RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 MAPK4P31152 587 aa8.14□□□□□ -1.11
VCP-205ENST00000479300 MCAMP43121 646 aa8.14□□□□□ -1.11
VCP-205ENST00000479300 ATN1P54259 1190 aaPredicted RBP8.14□□□□□ -1.11
VCP-205ENST00000479300 SHHQ15465 462 aa8.14□□□□□ -1.11
VCP-205ENST00000479300 PLEKHH3Q7Z736 793 aa8.14□□□□□ -1.11
VCP-205ENST00000479300 TEX11Q8IYF3 940 aa8.14□□□□□ -1.11
VCP-205ENST00000479300 SPATA5Q8NB90 893 aa8.14□□□□□ -1.11
VCP-205ENST00000479300 SPDYE1Q8NFV5 336 aaPredicted RBP8.14□□□□□ -1.11
VCP-205ENST00000479300 APBA2Q99767 749 aa8.14□□□□□ -1.11
VCP-205ENST00000479300 PAGR1Q9BTK6 254 aa8.14□□□□□ -1.11
VCP-205ENST00000479300 TBC1D2Q9BYX2 928 aa8.14□□□□□ -1.11
VCP-205ENST00000479300 TTYH1Q9H313 450 aaPredicted RBP8.14□□□□□ -1.11
VCP-205ENST00000479300 HERC5Q9UII4 1024 aaKnown RBP8.14□□□□□ -1.11
VCP-205ENST00000479300 NOP58Q9Y2X3 529 aaKnown RBP8.14□□□□□ -1.11
VCP-205ENST00000479300 MYO5AQ9Y4I1 1855 aaKnown RBP8.13□□□□□ -1.11
VCP-205ENST00000479300 FLT1P17948 1338 aa8.13□□□□□ -1.11
VCP-205ENST00000479300 TRIM27P14373 513 aa8.13□□□□□ -1.11
VCP-205ENST00000479300 ARID4AP29374 1257 aaPredicted RBP8.13□□□□□ -1.11
VCP-205ENST00000479300 RGS2P41220 211 aa8.13□□□□□ -1.11
VCP-205ENST00000479300 RTP1P59025 263 aa8.13□□□□□ -1.11
VCP-205ENST00000479300 MAP2K5Q13163 448 aa8.13□□□□□ -1.11
VCP-205ENST00000479300 MAPKAPK5Q8IW41 473 aa8.13□□□□□ -1.11
VCP-205ENST00000479300 HS6ST3Q8IZP7 471 aa8.13□□□□□ -1.11
VCP-205ENST00000479300 NPLOC4Q8TAT6 608 aa8.13□□□□□ -1.11
VCP-205ENST00000479300 NOL10Q9BSC4 688 aaKnown RBP8.13□□□□□ -1.11
VCP-205ENST00000479300 SENP6Q9GZR1 1112 aaPredicted RBP8.13□□□□□ -1.11
VCP-205ENST00000479300 SEMA6BQ9H3T3 888 aa8.13□□□□□ -1.11
VCP-205ENST00000479300 AS3MTQ9HBK9 375 aa8.13□□□□□ -1.11
VCP-205ENST00000479300 PALD1Q9ULE6 856 aa8.13□□□□□ -1.11
VCP-205ENST00000479300 ZBTB21Q9ULJ3 1066 aa8.13□□□□□ -1.11
VCP-205ENST00000479300 CHD9Q3L8U1 2897 aa8.12□□□□□ -1.11
VCP-205ENST00000479300 USP17L10C9JJH3 530 aa8.12□□□□□ -1.11
VCP-205ENST00000479300 MAP4K4O95819 1239 aaPredicted RBP8.12□□□□□ -1.11
VCP-205ENST00000479300 LDHCP07864 332 aa8.12□□□□□ -1.11
VCP-205ENST00000479300 ASNSP08243 561 aa8.12□□□□□ -1.11
VCP-205ENST00000479300 UQCRFS1P1P0C7P4 283 aa8.12□□□□□ -1.11
VCP-205ENST00000479300 CYP2C19P33261 490 aa8.12□□□□□ -1.11
VCP-205ENST00000479300 GSTO1P78417 241 aa8.12□□□□□ -1.11
VCP-205ENST00000479300 MTX1Q13505 466 aa8.12□□□□□ -1.11
VCP-205ENST00000479300 PDE3AQ14432 1141 aa8.12□□□□□ -1.11
VCP-205ENST00000479300 SH3RF1Q7Z6J0 888 aa8.12□□□□□ -1.11
VCP-205ENST00000479300 ITPRIPQ8IWB1 547 aa8.12□□□□□ -1.11
VCP-205ENST00000479300 TRMT44Q8IYL2 757 aaKnown RBP8.12□□□□□ -1.11
VCP-205ENST00000479300 RASEFQ8IZ41 740 aa8.12□□□□□ -1.11
VCP-205ENST00000479300 MAFAQ8NHW3 353 aaPredicted RBP8.12□□□□□ -1.11
VCP-205ENST00000479300 TGFBRAP1Q8WUH2 860 aa8.12□□□□□ -1.11
VCP-205ENST00000479300 MYLIPQ8WY64 445 aa8.12□□□□□ -1.11
VCP-205ENST00000479300 PRDM6Q9NQX0 595 aa8.12□□□□□ -1.11
VCP-205ENST00000479300 SNRKQ9NRH2 765 aa8.12□□□□□ -1.11
VCP-205ENST00000479300 AATFQ9NY61 560 aaKnown RBP eCLIP8.12□□□□□ -1.11
VCP-205ENST00000479300 TMOD4Q9NZQ9 345 aa8.12□□□□□ -1.11
VCP-205ENST00000479300 RAI14Q9P0K7 980 aa8.12□□□□□ -1.11
VCP-205ENST00000479300 BTBD7Q9P203 1132 aa8.12□□□□□ -1.11
VCP-205ENST00000479300 PI4KBQ9UBF8 816 aa8.12□□□□□ -1.11
VCP-205ENST00000479300 DDX20Q9UHI6 824 aaKnown RBP8.12□□□□□ -1.11
VCP-205ENST00000479300 TRIM43BA6NCK2 446 aa8.11□□□□□ -1.11
VCP-205ENST00000479300 SLC15A5A6NIM6 579 aa8.11□□□□□ -1.11
VCP-205ENST00000479300 C19orf81C9J6K1 198 aa8.11□□□□□ -1.11
VCP-205ENST00000479300 GH2P01242 217 aa8.11□□□□□ -1.11
VCP-205ENST00000479300 HOXC6P09630 235 aa8.11□□□□□ -1.11
VCP-205ENST00000479300 CYBAP13498 195 aa8.11□□□□□ -1.11
VCP-205ENST00000479300 PTPREP23469 700 aa8.11□□□□□ -1.11
VCP-205ENST00000479300 ITGB8P26012 769 aa8.11□□□□□ -1.11
VCP-205ENST00000479300 EPHB4P54760 987 aa8.11□□□□□ -1.11
VCP-205ENST00000479300 PPP4CP60510 307 aa8.11□□□□□ -1.11
VCP-205ENST00000479300 DYNLL1P63167 89 aaKnown RBP8.11□□□□□ -1.11
VCP-205ENST00000479300 GRB14Q14449 540 aa8.11□□□□□ -1.11
VCP-205ENST00000479300 CCDC158Q5M9N0 1113 aa8.11□□□□□ -1.11
VCP-205ENST00000479300 TTC39AQ5SRH9 613 aa8.11□□□□□ -1.11
VCP-205ENST00000479300 ZNF697Q5TEC3 545 aa8.11□□□□□ -1.11
VCP-205ENST00000479300 TMEM57Q8N5G2 664 aa8.11□□□□□ -1.11
VCP-205ENST00000479300 USP38Q8NB14 1042 aa8.11□□□□□ -1.11
VCP-205ENST00000479300 SPRYD3Q8NCJ5 442 aa8.11□□□□□ -1.11
VCP-205ENST00000479300 ACER1Q8TDN7 264 aa8.11□□□□□ -1.11
VCP-205ENST00000479300 LPAR1Q92633 364 aa8.11□□□□□ -1.11
VCP-205ENST00000479300 TRIM43Q96BQ3 446 aaPredicted RBP8.11□□□□□ -1.11
VCP-205ENST00000479300 EDC3Q96F86 508 aaKnown RBP8.11□□□□□ -1.11
VCP-205ENST00000479300 C12orf42Q96LP6 360 aa8.11□□□□□ -1.11
VCP-205ENST00000479300 LBHD1Q9BQE6 289 aaPredicted RBP8.11□□□□□ -1.11
VCP-205ENST00000479300 SAP30BPQ9UHR5 308 aaKnown RBP8.11□□□□□ -1.11
VCP-205ENST00000479300 TNNQ9UQP3 1299 aa8.11□□□□□ -1.11
VCP-205ENST00000479300 RABGAP1Q9Y3P9 1069 aa8.11□□□□□ -1.11
VCP-205ENST00000479300 ZNF236Q9UL36 1845 aa8.1□□□□□ -1.11
VCP-205ENST00000479300 ZBED9Q6R2W3 1325 aa8.1□□□□□ -1.11
VCP-205ENST00000479300 A0A0G2JMZ2 1700 aa8.1□□□□□ -1.11
VCP-205ENST00000479300 PNMA6EA0A0J9YXQ4 647 aa8.1□□□□□ -1.11
VCP-205ENST00000479300 DNM1LO00429 736 aa8.1□□□□□ -1.11
VCP-205ENST00000479300 SURF6O75683 361 aaKnown RBP8.1□□□□□ -1.11
VCP-205ENST00000479300 CYP2E1P05181 493 aaPredicted RBP8.1□□□□□ -1.11
VCP-205ENST00000479300 EVX2Q03828 476 aa8.1□□□□□ -1.11
VCP-205ENST00000479300 SNX17Q15036 470 aa8.1□□□□□ -1.11
VCP-205ENST00000479300 ZYXQ15942 572 aaKnown RBP8.1□□□□□ -1.11
VCP-205ENST00000479300 TRIM60Q495X7 471 aa8.1□□□□□ -1.11
VCP-205ENST00000479300 GJC2Q5T442 439 aaPredicted RBP8.1□□□□□ -1.11
VCP-205ENST00000479300 ANO1Q5XXA6 986 aa8.1□□□□□ -1.11
VCP-205ENST00000479300 USP17L2Q6R6M4 530 aa8.1□□□□□ -1.11
VCP-205ENST00000479300 SLC39A5Q6ZMH5 540 aa8.1□□□□□ -1.11
VCP-205ENST00000479300 BADQ92934 168 aa8.1□□□□□ -1.11
VCP-205ENST00000479300 DHX36Q9H2U1 1008 aaKnown RBP8.1□□□□□ -1.11
VCP-205ENST00000479300 CHMP4BQ9H444 224 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms