q01664 338 aa12.19□□□□□ -0.46
LINC00173-203ENST00000480237 NFIAQ12857 509 aa12.19□□□□□ -0.46
LINC00173-203ENST00000480237 DLGAP5Q15398 846 aa12.19□□□□□ -0.46
LINC00173-203ENST00000480237 SEC23AQ15436 765 aa12.19□□□□□ -0.46
LINC00173-203ENST00000480237 CPLX2Q6PUV4 134 aaKnown RBP12.19□□□□□ -0.46
LINC00173-203ENST00000480237 CCDC144CPQ8IYA2 1237 aa12.19□□□□□ -0.46
LINC00173-203ENST00000480237 ZNF654Q8IZM8 581 aa12.19□□□□□ -0.46
LINC00173-203ENST00000480237 ZNF444Q8N0Y2 327 aaPredicted RBP12.19□□□□□ -0.46
LINC00173-203ENST00000480237 DDX11Q96FC9 970 aa12.19□□□□□ -0.46
LINC00173-203ENST00000480237 MYL10Q9BUA6 226 aa12.19□□□□□ -0.46
LINC00173-203ENST00000480237 TDRD3Q9H7E2 651 aaKnown RBP12.19□□□□□ -0.46
LINC00173-203ENST00000480237 CDKL5O76039 1030 aa12.18□□□□□ -0.46
LINC00173-203ENST00000480237 RASA1P20936 1047 aa12.18□□□□□ -0.46
LINC00173-203ENST00000480237 TCP10Q12799 353 aa12.18□□□□□ -0.46
LINC00173-203ENST00000480237 RTN1Q16799 776 aa12.18□□□□□ -0.46
LINC00173-203ENST00000480237 LARP1BQ659C4 914 aaKnown RBP12.18□□□□□ -0.46
LINC00173-203ENST00000480237 ARHGAP27Q6ZUM4 889 aa12.18□□□□□ -0.46
LINC00173-203ENST00000480237 ZSCAN29Q8IWY8 852 aaPredicted RBP12.18□□□□□ -0.46
LINC00173-203ENST00000480237 SMARCC2Q8TAQ2 1214 aa12.18□□□□□ -0.46
LINC00173-203ENST00000480237 MARVELD3Q96A59 401 aa12.18□□□□□ -0.46
LINC00173-203ENST00000480237 IDI2Q9BXS1 227 aa12.18□□□□□ -0.46
LINC00173-203ENST00000480237 ZDHHC9Q9Y397 364 aa12.18□□□□□ -0.46
LINC00173-203ENST00000480237 ARIH1Q9Y4X5 557 aaPredicted RBP12.18□□□□□ -0.46
LINC00173-203ENST00000480237 PLIN4Q96Q06 1357 aa12.18□□□□□ -0.46
LINC00173-203ENST00000480237 NMT2O60551 498 aa12.18□□□□□ -0.46
LINC00173-203ENST00000480237 CTDNEP1O95476 244 aa12.18□□□□□ -0.46
LINC00173-203ENST00000480237 CCDC178Q5BJE1 867 aa12.18□□□□□ -0.46
LINC00173-203ENST00000480237 CATIPQ7Z7H3 387 aa12.18□□□□□ -0.46
LINC00173-203ENST00000480237 CRACR2BQ8N4Y2 399 aaPredicted RBP12.18□□□□□ -0.46
LINC00173-203ENST00000480237 NUP133Q8WUM0 1156 aa12.18□□□□□ -0.46
LINC00173-203ENST00000480237 PRMT6Q96LA8 375 aaPredicted RBP12.18□□□□□ -0.46
LINC00173-203ENST00000480237 TRIM34Q9BYJ4 488 aa12.18□□□□□ -0.46
LINC00173-203ENST00000480237 SWAP70Q9UH65 585 aa12.18□□□□□ -0.46
LINC00173-203ENST00000480237 SERPINB13Q9UIV8 391 aa12.18□□□□□ -0.46
LINC00173-203ENST00000480237 GJA3Q9Y6H8 435 aa12.18□□□□□ -0.46
LINC00173-203ENST00000480237 ATRNL1Q5VV63 1379 aa12.17□□□□□ -0.46
LINC00173-203ENST00000480237 DDX11L8A8MPP1 907 aa12.17□□□□□ -0.46
LINC00173-203ENST00000480237 GOLGA6L22H0YM25 854 aa12.17□□□□□ -0.46
LINC00173-203ENST00000480237 ZSCAN22P10073 491 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms