RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 WASF1Q92558 559 aa23.45■■□□□ 1.34
COL13A1-208ENST00000479733 PAGE5Q96GU1 130 aa23.45■■□□□ 1.34
COL13A1-208ENST00000479733 CHP1Q99653 195 aa23.45■■□□□ 1.34
COL13A1-208ENST00000479733 MAPK8IP1Q9UQF2 711 aa23.45■■□□□ 1.34
COL13A1-208ENST00000479733 MAGEA9P43362 315 aa23.44■■□□□ 1.34
COL13A1-208ENST00000479733 LDHAL6AQ6ZMR3 332 aa23.44■■□□□ 1.34
COL13A1-208ENST00000479733 SGMS1Q86VZ5 419 aa23.44■■□□□ 1.34
COL13A1-208ENST00000479733 SPATA20Q8TB22 786 aa23.44■■□□□ 1.34
COL13A1-208ENST00000479733 CCDC148Q8NFR7 591 aa23.44■■□□□ 1.34
COL13A1-208ENST00000479733 NAPBQ9H115 298 aa23.44■■□□□ 1.34
COL13A1-208ENST00000479733 RABEP2Q9H5N1 569 aa23.44■■□□□ 1.34
COL13A1-208ENST00000479733 ABHD10Q9NUJ1 306 aa23.44■■□□□ 1.34
COL13A1-208ENST00000479733 KRT9P35527 623 aa23.43■■□□□ 1.34
COL13A1-208ENST00000479733 KRT31Q15323 416 aa23.43■■□□□ 1.34
COL13A1-208ENST00000479733 CDKAL1Q5VV42 579 aa23.43■■□□□ 1.34
COL13A1-208ENST00000479733 GSPT2Q8IYD1 628 aaKnown RBP23.43■■□□□ 1.34
COL13A1-208ENST00000479733 CTAGE1Q96RT6 745 aa23.43■■□□□ 1.34
COL13A1-208ENST00000479733 PES1O00541 588 aaKnown RBP23.43■■□□□ 1.34
COL13A1-208ENST00000479733 PDE6AP16499 860 aa23.43■■□□□ 1.34
COL13A1-208ENST00000479733 TMTC1Q8IUR5 882 aa23.43■■□□□ 1.34
COL13A1-208ENST00000479733 SYMPKQ92797 1274 aaKnown RBP23.43■■□□□ 1.34
COL13A1-208ENST00000479733 FOXP1Q9H334 677 aaPredicted RBP23.43■■□□□ 1.34
COL13A1-208ENST00000479733 ACBD3Q9H3P7 528 aa23.43■■□□□ 1.34
COL13A1-208ENST00000479733 STRN4Q9NRL3 753 aa23.43■■□□□ 1.34
COL13A1-208ENST00000479733 DDX17Q92841 729 aaKnown RBP23.43■■□□□ 1.34
COL13A1-208ENST00000479733 PPP1R3GB7ZBB8 358 aa23.42■■□□□ 1.34
COL13A1-208ENST00000479733 TUBB2AQ13885 445 aa23.42■■□□□ 1.34
COL13A1-208ENST00000479733 TUBB2BQ9BVA1 445 aa23.42■■□□□ 1.34
COL13A1-208ENST00000479733 EARS2Q5JPH6 523 aaKnown RBP23.42■■□□□ 1.34
COL13A1-208ENST00000479733 ZNF579Q8NAF0 562 aaKnown RBP23.42■■□□□ 1.34
COL13A1-208ENST00000479733 AFAP1L1Q8TED9 768 aa23.42■■□□□ 1.34
COL13A1-208ENST00000479733 CNNM1Q9NRU3 951 aa23.42■■□□□ 1.34
COL13A1-208ENST00000479733 MKRN1Q9UHC7 482 aaKnown RBP23.42■■□□□ 1.34
COL13A1-208ENST00000479733 IRX3P78415 501 aaPredicted RBP23.41■■□□□ 1.34
COL13A1-208ENST00000479733 CYP26C1Q6V0L0 522 aa23.41■■□□□ 1.34
COL13A1-208ENST00000479733 STRBPQ96SI9 672 aaKnown RBP23.41■■□□□ 1.34
COL13A1-208ENST00000479733 VPS54Q9P1Q0 977 aa23.41■■□□□ 1.34
COL13A1-208ENST00000479733 CEP131Q9UPN4 1083 aa23.41■■□□□ 1.34
COL13A1-208ENST00000479733 SYF2O95926 243 aaKnown RBP23.41■■□□□ 1.34
COL13A1-208ENST00000479733 RRAGBQ5VZM2 374 aa23.41■■□□□ 1.34
COL13A1-208ENST00000479733 ICE2Q659A1 982 aa23.41■■□□□ 1.34
COL13A1-208ENST00000479733 MMS19Q96T76 1030 aa23.41■■□□□ 1.34
COL13A1-208ENST00000479733 ARMT1Q9H993 441 aa23.41■■□□□ 1.34
COL13A1-208ENST00000479733 EPB41L4AQ9HCS5 686 aaPredicted RBP23.41■■□□□ 1.34
COL13A1-208ENST00000479733 MED4Q9NPJ6 270 aa23.41■■□□□ 1.34
COL13A1-208ENST00000479733 PRKAB2O43741 272 aa23.4■■□□□ 1.34
COL13A1-208ENST00000479733 RPS6KA5O75582 802 aa23.4■■□□□ 1.34
COL13A1-208ENST00000479733 PRDM1O75626 825 aa23.4■■□□□ 1.34
COL13A1-208ENST00000479733 LIFRP42702 1097 aa23.4■■□□□ 1.34
COL13A1-208ENST00000479733 PHKA1P46020 1223 aa23.4■■□□□ 1.34
COL13A1-208ENST00000479733 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.4■■□□□ 1.34
COL13A1-208ENST00000479733 IFNL3Q8IZI9 196 aa23.4■■□□□ 1.34
COL13A1-208ENST00000479733 TBC1D2BQ9UPU7 963 aa23.4■■□□□ 1.34
COL13A1-208ENST00000479733 TRIM75PA6NK02 468 aa23.4■■□□□ 1.34
COL13A1-208ENST00000479733 WNT7AO00755 349 aa23.4■■□□□ 1.34
COL13A1-208ENST00000479733 WTAPQ15007 396 aa23.4■■□□□ 1.34
COL13A1-208ENST00000479733 CRACR2BQ8N4Y2 399 aaPredicted RBP23.4■■□□□ 1.34
COL13A1-208ENST00000479733 HELBQ8NG08 1087 aaPredicted RBP23.4■■□□□ 1.34
COL13A1-208ENST00000479733 DRC1Q96MC2 740 aa23.4■■□□□ 1.34
COL13A1-208ENST00000479733 JRKLQ9Y4A0 524 aa23.4■■□□□ 1.34
COL13A1-208ENST00000479733 MBD4O95243 580 aa23.39■■□□□ 1.34
COL13A1-208ENST00000479733 AMPD2Q01433 879 aa23.39■■□□□ 1.34
COL13A1-208ENST00000479733 ZNF174Q15697 407 aa23.39■■□□□ 1.34
COL13A1-208ENST00000479733 MFSD6Q6ZSS7 791 aa23.39■■□□□ 1.34
COL13A1-208ENST00000479733 STK36Q9NRP7 1315 aa23.39■■□□□ 1.34
COL13A1-208ENST00000479733 RGPD5Q99666 1765 aa23.39■■□□□ 1.33
COL13A1-208ENST00000479733 SLIT3O75094 1523 aa23.39■■□□□ 1.33
COL13A1-208ENST00000479733 TUBB4BP68371 445 aa23.39■■□□□ 1.33
COL13A1-208ENST00000479733 DEXIO95424 95 aa23.38■■□□□ 1.33
COL13A1-208ENST00000479733 ATP1A1P05023 1023 aaKnown RBP23.38■■□□□ 1.33
COL13A1-208ENST00000479733 GPTP24298 496 aa23.38■■□□□ 1.33
COL13A1-208ENST00000479733 CORO7P57737 925 aa23.38■■□□□ 1.33
COL13A1-208ENST00000479733 SMARCC1Q92922 1105 aaPredicted RBP23.38■■□□□ 1.33
COL13A1-208ENST00000479733 MAGEB6Q8N7X4 407 aa23.38■■□□□ 1.33
COL13A1-208ENST00000479733 CCDC51Q96ER9 411 aa23.38■■□□□ 1.33
COL13A1-208ENST00000479733 REXO2Q9Y3B8 237 aaKnown RBP23.38■■□□□ 1.33
COL13A1-208ENST00000479733 EPN1Q9Y6I3 576 aaPredicted RBP23.38■■□□□ 1.33
COL13A1-208ENST00000479733 MAP3K15Q6ZN16 1313 aa23.38■■□□□ 1.33
COL13A1-208ENST00000479733 UBXN1Q04323 297 aa23.37■■□□□ 1.33
COL13A1-208ENST00000479733 UBE3CQ15386 1083 aa23.37■■□□□ 1.33
COL13A1-208ENST00000479733 CTR9Q6PD62 1173 aa23.37■■□□□ 1.33
COL13A1-208ENST00000479733 GREM2Q9H772 168 aa23.37■■□□□ 1.33
COL13A1-208ENST00000479733 SNAP23O00161 211 aa23.37■■□□□ 1.33
COL13A1-208ENST00000479733 GGCXP38435 758 aa23.37■■□□□ 1.33
COL13A1-208ENST00000479733 COPB1P53618 953 aaKnown RBP23.37■■□□□ 1.33
COL13A1-208ENST00000479733 USP14P54578 494 aa23.37■■□□□ 1.33
COL13A1-208ENST00000479733 AKNAD1Q5T1N1 836 aa23.37■■□□□ 1.33
COL13A1-208ENST00000479733 WDR93Q6P2C0 686 aa23.37■■□□□ 1.33
COL13A1-208ENST00000479733 MSL3Q8N5Y2 521 aaKnown RBP23.37■■□□□ 1.33
COL13A1-208ENST00000479733 HPCAL4Q9UM19 191 aa23.37■■□□□ 1.33
COL13A1-208ENST00000479733 MYH8P13535 1937 aa23.37■■□□□ 1.33
COL13A1-208ENST00000479733 SCN11AQ9UI33 1791 aa23.36■■□□□ 1.33
COL13A1-208ENST00000479733 ERICH2A1L162 156 aa23.36■■□□□ 1.33
COL13A1-208ENST00000479733 PPFIA4O75335 1185 aa23.36■■□□□ 1.33
COL13A1-208ENST00000479733 ITGA6P23229 1130 aa23.36■■□□□ 1.33
COL13A1-208ENST00000479733 PPM1EQ8WY54 764 aa23.36■■□□□ 1.33
COL13A1-208ENST00000479733 SHISA4Q96DD7 197 aa23.36■■□□□ 1.33
COL13A1-208ENST00000479733 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.36■■□□□ 1.33
COL13A1-208ENST00000479733 NDUFA10O95299 355 aa23.36■■□□□ 1.33
COL13A1-208ENST00000479733 TDO2P48775 406 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms