RNA–Protein interactions for RNA: ENST00000480181.1

CLIC3-202, Transcript of chloride intracellular channel 3, humanhuman

TSL 3

Gene CLIC3, Length 794 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-202ENST00000480181 CABP5Q9NP86 173 aa25.22■■□□□ 1.63
CLIC3-202ENST00000480181 DDX60LQ5H9U9 1706 aaKnown RBP25.21■■□□□ 1.63
CLIC3-202ENST00000480181 DYNLL1P63167 89 aaKnown RBP25.21■■□□□ 1.63
CLIC3-202ENST00000480181 ERC1Q8IUD2 1116 aa25.21■■□□□ 1.63
CLIC3-202ENST00000480181 LAMA3Q16787 3333 aa25.2■■□□□ 1.63
CLIC3-202ENST00000480181 SOX1O00570 391 aaPredicted RBP25.2■■□□□ 1.62
CLIC3-202ENST00000480181 LRIT3Q3SXY7 679 aa25.2■■□□□ 1.62
CLIC3-202ENST00000480181 CERKLQ49MI3 558 aaPredicted RBP25.2■■□□□ 1.62
CLIC3-202ENST00000480181 MFSD14CQ5VZR4 134 aa25.2■■□□□ 1.62
CLIC3-202ENST00000480181 MAGEB6Q8N7X4 407 aa25.2■■□□□ 1.62
CLIC3-202ENST00000480181 PANK1Q8TE04 598 aa25.2■■□□□ 1.62
CLIC3-202ENST00000480181 EDC3Q96F86 508 aaKnown RBP25.2■■□□□ 1.62
CLIC3-202ENST00000480181 LRCH3Q96II8 777 aa25.2■■□□□ 1.62
CLIC3-202ENST00000480181 CCDC8Q9H0W5 538 aaPredicted RBP25.2■■□□□ 1.62
CLIC3-202ENST00000480181 PORCNQ9H237 461 aa25.2■■□□□ 1.62
CLIC3-202ENST00000480181 MAP2K5Q13163 448 aa25.19■■□□□ 1.62
CLIC3-202ENST00000480181 RAB3GAP1Q15042 981 aa25.19■■□□□ 1.62
CLIC3-202ENST00000480181 ABCB5Q2M3G0 1257 aa25.19■■□□□ 1.62
CLIC3-202ENST00000480181 ITPRIPQ8IWB1 547 aa25.19■■□□□ 1.62
CLIC3-202ENST00000480181 TDHQ8IZJ6 230 aa25.19■■□□□ 1.62
CLIC3-202ENST00000480181 MIGA1Q8NAN2 632 aa25.19■■□□□ 1.62
CLIC3-202ENST00000480181 KIAA1683Q9H0B3 1180 aa25.19■■□□□ 1.62
CLIC3-202ENST00000480181 IVNS1ABPQ9Y6Y0 642 aa25.19■■□□□ 1.62
CLIC3-202ENST00000480181 SLC15A5A6NIM6 579 aa25.18■■□□□ 1.62
CLIC3-202ENST00000480181 MSCO60682 206 aa25.18■■□□□ 1.62
CLIC3-202ENST00000480181 MAGEA10P43363 369 aaPredicted RBP25.18■■□□□ 1.62
CLIC3-202ENST00000480181 SHROOM1Q2M3G4 852 aaPredicted RBP25.18■■□□□ 1.62
CLIC3-202ENST00000480181 LBX2Q6XYB7 198 aa25.18■■□□□ 1.62
CLIC3-202ENST00000480181 CATSPERGQ6ZRH7 1159 aa25.18■■□□□ 1.62
CLIC3-202ENST00000480181 EAF2Q96CJ1 260 aaPredicted RBP25.18■■□□□ 1.62
CLIC3-202ENST00000480181 MYH1P12882 1939 aa25.18■■□□□ 1.62
CLIC3-202ENST00000480181 PEX10O60683 326 aa25.17■■□□□ 1.62
CLIC3-202ENST00000480181 COL6A1P12109 1028 aa25.17■■□□□ 1.62
CLIC3-202ENST00000480181 TTF1Q15361 905 aaPredicted RBP25.17■■□□□ 1.62
CLIC3-202ENST00000480181 LHX8Q68G74 356 aa25.17■■□□□ 1.62
CLIC3-202ENST00000480181 UBE2OQ9C0C9 1292 aaKnown RBP25.17■■□□□ 1.62
CLIC3-202ENST00000480181 C1orf115Q9H7X2 142 aa25.17■■□□□ 1.62
CLIC3-202ENST00000480181 PFASO15067 1338 aa25.16■■□□□ 1.62
CLIC3-202ENST00000480181 SYN1P17600 705 aa25.16■■□□□ 1.62
CLIC3-202ENST00000480181 ZYXQ15942 572 aaKnown RBP25.16■■□□□ 1.62
CLIC3-202ENST00000480181 HSP90AB4PQ58FF6 505 aa25.16■■□□□ 1.62
CLIC3-202ENST00000480181 TLR7Q9NYK1 1049 aaKnown RBP25.16■■□□□ 1.62
CLIC3-202ENST00000480181 MYO5AQ9Y4I1 1855 aaKnown RBP25.15■■□□□ 1.62
CLIC3-202ENST00000480181 CCND3P30281 292 aaPredicted RBP25.15■■□□□ 1.62
CLIC3-202ENST00000480181 WDR78Q5VTH9 848 aa25.15■■□□□ 1.62
CLIC3-202ENST00000480181 POLR3DP05423 398 aaPredicted RBP25.14■■□□□ 1.62
CLIC3-202ENST00000480181 VCAM1P19320 739 aa25.14■■□□□ 1.62
CLIC3-202ENST00000480181 PTPREP23469 700 aa25.14■■□□□ 1.62
CLIC3-202ENST00000480181 ATP2B2Q01814 1243 aa25.14■■□□□ 1.62
CLIC3-202ENST00000480181 CCL14Q16627 93 aa25.14■■□□□ 1.62
CLIC3-202ENST00000480181 CNMDO75829 334 aa25.13■■□□□ 1.61
CLIC3-202ENST00000480181 HOXC6P09630 235 aa25.13■■□□□ 1.61
CLIC3-202ENST00000480181 DEFB123Q8N688 67 aa25.13■■□□□ 1.61
CLIC3-202ENST00000480181 MAGEB6P1A0A0J9YX57 407 aa25.12■■□□□ 1.61
CLIC3-202ENST00000480181 DLL1O00548 723 aa25.12■■□□□ 1.61
CLIC3-202ENST00000480181 MS4A1P11836 297 aa25.12■■□□□ 1.61
CLIC3-202ENST00000480181 C20orf194Q5TEA3 1177 aa25.12■■□□□ 1.61
CLIC3-202ENST00000480181 AACSQ86V21 672 aa25.12■■□□□ 1.61
CLIC3-202ENST00000480181 CRNKL1Q9BZJ0 848 aaKnown RBP25.12■■□□□ 1.61
CLIC3-202ENST00000480181 HOXC10Q9NYD6 342 aa25.12■■□□□ 1.61
CLIC3-202ENST00000480181 GRB14Q14449 540 aa25.11■■□□□ 1.61
CLIC3-202ENST00000480181 POTEEQ6S8J3 1075 aa25.11■■□□□ 1.61
CLIC3-202ENST00000480181 RPAP3Q9H6T3 665 aaPredicted RBP25.11■■□□□ 1.61
CLIC3-202ENST00000480181 DDX20Q9UHI6 824 aaKnown RBP25.11■■□□□ 1.61
CLIC3-202ENST00000480181 STRNO43815 780 aa25.1■■□□□ 1.61
CLIC3-202ENST00000480181 SHMT1P34896 483 aa25.1■■□□□ 1.61
CLIC3-202ENST00000480181 LRRC26Q2I0M4 334 aa25.1■■□□□ 1.61
CLIC3-202ENST00000480181 CEP85Q6P2H3 762 aa25.1■■□□□ 1.61
CLIC3-202ENST00000480181 ACER1Q8TDN7 264 aa25.1■■□□□ 1.61
CLIC3-202ENST00000480181 LPAR1Q92633 364 aa25.1■■□□□ 1.61
CLIC3-202ENST00000480181 RIOK1Q9BRS2 568 aaKnown RBP25.1■■□□□ 1.61
CLIC3-202ENST00000480181 ANTXR1Q9H6X2 564 aa25.1■■□□□ 1.61
CLIC3-202ENST00000480181 COL6A3P12111 3177 aa25.09■■□□□ 1.61
CLIC3-202ENST00000480181 SPDYE16A6NNV3 312 aaPredicted RBP25.09■■□□□ 1.61
CLIC3-202ENST00000480181 CNGA1P29973 690 aa25.09■■□□□ 1.61
CLIC3-202ENST00000480181 PLCD1P51178 756 aa25.09■■□□□ 1.61
CLIC3-202ENST00000480181 COG2Q14746 738 aa25.09■■□□□ 1.61
CLIC3-202ENST00000480181 LBHD1Q9BQE6 289 aaPredicted RBP25.09■■□□□ 1.61
CLIC3-202ENST00000480181 SLC5A4Q9NY91 659 aa25.09■■□□□ 1.61
CLIC3-202ENST00000480181 SLC9C2Q5TAH2 1124 aa25.08■■□□□ 1.61
CLIC3-202ENST00000480181 DPP9Q86TI2 863 aa25.08■■□□□ 1.61
CLIC3-202ENST00000480181 MB21D1Q8N884 522 aa25.08■■□□□ 1.61
CLIC3-202ENST00000480181 SENP6Q9GZR1 1112 aaPredicted RBP25.08■■□□□ 1.61
CLIC3-202ENST00000480181 MCM9Q9NXL9 1143 aa25.08■■□□□ 1.61
CLIC3-202ENST00000480181 BTBD7Q9P203 1132 aa25.08■■□□□ 1.61
CLIC3-202ENST00000480181 PRKAG2Q9UGJ0 569 aa25.08■■□□□ 1.61
CLIC3-202ENST00000480181 EXOC6BQ9Y2D4 811 aa25.08■■□□□ 1.61
CLIC3-202ENST00000480181 STXBP5LQ9Y2K9 1186 aa25.08■■□□□ 1.61
CLIC3-202ENST00000480181 COG6Q9Y2V7 657 aa25.08■■□□□ 1.61
CLIC3-202ENST00000480181 DNM1LO00429 736 aa25.07■■□□□ 1.6
CLIC3-202ENST00000480181 MPHOSPH10O00566 681 aaKnown RBP25.07■■□□□ 1.6
CLIC3-202ENST00000480181 GABPAQ06546 454 aa25.07■■□□□ 1.6
CLIC3-202ENST00000480181 CLASRPQ8N2M8 674 aaKnown RBP25.07■■□□□ 1.6
CLIC3-202ENST00000480181 ARRDC4Q8NCT1 418 aa25.07■■□□□ 1.6
CLIC3-202ENST00000480181 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.07■■□□□ 1.6
CLIC3-202ENST00000480181 SWAP70Q9UH65 585 aa25.07■■□□□ 1.6
CLIC3-202ENST00000480181 NDUFB9Q9Y6M9 179 aa25.07■■□□□ 1.6
CLIC3-202ENST00000480181 SEPT2Q15019 361 aa25.06■■□□□ 1.6
CLIC3-202ENST00000480181 OLFML2BQ68BL8 750 aa25.06■■□□□ 1.6
CLIC3-202ENST00000480181 SHCBP1Q8NEM2 672 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms