RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, human

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-211	ENST00000478582	GUCY1A2	P33402	732 aa		31.81	■■■□□ 2.68
CCM2-211	ENST00000478582	PTH1R	Q03431	593 aa		31.81	■■■□□ 2.68
CCM2-211	ENST00000478582	CTDSPL2	Q05D32	466 aa		31.81	■■■□□ 2.68
CCM2-211	ENST00000478582	TMEM179	Q6ZVK1	233 aa		31.81	■■■□□ 2.68
CCM2-211	ENST00000478582	CCDC84	Q86UT8	332 aa	Predicted RBP	31.81	■■■□□ 2.68
CCM2-211	ENST00000478582	STK11IP	Q8N1F8	1099 aa		31.81	■■■□□ 2.68
CCM2-211	ENST00000478582	ZNF280C	Q8ND82	737 aa		31.81	■■■□□ 2.68
CCM2-211	ENST00000478582	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	31.81	■■■□□ 2.68
CCM2-211	ENST00000478582	PHIP	Q8WWQ0	1821 aa		31.81	■■■□□ 2.68
CCM2-211	ENST00000478582		A0A0G2JLL6	359 aa	Predicted RBP	31.8	■■■□□ 2.68
CCM2-211	ENST00000478582	PDHX	O00330	501 aa		31.8	■■■□□ 2.68
CCM2-211	ENST00000478582	FBXO46	Q6PJ61	603 aa	Predicted RBP	31.8	■■■□□ 2.68
CCM2-211	ENST00000478582	PRRT2	Q7Z6L0	340 aa	Predicted RBP	31.8	■■■□□ 2.68
CCM2-211	ENST00000478582	CD99L2	Q8TCZ2	262 aa		31.8	■■■□□ 2.68
CCM2-211	ENST00000478582	MAP4K1	Q92918	833 aa		31.8	■■■□□ 2.68
CCM2-211	ENST00000478582	ZNF213	O14771	459 aa		31.79	■■■□□ 2.68
CCM2-211	ENST00000478582	KIAA1211	Q6ZU35	1233 aa		31.79	■■■□□ 2.68
CCM2-211	ENST00000478582	FASTKD5	Q7L8L6	764 aa	Known RBP	31.79	■■■□□ 2.68
CCM2-211	ENST00000478582	ZNF444	Q8N0Y2	327 aa	Predicted RBP	31.79	■■■□□ 2.68
CCM2-211	ENST00000478582	TRIM17	Q9Y577	477 aa		31.79	■■■□□ 2.68
CCM2-211	ENST00000478582	MPHOSPH10	O00566	681 aa	Known RBP	31.78	■■■□□ 2.68
CCM2-211	ENST00000478582	PC	P11498	1178 aa	Known RBP	31.78	■■■□□ 2.68
CCM2-211	ENST00000478582	SPP2	Q13103	211 aa		31.78	■■■□□ 2.68
CCM2-211	ENST00000478582	RAB3GAP1	Q15042	981 aa		31.78	■■■□□ 2.68
CCM2-211	ENST00000478582	GPAT2	Q6NUI2	795 aa		31.78	■■■□□ 2.68
CCM2-211	ENST00000478582	OTOP1	Q7RTM1	612 aa		31.78	■■■□□ 2.68
CCM2-211	ENST00000478582	NBPF3	Q9H094	633 aa		31.78	■■■□□ 2.68
CCM2-211	ENST00000478582	HPS5	Q9UPZ3	1129 aa		31.78	■■■□□ 2.68
CCM2-211	ENST00000478582	GTF3C3	Q9Y5Q9	886 aa		31.78	■■■□□ 2.68
CCM2-211	ENST00000478582	TACC3	Q9Y6A5	838 aa		31.78	■■■□□ 2.68
CCM2-211	ENST00000478582		U3KPZ7	1027 aa	Predicted RBP	31.78	■■■□□ 2.68
CCM2-211	ENST00000478582	MYH8	P13535	1937 aa		31.77	■■■□□ 2.68
CCM2-211	ENST00000478582	ORC4	O43929	436 aa		31.77	■■■□□ 2.68
CCM2-211	ENST00000478582	PRDM1	O75626	825 aa		31.77	■■■□□ 2.68
CCM2-211	ENST00000478582	SEPT2	Q15019	361 aa		31.77	■■■□□ 2.68
CCM2-211	ENST00000478582	IMMT	Q16891	758 aa	Known RBP	31.77	■■■□□ 2.68
CCM2-211	ENST00000478582	LSG1	Q9H089	658 aa	Known RBP	31.77	■■■□□ 2.68
CCM2-211	ENST00000478582	TRIM75P	A6NK02	468 aa		31.76	■■■□□ 2.67
CCM2-211	ENST00000478582	HAND2	P61296	217 aa		31.76	■■■□□ 2.67
CCM2-211	ENST00000478582	STAG1	Q8WVM7	1258 aa		31.76	■■■□□ 2.67
CCM2-211	ENST00000478582	SH3D19	Q5HYK7	790 aa		31.75	■■■□□ 2.67
CCM2-211	ENST00000478582	AKNAD1	Q5T1N1	836 aa		31.75	■■■□□ 2.67
CCM2-211	ENST00000478582	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	31.75	■■■□□ 2.67
CCM2-211	ENST00000478582	EFCC1	Q9HA90	598 aa		31.75	■■■□□ 2.67
CCM2-211	ENST00000478582	INCENP	Q9NQS7	918 aa		31.75	■■■□□ 2.67
CCM2-211	ENST00000478582	PTPRF	P10586	1907 aa		31.75	■■■□□ 2.67
CCM2-211	ENST00000478582	BACE1	P56817	501 aa		31.74	■■■□□ 2.67
CCM2-211	ENST00000478582	ARHGEF6	Q15052	776 aa		31.74	■■■□□ 2.67
CCM2-211	ENST00000478582	C17orf99	Q6UX52	265 aa		31.74	■■■□□ 2.67
CCM2-211	ENST00000478582	GADL1	Q6ZQY3	521 aa		31.74	■■■□□ 2.67
CCM2-211	ENST00000478582	RNF41	Q9H4P4	317 aa	Predicted RBP	31.74	■■■□□ 2.67
CCM2-211	ENST00000478582	KANSL2	Q9H9L4	492 aa		31.74	■■■□□ 2.67
CCM2-211	ENST00000478582	C19orf81	C9J6K1	198 aa		31.73	■■■□□ 2.67
CCM2-211	ENST00000478582	USP17L10	C9JJH3	530 aa		31.73	■■■□□ 2.67
CCM2-211	ENST00000478582	MFSD6	Q6ZSS7	791 aa		31.73	■■■□□ 2.67
CCM2-211	ENST00000478582	TBC1D10C	Q8IV04	446 aa		31.73	■■■□□ 2.67
CCM2-211	ENST00000478582	NEDD1	Q8NHV4	660 aa		31.73	■■■□□ 2.67
CCM2-211	ENST00000478582	LAMA4	Q16363	1823 aa		31.72	■■■□□ 2.67
CCM2-211	ENST00000478582	PLIN4	Q96Q06	1357 aa		31.72	■■■□□ 2.67
CCM2-211	ENST00000478582	NT5C2	P49902	561 aa		31.72	■■■□□ 2.67
CCM2-211	ENST00000478582	CAP1	Q01518	475 aa		31.72	■■■□□ 2.67
CCM2-211	ENST00000478582	SIAH1	Q8IUQ4	282 aa		31.72	■■■□□ 2.67
CCM2-211	ENST00000478582	ANO2	Q9NQ90	1003 aa		31.72	■■■□□ 2.67
CCM2-211	ENST00000478582	SLC45A1	Q9Y2W3	748 aa		31.72	■■■□□ 2.67
CCM2-211	ENST00000478582	GREB1L	Q9C091	1923 aa	Predicted RBP	31.71	■■■□□ 2.67
CCM2-211	ENST00000478582	IGKV6D-41	A0A0C4DH26	115 aa		31.71	■■■□□ 2.67
CCM2-211	ENST00000478582	TFAP4	Q01664	338 aa		31.71	■■■□□ 2.67
CCM2-211	ENST00000478582	PROCA1	Q8NCQ7	364 aa	Predicted RBP	31.71	■■■□□ 2.67
CCM2-211	ENST00000478582	PARK7	Q99497	189 aa	Known RBP	31.71	■■■□□ 2.67
CCM2-211	ENST00000478582	KIAA1683	Q9H0B3	1180 aa		31.71	■■■□□ 2.67
CCM2-211	ENST00000478582	PTPN22	Q9Y2R2	807 aa		31.71	■■■□□ 2.67
CCM2-211	ENST00000478582	RBM8A	Q9Y5S9	174 aa	Known RBP	31.71	■■■□□ 2.67
CCM2-211	ENST00000478582	ADGRA2	Q96PE1	1338 aa		31.71	■■■□□ 2.67
CCM2-211	ENST00000478582	TSPY3	P0CV98	308 aa		31.7	■■■□□ 2.67
CCM2-211	ENST00000478582	TSPY8	P0CW00	308 aa		31.7	■■■□□ 2.67
CCM2-211	ENST00000478582	ICA1	Q05084	483 aa		31.7	■■■□□ 2.67
CCM2-211	ENST00000478582	MTMR2	Q13614	643 aa		31.7	■■■□□ 2.67
CCM2-211	ENST00000478582	CPA4	Q9UI42	421 aa		31.7	■■■□□ 2.67
CCM2-211	ENST00000478582	CYP21A2	P08686	494 aa		31.69	■■■□□ 2.66
CCM2-211	ENST00000478582	RGS19	P49795	217 aa		31.69	■■■□□ 2.66
CCM2-211	ENST00000478582	KIF22	Q14807	665 aa		31.69	■■■□□ 2.66
CCM2-211	ENST00000478582	FAM47A	Q5JRC9	791 aa		31.69	■■■□□ 2.66
CCM2-211	ENST00000478582	ACER1	Q8TDN7	264 aa		31.69	■■■□□ 2.66
CCM2-211	ENST00000478582		A0A1W2PRG0	241 aa		31.68	■■■□□ 2.66
CCM2-211	ENST00000478582	CYP2C8	P10632	490 aa		31.68	■■■□□ 2.66
CCM2-211	ENST00000478582	HMGCS2	P54868	508 aa		31.68	■■■□□ 2.66
CCM2-211	ENST00000478582	LACTB	P83111	547 aa	Predicted RBP	31.68	■■■□□ 2.66
CCM2-211	ENST00000478582	USP17L2	Q6R6M4	530 aa		31.68	■■■□□ 2.66
CCM2-211	ENST00000478582	ARHGEF10L	Q9HCE6	1279 aa		31.68	■■■□□ 2.66
CCM2-211	ENST00000478582	NYAP2	Q9P242	653 aa		31.68	■■■□□ 2.66
CCM2-211	ENST00000478582	AGTPBP1	Q9UPW5	1226 aa		31.68	■■■□□ 2.66
CCM2-211	ENST00000478582	TSPY2	A6NKD2	308 aa		31.67	■■■□□ 2.66
CCM2-211	ENST00000478582	RANBP6	O60518	1105 aa	Known RBP	31.67	■■■□□ 2.66
CCM2-211	ENST00000478582	USP14	P54578	494 aa		31.67	■■■□□ 2.66
CCM2-211	ENST00000478582	NECTIN1	Q15223	517 aa		31.67	■■■□□ 2.66
CCM2-211	ENST00000478582	C12orf42	Q96LP6	360 aa		31.67	■■■□□ 2.66
CCM2-211	ENST00000478582	TOMM22	Q9NS69	142 aa		31.67	■■■□□ 2.66
CCM2-211	ENST00000478582	TMX2	Q9Y320	296 aa		31.67	■■■□□ 2.66
CCM2-211	ENST00000478582	EEF2	P13639	858 aa	Known RBP	31.66	■■■□□ 2.66
CCM2-211	ENST00000478582	CLEC10A	Q8IUN9	316 aa		31.66	■■■□□ 2.66

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms