RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 CCDC138Q96M89 665 aa9.9□□□□□ -0.82
TTC3-216ENST00000479930 SMYD2Q9NRG4 433 aa9.9□□□□□ -0.82
TTC3-216ENST00000479930 EXOC7Q9UPT5 735 aa9.9□□□□□ -0.82
TTC3-216ENST00000479930 KRT87PA6NCN2 255 aa9.9□□□□□ -0.82
TTC3-216ENST00000479930 FOSP01100 380 aaPredicted RBP9.9□□□□□ -0.82
TTC3-216ENST00000479930 LDHBP07195 334 aaKnown RBP9.9□□□□□ -0.82
TTC3-216ENST00000479930 UBXN2AP68543 259 aa9.9□□□□□ -0.82
TTC3-216ENST00000479930 ODR4Q5SWX8 454 aa9.9□□□□□ -0.82
TTC3-216ENST00000479930 MAGEB6P1A0A0J9YX57 407 aa9.9□□□□□ -0.82
TTC3-216ENST00000479930 RARSP54136 660 aaKnown RBP9.9□□□□□ -0.82
TTC3-216ENST00000479930 MCM9Q9NXL9 1143 aa9.9□□□□□ -0.82
TTC3-216ENST00000479930 FAM47E-STBD1D6RA91 191 aa9.9□□□□□ -0.83
TTC3-216ENST00000479930 NBPF7P0C2Y1 421 aaPredicted RBP9.9□□□□□ -0.83
TTC3-216ENST00000479930 CCT4P50991 539 aaKnown RBP9.9□□□□□ -0.83
TTC3-216ENST00000479930 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.9□□□□□ -0.834e-6■■■■■ 45.1
TTC3-216ENST00000479930 POLR3EQ9NVU0 708 aa9.9□□□□□ -0.83
TTC3-216ENST00000479930 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.9□□□□□ -0.833e-10■□□□□ 8.4
TTC3-216ENST00000479930 COG7P83436 770 aa9.9□□□□□ -0.83
TTC3-216ENST00000479930 CNBD1Q8NA66 436 aa9.9□□□□□ -0.83
TTC3-216ENST00000479930 DDX17Q92841 729 aaKnown RBP9.9□□□□□ -0.83
TTC3-216ENST00000479930 INPP5FQ9Y2H2 1132 aa9.9□□□□□ -0.83
TTC3-216ENST00000479930 POLR1AO95602 1720 aaPredicted RBP9.9□□□□□ -0.83
TTC3-216ENST00000479930 TLDC2A0PJX2 215 aa9.89□□□□□ -0.83
TTC3-216ENST00000479930 TMOD1P28289 359 aa9.89□□□□□ -0.83
TTC3-216ENST00000479930 ADALQ6DHV7 355 aa9.89□□□□□ -0.83
TTC3-216ENST00000479930 IFT20Q8IY31 132 aa9.89□□□□□ -0.83
TTC3-216ENST00000479930 DEPTORQ8TB45 409 aa9.89□□□□□ -0.83
TTC3-216ENST00000479930 RABEP2Q9H5N1 569 aa9.89□□□□□ -0.83
TTC3-216ENST00000479930 GNAT3A8MTJ3 354 aa9.89□□□□□ -0.83
TTC3-216ENST00000479930 ZFYP08048 801 aaPredicted RBP9.89□□□□□ -0.83
TTC3-216ENST00000479930 MX2P20592 715 aa9.89□□□□□ -0.83
TTC3-216ENST00000479930 KPNA1P52294 538 aaPredicted RBP9.89□□□□□ -0.83
TTC3-216ENST00000479930 MICU3Q86XE3 530 aa9.89□□□□□ -0.83
TTC3-216ENST00000479930 BBOF1Q8ND07 529 aa9.89□□□□□ -0.83
TTC3-216ENST00000479930 DIS3LQ8TF46 1054 aaKnown RBP9.89□□□□□ -0.83
TTC3-216ENST00000479930 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.89□□□□□ -0.83
TTC3-216ENST00000479930 HGSO14964 777 aaPredicted RBP9.89□□□□□ -0.83
TTC3-216ENST00000479930 SPTLC2O15270 562 aa9.89□□□□□ -0.83
TTC3-216ENST00000479930 PPFIA4O75335 1185 aa9.89□□□□□ -0.83
TTC3-216ENST00000479930 CCT7Q99832 543 aa9.89□□□□□ -0.83
TTC3-216ENST00000479930 UPP2O95045 317 aa9.89□□□□□ -0.83
TTC3-216ENST00000479930 KRT7P08729 469 aa9.89□□□□□ -0.83
TTC3-216ENST00000479930 KRT17Q04695 432 aa9.89□□□□□ -0.83
TTC3-216ENST00000479930 PPP2R3AQ06190 1150 aa9.89□□□□□ -0.83
TTC3-216ENST00000479930 CACNA2D3Q8IZS8 1091 aa9.89□□□□□ -0.83
TTC3-216ENST00000479930 SPDL1Q96EA4 605 aa9.89□□□□□ -0.83
TTC3-216ENST00000479930 SENP1Q9P0U3 644 aa9.89□□□□□ -0.83
TTC3-216ENST00000479930 FAM160A1Q05DH4 1040 aa9.89□□□□□ -0.83
TTC3-216ENST00000479930 NLRP9Q7RTR0 991 aa9.89□□□□□ -0.83
TTC3-216ENST00000479930 ZFP91Q96JP5 570 aaPredicted RBP9.89□□□□□ -0.83
TTC3-216ENST00000479930 TSR3Q9UJK0 312 aaKnown RBP9.89□□□□□ -0.83
TTC3-216ENST00000479930 ATAD2Q6PL18 1390 aa9.89□□□□□ -0.83
TTC3-216ENST00000479930 AKT1P31749 480 aa9.89□□□□□ -0.83
TTC3-216ENST00000479930 KRT79Q5XKE5 535 aa9.89□□□□□ -0.83
TTC3-216ENST00000479930 ANKS3Q6ZW76 656 aa9.89□□□□□ -0.83
TTC3-216ENST00000479930 AKAP7Q9P0M2 348 aaPredicted RBP9.89□□□□□ -0.83
TTC3-216ENST00000479930 TRPC5Q9UL62 973 aaPredicted RBP9.89□□□□□ -0.83
TTC3-216ENST00000479930 MSH6P52701 1360 aa9.89□□□□□ -0.83
TTC3-216ENST00000479930 ECE1P42892 770 aa9.89□□□□□ -0.83
TTC3-216ENST00000479930 XAB2Q9HCS7 855 aaKnown RBP9.89□□□□□ -0.83
TTC3-216ENST00000479930 CAVIN2O95810 425 aa9.88□□□□□ -0.83
TTC3-216ENST00000479930 SNW1Q13573 536 aaKnown RBP9.88□□□□□ -0.83
TTC3-216ENST00000479930 KRT27Q7Z3Y8 459 aa9.88□□□□□ -0.83
TTC3-216ENST00000479930 ARHGEF35A5YM69 484 aa9.88□□□□□ -0.83
TTC3-216ENST00000479930 PRR23AA6NEV1 266 aa9.88□□□□□ -0.83
TTC3-216ENST00000479930 COLEC12Q5KU26 742 aa9.88□□□□□ -0.83
TTC3-216ENST00000479930 STMN4Q9H169 189 aaPredicted RBP9.88□□□□□ -0.83
TTC3-216ENST00000479930 KRT82Q9NSB4 513 aa9.88□□□□□ -0.83
TTC3-216ENST00000479930 GOLGA8FQ08AF8 430 aa9.88□□□□□ -0.83
TTC3-216ENST00000479930 GOLGA8DPQ0D2H9 430 aa9.88□□□□□ -0.83
TTC3-216ENST00000479930 SDCCAG3Q96C92 435 aa9.88□□□□□ -0.83
TTC3-216ENST00000479930 TRIM45Q9H8W5 580 aaPredicted RBP9.88□□□□□ -0.83
TTC3-216ENST00000479930 IQANK1A0A1B0GTG1 560 aa9.88□□□□□ -0.83
TTC3-216ENST00000479930 RAB44Q7Z6P3 723 aaPredicted RBP9.88□□□□□ -0.83
TTC3-216ENST00000479930 COA7Q96BR5 231 aa9.88□□□□□ -0.83
TTC3-216ENST00000479930 SPOPO43791 374 aa9.88□□□□□ -0.83
TTC3-216ENST00000479930 PRMT3O60678 531 aa9.88□□□□□ -0.83
TTC3-216ENST00000479930 KCTD2Q14681 263 aa9.88□□□□□ -0.83
TTC3-216ENST00000479930 TTC23Q5W5X9 447 aa9.88□□□□□ -0.83
TTC3-216ENST00000479930 NCAPH2Q6IBW4 605 aa9.88□□□□□ -0.83
TTC3-216ENST00000479930 TTC23LQ6PF05 361 aa9.88□□□□□ -0.83
TTC3-216ENST00000479930 LMBR1Q8WVP7 490 aa9.88□□□□□ -0.83
TTC3-216ENST00000479930 PTGS1P23219 599 aa9.88□□□□□ -0.83
TTC3-216ENST00000479930 LIG3P49916 1009 aa9.88□□□□□ -0.83
TTC3-216ENST00000479930 TTC14Q96N46 770 aa9.88□□□□□ -0.83
TTC3-216ENST00000479930 CSRNP2Q9H175 543 aa9.88□□□□□ -0.83
TTC3-216ENST00000479930 CAPN7Q9Y6W3 813 aa9.88□□□□□ -0.83
TTC3-216ENST00000479930 PLCG2P16885 1265 aa9.88□□□□□ -0.83
TTC3-216ENST00000479930 FAM98CQ17RN3 349 aaKnown RBP9.88□□□□□ -0.83
TTC3-216ENST00000479930 MTERF2Q49AM1 385 aa9.88□□□□□ -0.83
TTC3-216ENST00000479930 TEX11Q8IYF3 940 aa9.88□□□□□ -0.83
TTC3-216ENST00000479930 PDCD6IPQ8WUM4 868 aaKnown RBP9.88□□□□□ -0.83
TTC3-216ENST00000479930 EPAS1Q99814 870 aa9.88□□□□□ -0.83
TTC3-216ENST00000479930 SMCO2A6NFE2 343 aa9.87□□□□□ -0.83
TTC3-216ENST00000479930 CREB3O43889 395 aa9.87□□□□□ -0.83
TTC3-216ENST00000479930 IARSP41252 1262 aaKnown RBP9.87□□□□□ -0.83
TTC3-216ENST00000479930 WTAPQ15007 396 aa9.87□□□□□ -0.83
TTC3-216ENST00000479930 CCDC24Q8N4L8 307 aa9.87□□□□□ -0.83
TTC3-216ENST00000479930 GRPEL1Q9HAV7 217 aa9.87□□□□□ -0.83
TTC3-216ENST00000479930 AATFQ9NY61 560 aaKnown RBP eCLIP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms