RNA–Protein interactions for RNA: ENST00000479994.1

HCLS1-206, Transcript of hematopoietic cell-specific Lyn substrate 1, human

TSL 3

Gene HCLS1, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCLS1-206	ENST00000479994	NR2E3	Q9Y5X4	410 aa		13.61	□□□□□ -0.23
HCLS1-206	ENST00000479994		E7EWF7	191 aa		13.6	□□□□□ -0.23
HCLS1-206	ENST00000479994	ST18	O60284	1047 aa		13.6	□□□□□ -0.23
HCLS1-206	ENST00000479994	FGR	P09769	529 aa		13.6	□□□□□ -0.23
HCLS1-206	ENST00000479994	NFIA	Q12857	509 aa		13.6	□□□□□ -0.23
HCLS1-206	ENST00000479994	RASA3	Q14644	834 aa		13.6	□□□□□ -0.23
HCLS1-206	ENST00000479994	C16orf86	Q6ZW13	317 aa		13.6	□□□□□ -0.23
HCLS1-206	ENST00000479994	SHISA4	Q96DD7	197 aa		13.6	□□□□□ -0.23
HCLS1-206	ENST00000479994	CCDC17	Q96LX7	622 aa		13.6	□□□□□ -0.23
HCLS1-206	ENST00000479994	NEK1	Q96PY6	1258 aa		13.6	□□□□□ -0.23
HCLS1-206	ENST00000479994	DDX4	Q9NQI0	724 aa	Known RBP	13.6	□□□□□ -0.23
HCLS1-206	ENST00000479994	SNX14	Q9Y5W7	946 aa		13.6	□□□□□ -0.23
HCLS1-206	ENST00000479994	CYP46A1	Q9Y6A2	500 aa		13.6	□□□□□ -0.23
HCLS1-206	ENST00000479994	PTCH2	Q9Y6C5	1203 aa		13.6	□□□□□ -0.23
HCLS1-206	ENST00000479994	MCM5	P33992	734 aa		13.59	□□□□□ -0.23
HCLS1-206	ENST00000479994	MCM2	P49736	904 aa		13.59	□□□□□ -0.23
HCLS1-206	ENST00000479994	TCP10	Q12799	353 aa		13.59	□□□□□ -0.23
HCLS1-206	ENST00000479994	ANKRD1	Q15327	319 aa		13.59	□□□□□ -0.23
HCLS1-206	ENST00000479994	BLOC1S2	Q6QNY1	142 aa		13.59	□□□□□ -0.23
HCLS1-206	ENST00000479994	IQCA1	Q86XH1	822 aa		13.59	□□□□□ -0.23
HCLS1-206	ENST00000479994	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.59	□□□□□ -0.23
HCLS1-206	ENST00000479994	CHMP4C	Q96CF2	233 aa		13.59	□□□□□ -0.23
HCLS1-206	ENST00000479994	SAP30BP	Q9UHR5	308 aa	Known RBP	13.59	□□□□□ -0.23
HCLS1-206	ENST00000479994	PALD1	Q9ULE6	856 aa		13.59	□□□□□ -0.23
HCLS1-206	ENST00000479994	PRUNE2	Q8WUY3	3088 aa		13.59	□□□□□ -0.23
HCLS1-206	ENST00000479994	DOCK1	Q14185	1865 aa		13.59	□□□□□ -0.23
HCLS1-206	ENST00000479994	MYH4	Q9Y623	1939 aa		13.58	□□□□□ -0.23
HCLS1-206	ENST00000479994	ERICH2	A1L162	156 aa		13.58	□□□□□ -0.24
HCLS1-206	ENST00000479994	UNCX	A6NJT0	531 aa		13.58	□□□□□ -0.24
HCLS1-206	ENST00000479994	CACNB3	P54284	484 aa		13.58	□□□□□ -0.24
HCLS1-206	ENST00000479994	HAND2	P61296	217 aa		13.58	□□□□□ -0.24
HCLS1-206	ENST00000479994	IFNL1	Q8IU54	200 aa		13.58	□□□□□ -0.24
HCLS1-206	ENST00000479994	TMTC2	Q8N394	836 aa		13.58	□□□□□ -0.24
HCLS1-206	ENST00000479994	TMEM87B	Q96K49	555 aa		13.58	□□□□□ -0.24
HCLS1-206	ENST00000479994	HTATIP2	Q9BUP3	242 aa		13.58	□□□□□ -0.24
HCLS1-206	ENST00000479994	PCDHAC2	Q9Y5I4	1007 aa		13.58	□□□□□ -0.24
HCLS1-206	ENST00000479994	GREB1L	Q9C091	1923 aa	Predicted RBP	13.58	□□□□□ -0.24
HCLS1-206	ENST00000479994	CAST	P20810	708 aa	Known RBP	13.57	□□□□□ -0.24
HCLS1-206	ENST00000479994	MAP3K10	Q02779	954 aa		13.57	□□□□□ -0.24
HCLS1-206	ENST00000479994	GABPA	Q06546	454 aa		13.57	□□□□□ -0.24
HCLS1-206	ENST00000479994	RUFY3	Q7L099	469 aa		13.57	□□□□□ -0.24
HCLS1-206	ENST00000479994	DHX32	Q7L7V1	743 aa	Known RBP	13.57	□□□□□ -0.24
HCLS1-206	ENST00000479994	UBE2Q1	Q7Z7E8	422 aa		13.57	□□□□□ -0.24
HCLS1-206	ENST00000479994	FBXL16	Q8N461	479 aa		13.57	□□□□□ -0.24
HCLS1-206	ENST00000479994	JAKMIP1	Q96N16	626 aa	Known RBP	13.57	□□□□□ -0.24
HCLS1-206	ENST00000479994	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.57	□□□□□ -0.24
HCLS1-206	ENST00000479994	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
HCLS1-206	ENST00000479994	ZSWIM6	Q9HCJ5	1215 aa		13.57	□□□□□ -0.24
HCLS1-206	ENST00000479994	TOMM22	Q9NS69	142 aa		13.57	□□□□□ -0.24
HCLS1-206	ENST00000479994	PLIN4	Q96Q06	1357 aa		13.57	□□□□□ -0.24
HCLS1-206	ENST00000479994	LAMA2	P24043	3122 aa	Known RBP	13.56	□□□□□ -0.24
HCLS1-206	ENST00000479994	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
HCLS1-206	ENST00000479994	PPP1R12B	O60237	982 aa	Predicted RBP	13.56	□□□□□ -0.24
HCLS1-206	ENST00000479994	CDK8	P49336	464 aa		13.56	□□□□□ -0.24
HCLS1-206	ENST00000479994	PLCD1	P51178	756 aa		13.56	□□□□□ -0.24
HCLS1-206	ENST00000479994	FGD1	P98174	961 aa		13.56	□□□□□ -0.24
HCLS1-206	ENST00000479994	CTDSPL2	Q05D32	466 aa		13.56	□□□□□ -0.24
HCLS1-206	ENST00000479994	TTLL12	Q14166	644 aa	Predicted RBP	13.56	□□□□□ -0.24
HCLS1-206	ENST00000479994	SPRYD7	Q5W111	196 aa		13.56	□□□□□ -0.24
HCLS1-206	ENST00000479994	TATDN1	Q6P1N9	297 aa		13.56	□□□□□ -0.24
HCLS1-206	ENST00000479994	UBAC1	Q9BSL1	405 aa		13.56	□□□□□ -0.24
HCLS1-206	ENST00000479994	ZNF341	Q9BYN7	854 aa		13.56	□□□□□ -0.24
HCLS1-206	ENST00000479994	TBC1D2	Q9BYX2	928 aa		13.56	□□□□□ -0.24
HCLS1-206	ENST00000479994	CABP5	Q9NP86	173 aa		13.56	□□□□□ -0.24
HCLS1-206	ENST00000479994	SCAF8	Q9UPN6	1271 aa	Known RBP	13.56	□□□□□ -0.24
HCLS1-206	ENST00000479994	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
HCLS1-206	ENST00000479994	DDTL	A6NHG4	134 aa	Predicted RBP	13.55	□□□□□ -0.24
HCLS1-206	ENST00000479994	TSPY2	A6NKD2	308 aa		13.55	□□□□□ -0.24
HCLS1-206	ENST00000479994	RANBP6	O60518	1105 aa	Known RBP	13.55	□□□□□ -0.24
HCLS1-206	ENST00000479994	TSPY3	P0CV98	308 aa		13.55	□□□□□ -0.24
HCLS1-206	ENST00000479994	TSPY8	P0CW00	308 aa		13.55	□□□□□ -0.24
HCLS1-206	ENST00000479994	RPS6KB1	P23443	525 aa		13.55	□□□□□ -0.24
HCLS1-206	ENST00000479994	ANP32A	P39687	249 aa	Known RBP	13.55	□□□□□ -0.24
HCLS1-206	ENST00000479994	SP3	Q02447	781 aa		13.55	□□□□□ -0.24
HCLS1-206	ENST00000479994	CERKL	Q49MI3	558 aa	Predicted RBP	13.55	□□□□□ -0.24
HCLS1-206	ENST00000479994	PRAMEF18	Q5VWM3	479 aa		13.55	□□□□□ -0.24
HCLS1-206	ENST00000479994	TBC1D10C	Q8IV04	446 aa		13.55	□□□□□ -0.24
HCLS1-206	ENST00000479994	RASEF	Q8IZ41	740 aa		13.55	□□□□□ -0.24
HCLS1-206	ENST00000479994	SH3TC2	Q8TF17	1288 aa		13.55	□□□□□ -0.24
HCLS1-206	ENST00000479994	TEPSIN	Q96N21	525 aa		13.55	□□□□□ -0.24
HCLS1-206	ENST00000479994	TTC14	Q96N46	770 aa		13.55	□□□□□ -0.24
HCLS1-206	ENST00000479994	TMEM39B	Q9GZU3	492 aa		13.55	□□□□□ -0.24
HCLS1-206	ENST00000479994	TCP11L1	Q9NUJ3	509 aa		13.55	□□□□□ -0.24
HCLS1-206	ENST00000479994	SYNPO2	Q9UMS6	1093 aa		13.55	□□□□□ -0.24
HCLS1-206	ENST00000479994	RPTOR	Q8N122	1335 aa		13.55	□□□□□ -0.24
HCLS1-206	ENST00000479994	CRHR2	Q13324	411 aa		13.54	□□□□□ -0.24
HCLS1-206	ENST00000479994	RRP12	Q5JTH9	1297 aa	Known RBP	13.54	□□□□□ -0.24
HCLS1-206	ENST00000479994	TMEM179	Q6ZVK1	233 aa		13.54	□□□□□ -0.24
HCLS1-206	ENST00000479994	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.54	□□□□□ -0.24
HCLS1-206	ENST00000479994	NBPF3	Q9H094	633 aa		13.54	□□□□□ -0.24
HCLS1-206	ENST00000479994	CYP2D7	A0A087X1C5	515 aa		13.53	□□□□□ -0.24
HCLS1-206	ENST00000479994	CTNND1	O60716	968 aa	Known RBP	13.53	□□□□□ -0.24
HCLS1-206	ENST00000479994	KDM4A	O75164	1064 aa		13.53	□□□□□ -0.24
HCLS1-206	ENST00000479994	ASNS	P08243	561 aa		13.53	□□□□□ -0.24
HCLS1-206	ENST00000479994	CYP2D6	P10635	497 aa		13.53	□□□□□ -0.24
HCLS1-206	ENST00000479994	RASA1	P20936	1047 aa		13.53	□□□□□ -0.24
HCLS1-206	ENST00000479994	LIFR	P42702	1097 aa		13.53	□□□□□ -0.24
HCLS1-206	ENST00000479994	IREB2	P48200	963 aa	Known RBP	13.53	□□□□□ -0.24
HCLS1-206	ENST00000479994	NEK4	P51957	841 aa		13.53	□□□□□ -0.24
HCLS1-206	ENST00000479994	INHBE	P58166	350 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms