RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 U2SURPO15042 1029 aaKnown RBP7.53□□□□□ -1.2
RFC4-212ENST00000479307 RAG1P15918 1043 aa7.53□□□□□ -1.2
RFC4-212ENST00000479307 NKG7Q16617 165 aa7.53□□□□□ -1.2
RFC4-212ENST00000479307 ARSHQ5FYA8 562 aa7.53□□□□□ -1.2
RFC4-212ENST00000479307 XP32Q5T750 250 aa7.53□□□□□ -1.2
RFC4-212ENST00000479307 CD163Q86VB7 1156 aa7.53□□□□□ -1.2
RFC4-212ENST00000479307 FAM20CQ8IXL6 584 aa7.53□□□□□ -1.2
RFC4-212ENST00000479307 HNRNPLLQ8WVV9 542 aaKnown RBP7.53□□□□□ -1.2
RFC4-212ENST00000479307 OSBPL2Q9H1P3 480 aa7.53□□□□□ -1.2
RFC4-212ENST00000479307 SIRPGQ9P1W8 387 aa7.53□□□□□ -1.2
RFC4-212ENST00000479307 DHX15O43143 795 aaKnown RBP7.52□□□□□ -1.21
RFC4-212ENST00000479307 BMP3P12645 472 aa7.52□□□□□ -1.21
RFC4-212ENST00000479307 MAP4P27816 1152 aaKnown RBP7.52□□□□□ -1.21
RFC4-212ENST00000479307 SERINC3Q13530 473 aa7.52□□□□□ -1.21
RFC4-212ENST00000479307 SGO2Q562F6 1265 aa7.52□□□□□ -1.21
RFC4-212ENST00000479307 PRAMEF13Q5VWM6 474 aa7.52□□□□□ -1.21
RFC4-212ENST00000479307 ARMCX6Q7L4S7 300 aa7.52□□□□□ -1.21
RFC4-212ENST00000479307 PHACTR4Q8IZ21 702 aa7.52□□□□□ -1.21
RFC4-212ENST00000479307 ARMC10Q8N2F6 343 aa7.52□□□□□ -1.21
RFC4-212ENST00000479307 CYB5D2Q8WUJ1 264 aa7.52□□□□□ -1.21
RFC4-212ENST00000479307 FBLIM1Q8WUP2 373 aa7.52□□□□□ -1.21
RFC4-212ENST00000479307 MKL1Q969V6 931 aa7.52□□□□□ -1.21
RFC4-212ENST00000479307 CCDC74BQ96LY2 380 aa7.52□□□□□ -1.21
RFC4-212ENST00000479307 SSBP4Q9BWG4 385 aaPredicted RBP7.52□□□□□ -1.21
RFC4-212ENST00000479307 DAGLAQ9Y4D2 1042 aa7.52□□□□□ -1.21
RFC4-212ENST00000479307 DNMBPQ6XZF7 1577 aa7.51□□□□□ -1.21
RFC4-212ENST00000479307 LMTK3Q96Q04 1460 aa7.51□□□□□ -1.21
RFC4-212ENST00000479307 FAM95CA0A1B0GW59 222 aa7.51□□□□□ -1.21
RFC4-212ENST00000479307 C1QTNF9BB2RNN3 333 aa7.51□□□□□ -1.21
RFC4-212ENST00000479307 RGS13O14921 159 aa7.51□□□□□ -1.21
RFC4-212ENST00000479307 NFICP08651 508 aa7.51□□□□□ -1.21
RFC4-212ENST00000479307 RXRBP28702 533 aa7.51□□□□□ -1.21
RFC4-212ENST00000479307 NFE2L2Q16236 605 aa7.51□□□□□ -1.21
RFC4-212ENST00000479307 PPP2R5EQ16537 467 aa7.51□□□□□ -1.21
RFC4-212ENST00000479307 FXNQ16595 210 aa7.51□□□□□ -1.21
RFC4-212ENST00000479307 RUFY4Q6ZNE9 571 aa7.51□□□□□ -1.21
RFC4-212ENST00000479307 UBE3DQ7Z6J8 389 aa7.51□□□□□ -1.21
RFC4-212ENST00000479307 TTC6Q86TZ1 520 aa7.51□□□□□ -1.21
RFC4-212ENST00000479307 WDR97A6NE52 1622 aa7.51□□□□□ -1.21
RFC4-212ENST00000479307 ABCC8Q09428 1581 aa7.5□□□□□ -1.21
RFC4-212ENST00000479307 A0A1W2PQH9 124 aa7.5□□□□□ -1.21
RFC4-212ENST00000479307 UPK3BL1B0FP48 263 aa7.5□□□□□ -1.21
RFC4-212ENST00000479307 UPK3BL2E5RIL1 263 aa7.5□□□□□ -1.21
RFC4-212ENST00000479307 ACRP10323 421 aa7.5□□□□□ -1.21
RFC4-212ENST00000479307 CCDC144BQ3MJ40 725 aa7.5□□□□□ -1.21
RFC4-212ENST00000479307 CLEC10AQ8IUN9 316 aa7.5□□□□□ -1.21
RFC4-212ENST00000479307 FBXO41Q8TF61 875 aa7.5□□□□□ -1.21
RFC4-212ENST00000479307 DHRS1Q96LJ7 313 aa7.5□□□□□ -1.21
RFC4-212ENST00000479307 SLC9A7Q96T83 725 aa7.5□□□□□ -1.21
RFC4-212ENST00000479307 PHAXQ9H814 394 aaKnown RBP7.5□□□□□ -1.21
RFC4-212ENST00000479307 KDM6BO15054 1643 aa7.49□□□□□ -1.21
RFC4-212ENST00000479307 GATA4P43694 442 aa7.49□□□□□ -1.21
RFC4-212ENST00000479307 DDR2Q16832 855 aa7.49□□□□□ -1.21
RFC4-212ENST00000479307 PAOXQ6QHF9 649 aa7.49□□□□□ -1.21
RFC4-212ENST00000479307 SEZ6L2Q6UXD5 910 aa7.49□□□□□ -1.21
RFC4-212ENST00000479307 UNC5AQ6ZN44 842 aa7.49□□□□□ -1.21
RFC4-212ENST00000479307 LRP10Q7Z4F1 713 aa7.49□□□□□ -1.21
RFC4-212ENST00000479307 NOP9Q86U38 636 aaKnown RBP7.49□□□□□ -1.21
RFC4-212ENST00000479307 GIMAP7Q8NHV1 300 aa7.49□□□□□ -1.21
RFC4-212ENST00000479307 PSMG3-AS1Q96PY0 264 aa7.49□□□□□ -1.21
RFC4-212ENST00000479307 DPH2Q9BQC3 489 aaPredicted RBP7.49□□□□□ -1.21
RFC4-212ENST00000479307 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.49□□□□□ -1.21
RFC4-212ENST00000479307 TNKS2Q9H2K2 1166 aa7.49□□□□□ -1.21
RFC4-212ENST00000479307 KCNF1Q9H3M0 494 aa7.49□□□□□ -1.21
RFC4-212ENST00000479307 SNAPC4Q5SXM2 1469 aa7.49□□□□□ -1.21
RFC4-212ENST00000479307 BBS9Q3SYG4 887 aa7.48□□□□□ -1.21
RFC4-212ENST00000479307 ZNF746Q6NUN9 644 aaPredicted RBP7.48□□□□□ -1.21
RFC4-212ENST00000479307 BEND4Q6ZU67 534 aa7.48□□□□□ -1.21
RFC4-212ENST00000479307 FAM83CQ9BQN1 747 aa7.48□□□□□ -1.21
RFC4-212ENST00000479307 ZSWIM4Q9H7M6 989 aa7.48□□□□□ -1.21
RFC4-212ENST00000479307 MAGI1Q96QZ7 1491 aaPredicted RBP7.48□□□□□ -1.21
RFC4-212ENST00000479307 K7ELQ4 463 aaPredicted RBP7.47□□□□□ -1.21
RFC4-212ENST00000479307 GBP1P32455 592 aa7.47□□□□□ -1.21
RFC4-212ENST00000479307 NCAPHQ15003 741 aa7.47□□□□□ -1.21
RFC4-212ENST00000479307 NFKBIBQ15653 356 aa7.47□□□□□ -1.21
RFC4-212ENST00000479307 LARP1BQ659C4 914 aaKnown RBP7.47□□□□□ -1.21
RFC4-212ENST00000479307 KIF2CQ99661 725 aa7.47□□□□□ -1.21
RFC4-212ENST00000479307 MSRB2Q9Y3D2 182 aa7.47□□□□□ -1.21
RFC4-212ENST00000479307 MSTNO14793 375 aa7.46□□□□□ -1.22
RFC4-212ENST00000479307 UBOX5O94941 541 aa7.46□□□□□ -1.22
RFC4-212ENST00000479307 POLR2BP30876 1174 aaKnown RBP7.46□□□□□ -1.22
RFC4-212ENST00000479307 ETV3P41162 512 aa7.46□□□□□ -1.22
RFC4-212ENST00000479307 ZYXQ15942 572 aaKnown RBP7.46□□□□□ -1.22
RFC4-212ENST00000479307 LETMD1Q6P1Q0 360 aa7.46□□□□□ -1.22
RFC4-212ENST00000479307 CELF2-AS1Q8N7Q2 184 aa7.46□□□□□ -1.22
RFC4-212ENST00000479307 SMARCC1Q92922 1105 aaPredicted RBP7.46□□□□□ -1.22
RFC4-212ENST00000479307 COX4I2Q96KJ9 171 aa7.46□□□□□ -1.22
RFC4-212ENST00000479307 MIPEPQ99797 713 aa7.46□□□□□ -1.22
RFC4-212ENST00000479307 CCDC113Q9H0I3 377 aa7.46□□□□□ -1.22
RFC4-212ENST00000479307 PRDM10Q9NQV6 1147 aa7.46□□□□□ -1.22
RFC4-212ENST00000479307 C1GALT1Q9NS00 363 aa7.46□□□□□ -1.22
RFC4-212ENST00000479307 CEP131Q9UPN4 1083 aa7.46□□□□□ -1.22
RFC4-212ENST00000479307 CDK11AQ9UQ88 783 aaPredicted RBP7.46□□□□□ -1.22
RFC4-212ENST00000479307 MAPK8IP1Q9UQF2 711 aa7.46□□□□□ -1.22
RFC4-212ENST00000479307 RAXQ9Y2V3 346 aa7.46□□□□□ -1.22
RFC4-212ENST00000479307 ADGRL1O94910 1474 aa7.45□□□□□ -1.22
RFC4-212ENST00000479307 POLA1P09884 1462 aaPredicted RBP7.45□□□□□ -1.22
RFC4-212ENST00000479307 DYNC1LI2O43237 492 aaPredicted RBP7.45□□□□□ -1.22
RFC4-212ENST00000479307 ADAM23O75077 832 aa7.45□□□□□ -1.22
RFC4-212ENST00000479307 CLEC3AO75596 197 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms