RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 ERC2O15083 957 aa15.37■□□□□ 0.05
HDAC8-217ENST00000478743 IFIT1P09914 478 aaKnown RBP15.37■□□□□ 0.05
HDAC8-217ENST00000478743 NBPF7P0C2Y1 421 aaPredicted RBP15.37■□□□□ 0.05
HDAC8-217ENST00000478743 CALD1Q05682 793 aaKnown RBP15.37■□□□□ 0.05
HDAC8-217ENST00000478743 SKIV2LQ15477 1246 aaKnown RBP15.37■□□□□ 0.05
HDAC8-217ENST00000478743 ANKS1AQ92625 1134 aa15.37■□□□□ 0.05
HDAC8-217ENST00000478743 PHOX2BQ99453 314 aa15.37■□□□□ 0.05
HDAC8-217ENST00000478743 CHMP4AQ9BY43 222 aa15.37■□□□□ 0.05
HDAC8-217ENST00000478743 TBC1D2Q9BYX2 928 aa15.37■□□□□ 0.05
HDAC8-217ENST00000478743 TMEM39AQ9NV64 488 aa15.37■□□□□ 0.05
HDAC8-217ENST00000478743 TMOD4Q9NZQ9 345 aa15.37■□□□□ 0.05
HDAC8-217ENST00000478743 BTBD7Q9P203 1132 aa15.37■□□□□ 0.05
HDAC8-217ENST00000478743 PHF24Q9UPV7 400 aa15.37■□□□□ 0.05
HDAC8-217ENST00000478743 COL4A4P53420 1690 aaPredicted RBP15.36■□□□□ 0.05
HDAC8-217ENST00000478743 RFXAPO00287 272 aa15.36■□□□□ 0.05
HDAC8-217ENST00000478743 SEPT4O43236 478 aa15.36■□□□□ 0.05
HDAC8-217ENST00000478743 LENG1Q96BZ8 264 aaPredicted RBP15.36■□□□□ 0.05
HDAC8-217ENST00000478743 DNAJC18Q9H819 358 aa15.36■□□□□ 0.05
HDAC8-217ENST00000478743 AS3MTQ9HBK9 375 aa15.36■□□□□ 0.05
HDAC8-217ENST00000478743 EMILIN3Q9NT22 766 aa15.36■□□□□ 0.05
HDAC8-217ENST00000478743 C9orf78Q9NZ63 289 aaPredicted RBP15.36■□□□□ 0.05
HDAC8-217ENST00000478743 USP34Q70CQ2 3546 aa15.35■□□□□ 0.05
HDAC8-217ENST00000478743 A0A1W2PQ45 241 aaPredicted RBP15.35■□□□□ 0.05
HDAC8-217ENST00000478743 A0A1W2PQY0 241 aa15.35■□□□□ 0.05
HDAC8-217ENST00000478743 PI4K2BG5E9Z4 385 aa15.35■□□□□ 0.05
HDAC8-217ENST00000478743 MYOGP15173 224 aa15.35■□□□□ 0.05
HDAC8-217ENST00000478743 PHKA1P46020 1223 aa15.35■□□□□ 0.05
HDAC8-217ENST00000478743 RABL6Q3YEC7 729 aaPredicted RBP15.35■□□□□ 0.05
HDAC8-217ENST00000478743 TSPYL2Q9H2G4 693 aaPredicted RBP15.35■□□□□ 0.05
HDAC8-217ENST00000478743 MROH7-TTC4A0A0A0MT08 1334 aa15.35■□□□□ 0.05
HDAC8-217ENST00000478743 GDF11O95390 407 aa15.34■□□□□ 0.05
HDAC8-217ENST00000478743 SLC5A1P13866 664 aa15.34■□□□□ 0.05
HDAC8-217ENST00000478743 CSF2RAP15509 400 aa15.34■□□□□ 0.05
HDAC8-217ENST00000478743 RABGGTBP53611 331 aa15.34■□□□□ 0.05
HDAC8-217ENST00000478743 ZNF365Q70YC5 407 aa15.34■□□□□ 0.05
HDAC8-217ENST00000478743 SLC44A5Q8NCS7 719 aa15.34■□□□□ 0.05
HDAC8-217ENST00000478743 FBXL18Q96ME1 805 aa15.34■□□□□ 0.05
HDAC8-217ENST00000478743 TBX21Q9UL17 535 aa15.34■□□□□ 0.05
HDAC8-217ENST00000478743 EPOPA6NHQ4 379 aa15.33■□□□□ 0.04
HDAC8-217ENST00000478743 PGK1P00558 417 aa15.33■□□□□ 0.04
HDAC8-217ENST00000478743 TIMP1P01033 207 aa15.33■□□□□ 0.04
HDAC8-217ENST00000478743 AAK1Q2M2I8 961 aa15.33■□□□□ 0.04
HDAC8-217ENST00000478743 RABGAP1Q9Y3P9 1069 aa15.33■□□□□ 0.04
HDAC8-217ENST00000478743 FOCADQ5VW36 1801 aa15.32■□□□□ 0.04
HDAC8-217ENST00000478743 PRR33A8MZF0 331 aa15.32■□□□□ 0.04
HDAC8-217ENST00000478743 USP17L10C9JJH3 530 aa15.32■□□□□ 0.04
HDAC8-217ENST00000478743 COBLO75128 1261 aa15.32■□□□□ 0.04
HDAC8-217ENST00000478743 ADORA2AP29274 412 aa15.32■□□□□ 0.04
HDAC8-217ENST00000478743 RALBP1Q15311 655 aa15.32■□□□□ 0.04
HDAC8-217ENST00000478743 ZYXQ15942 572 aaKnown RBP15.32■□□□□ 0.04
HDAC8-217ENST00000478743 MFSD5Q6N075 450 aa15.32■□□□□ 0.04
HDAC8-217ENST00000478743 DZIP1Q86YF9 867 aaKnown RBP15.32■□□□□ 0.04
HDAC8-217ENST00000478743 LPIN2Q92539 896 aa15.32■□□□□ 0.04
HDAC8-217ENST00000478743 SLC28A3Q9HAS3 691 aa15.32■□□□□ 0.04
HDAC8-217ENST00000478743 GLRX3O76003 335 aaKnown RBP15.31■□□□□ 0.04
HDAC8-217ENST00000478743 RAB30Q15771 203 aa15.31■□□□□ 0.04
HDAC8-217ENST00000478743 OLFML2BQ68BL8 750 aa15.31■□□□□ 0.04
HDAC8-217ENST00000478743 ANKRD33Q7Z3H0 272 aa15.31■□□□□ 0.04
HDAC8-217ENST00000478743 GTF3C2Q8WUA4 911 aaPredicted RBP15.31■□□□□ 0.04
HDAC8-217ENST00000478743 FAM163AQ96GL9 167 aaPredicted RBP15.31■□□□□ 0.04
HDAC8-217ENST00000478743 UIMC1Q96RL1 719 aa15.31■□□□□ 0.04
HDAC8-217ENST00000478743 XPNPEP3Q9NQH7 507 aa15.31■□□□□ 0.04
HDAC8-217ENST00000478743 MSRAQ9UJ68 235 aa15.31■□□□□ 0.04
HDAC8-217ENST00000478743 MTCH2Q9Y6C9 303 aa15.31■□□□□ 0.04
HDAC8-217ENST00000478743 CFAP54Q96N23 3096 aa15.3■□□□□ 0.04
HDAC8-217ENST00000478743 GPR75-ASB3A0A0A6YYF3 556 aa15.3■□□□□ 0.04
HDAC8-217ENST00000478743 C19orf81C9J6K1 198 aa15.3■□□□□ 0.04
HDAC8-217ENST00000478743 ADORA1P30542 326 aa15.3■□□□□ 0.04
HDAC8-217ENST00000478743 IRX5P78411 483 aaPredicted RBP15.3■□□□□ 0.04
HDAC8-217ENST00000478743 PPIGQ13427 754 aaKnown RBP eCLIP15.3■□□□□ 0.04
HDAC8-217ENST00000478743 SLC4A10Q6U841 1118 aa15.3■□□□□ 0.04
HDAC8-217ENST00000478743 HERVK_113Q902F9 699 aa15.3■□□□□ 0.04
HDAC8-217ENST00000478743 PPP1R12CQ9BZL4 782 aa15.3■□□□□ 0.04
HDAC8-217ENST00000478743 ABCF2Q9UG63 623 aa15.3■□□□□ 0.04
HDAC8-217ENST00000478743 ZBTB21Q9ULJ3 1066 aa15.3■□□□□ 0.04
HDAC8-217ENST00000478743 IVNS1ABPQ9Y6Y0 642 aa15.3■□□□□ 0.04
HDAC8-217ENST00000478743 ZNF318Q5VUA4 2279 aa15.29■□□□□ 0.04
HDAC8-217ENST00000478743 ZNFX1Q9P2E3 1918 aaKnown RBP15.29■□□□□ 0.04
HDAC8-217ENST00000478743 SPDYE16A6NNV3 312 aaPredicted RBP15.29■□□□□ 0.04
HDAC8-217ENST00000478743 VAMP4O75379 141 aa15.29■□□□□ 0.04
HDAC8-217ENST00000478743 ALDH1L1O75891 902 aa15.29■□□□□ 0.04
HDAC8-217ENST00000478743 RFX5P48382 616 aaPredicted RBP15.29■□□□□ 0.04
HDAC8-217ENST00000478743 CCNA1P78396 465 aa15.29■□□□□ 0.04
HDAC8-217ENST00000478743 RASGRF1Q13972 1273 aa15.29■□□□□ 0.04
HDAC8-217ENST00000478743 PPP2R2DQ66LE6 453 aa15.29■□□□□ 0.04
HDAC8-217ENST00000478743 ATG9AQ7Z3C6 839 aa15.29■□□□□ 0.04
HDAC8-217ENST00000478743 CERS4Q9HA82 394 aa15.29■□□□□ 0.04
HDAC8-217ENST00000478743 DENND2AQ9ULE3 1009 aa15.29■□□□□ 0.04
HDAC8-217ENST00000478743 NPM3O75607 178 aaKnown RBP15.28■□□□□ 0.04
HDAC8-217ENST00000478743 ARHGEF15O94989 841 aa15.28■□□□□ 0.04
HDAC8-217ENST00000478743 ASNSP08243 561 aa15.28■□□□□ 0.04
HDAC8-217ENST00000478743 TAL1P17542 331 aaPredicted RBP15.28■□□□□ 0.04
HDAC8-217ENST00000478743 MECOMQ03112 1051 aa15.28■□□□□ 0.04
HDAC8-217ENST00000478743 ATP2B3Q16720 1220 aa15.28■□□□□ 0.04
HDAC8-217ENST00000478743 DPP9Q86TI2 863 aa15.28■□□□□ 0.04
HDAC8-217ENST00000478743 SRCIN1Q9C0H9 1055 aa15.28■□□□□ 0.04
HDAC8-217ENST00000478743 BRWD1Q9NSI6 2320 aa15.27■□□□□ 0.04
HDAC8-217ENST00000478743 UMODL1Q5DID0 1318 aa15.27■□□□□ 0.04
HDAC8-217ENST00000478743 FANCIQ9NVI1 1328 aa15.27■□□□□ 0.04
HDAC8-217ENST00000478743 EYA2O00167 538 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms