RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-222ENST00000478279 SLC39A5Q6ZMH5 540 aa13.03□□□□□ -0.32
APTX-222ENST00000478279 ARRDC4Q8NCT1 418 aa13.03□□□□□ -0.32
APTX-222ENST00000478279 TRPV1Q8NER1 839 aa13.03□□□□□ -0.32
APTX-222ENST00000478279 TGFBRAP1Q8WUH2 860 aa13.03□□□□□ -0.32
APTX-222ENST00000478279 SMC4Q9NTJ3 1288 aa13.03□□□□□ -0.32
APTX-222ENST00000478279 AATFQ9NY61 560 aaKnown RBP eCLIP13.03□□□□□ -0.32
APTX-222ENST00000478279 PALD1Q9ULE6 856 aa13.03□□□□□ -0.32
APTX-222ENST00000478279 RLFQ13129 1914 aa13.03□□□□□ -0.32
APTX-222ENST00000478279 SRGAP3O43295 1099 aa13.02□□□□□ -0.33
APTX-222ENST00000478279 ANP32CO43423 234 aa13.02□□□□□ -0.33
APTX-222ENST00000478279 IGHA2P01877 340 aa13.02□□□□□ -0.33
APTX-222ENST00000478279 FOSL2P15408 326 aa13.02□□□□□ -0.33
APTX-222ENST00000478279 MCAMP43121 646 aa13.02□□□□□ -0.33
APTX-222ENST00000478279 GRB14Q14449 540 aa13.02□□□□□ -0.33
APTX-222ENST00000478279 GJC2Q5T442 439 aaPredicted RBP13.02□□□□□ -0.33
APTX-222ENST00000478279 NAA16Q6N069 864 aaPredicted RBP13.02□□□□□ -0.33
APTX-222ENST00000478279 CATSPERGQ6ZRH7 1159 aa13.02□□□□□ -0.33
APTX-222ENST00000478279 NPLOC4Q8TAT6 608 aa13.02□□□□□ -0.33
APTX-222ENST00000478279 BADQ92934 168 aa13.02□□□□□ -0.33
APTX-222ENST00000478279 MEIS3Q99687 375 aa13.02□□□□□ -0.33
APTX-222ENST00000478279 PRDM5Q9NQX1 630 aaPredicted RBP13.02□□□□□ -0.33
APTX-222ENST00000478279 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.02□□□□□ -0.33
APTX-222ENST00000478279 IVNS1ABPQ9Y6Y0 642 aa13.02□□□□□ -0.33
APTX-222ENST00000478279 FLT1P17948 1338 aa13.02□□□□□ -0.33
APTX-222ENST00000478279 TMEM265A0A087WTH1 108 aa13.01□□□□□ -0.33
APTX-222ENST00000478279 KBTBD13C9JR72 458 aa13.01□□□□□ -0.33
APTX-222ENST00000478279 GH2P01242 217 aa13.01□□□□□ -0.33
APTX-222ENST00000478279 HLA-DOAP06340 250 aa13.01□□□□□ -0.33
APTX-222ENST00000478279 UQCRFS1P1P0C7P4 283 aa13.01□□□□□ -0.33
APTX-222ENST00000478279 CYBAP13498 195 aa13.01□□□□□ -0.33
APTX-222ENST00000478279 SNX17Q15036 470 aa13.01□□□□□ -0.33
APTX-222ENST00000478279 ATF7IPQ6VMQ6 1270 aa13.01□□□□□ -0.33
APTX-222ENST00000478279 LBX2Q6XYB7 198 aa13.01□□□□□ -0.33
APTX-222ENST00000478279 FEZ1Q99689 392 aa13.01□□□□□ -0.33
APTX-222ENST00000478279 CDK5RAP2Q96SN8 1893 aa13.01□□□□□ -0.33
APTX-222ENST00000478279 BDP1A6H8Y1 2624 aa13□□□□□ -0.33
APTX-222ENST00000478279 USP14P54578 494 aa13□□□□□ -0.33
APTX-222ENST00000478279 SLFN5Q08AF3 891 aa13□□□□□ -0.33
APTX-222ENST00000478279 MTX1Q13505 466 aa13□□□□□ -0.33
APTX-222ENST00000478279 ZYXQ15942 572 aaKnown RBP13□□□□□ -0.33
APTX-222ENST00000478279 API5Q9BZZ5 524 aaKnown RBP13□□□□□ -0.33
APTX-222ENST00000478279 PDLIM7Q9NR12 457 aa13□□□□□ -0.33
APTX-222ENST00000478279 BTBD7Q9P203 1132 aa13□□□□□ -0.33
APTX-222ENST00000478279 SAP30BPQ9UHR5 308 aaKnown RBP13□□□□□ -0.33
APTX-222ENST00000478279 NOB1Q9ULX3 412 aaKnown RBP13□□□□□ -0.33
APTX-222ENST00000478279 FOCADQ5VW36 1801 aa12.99□□□□□ -0.33
APTX-222ENST00000478279 TRIM43BA6NCK2 446 aa12.99□□□□□ -0.33
APTX-222ENST00000478279 SEPT4O43236 478 aa12.99□□□□□ -0.33
APTX-222ENST00000478279 VCAM1P19320 739 aa12.99□□□□□ -0.33
APTX-222ENST00000478279 TRIM60Q495X7 471 aa12.99□□□□□ -0.33
APTX-222ENST00000478279 C1orf53Q5VUE5 145 aa12.99□□□□□ -0.33
APTX-222ENST00000478279 OLFML2BQ68BL8 750 aa12.99□□□□□ -0.33
APTX-222ENST00000478279 TATDN1Q6P1N9 297 aa12.99□□□□□ -0.33
APTX-222ENST00000478279 SH3RF1Q7Z6J0 888 aa12.99□□□□□ -0.33
APTX-222ENST00000478279 ADGRA1Q86SQ6 560 aa12.99□□□□□ -0.33
APTX-222ENST00000478279 DPP9Q86TI2 863 aa12.99□□□□□ -0.33
APTX-222ENST00000478279 TRIM43Q96BQ3 446 aaPredicted RBP12.99□□□□□ -0.33
APTX-222ENST00000478279 KIAA1683Q9H0B3 1180 aa12.99□□□□□ -0.33
APTX-222ENST00000478279 SPDYE16A6NNV3 312 aaPredicted RBP12.98□□□□□ -0.33
APTX-222ENST00000478279 IGSF3O75054 1194 aa12.98□□□□□ -0.33
APTX-222ENST00000478279 GNAI3P08754 354 aa12.98□□□□□ -0.33
APTX-222ENST00000478279 COL9A1P20849 921 aa12.98□□□□□ -0.33
APTX-222ENST00000478279 ADCYAP1R1P41586 468 aa12.98□□□□□ -0.33
APTX-222ENST00000478279 TJAP1Q5JTD0 557 aa12.98□□□□□ -0.33
APTX-222ENST00000478279 ANO1Q5XXA6 986 aa12.98□□□□□ -0.33
APTX-222ENST00000478279 SNRKQ9NRH2 765 aa12.98□□□□□ -0.33
APTX-222ENST00000478279 MYO9BQ13459 2157 aa12.98□□□□□ -0.33
APTX-222ENST00000478279 TNFRSF10AO00220 468 aa12.97□□□□□ -0.33
APTX-222ENST00000478279 STRNO43815 780 aa12.97□□□□□ -0.33
APTX-222ENST00000478279 MYCNP04198 464 aaPredicted RBP12.97□□□□□ -0.33
APTX-222ENST00000478279 ADORA2AP29274 412 aa12.97□□□□□ -0.33
APTX-222ENST00000478279 TLE2Q04725 743 aa12.97□□□□□ -0.33
APTX-222ENST00000478279 G3BP1Q13283 466 aaKnown RBP eCLIP12.97□□□□□ -0.33
APTX-222ENST00000478279 RAB3GAP1Q15042 981 aa12.97□□□□□ -0.33
APTX-222ENST00000478279 ACER1Q8TDN7 264 aa12.97□□□□□ -0.33
APTX-222ENST00000478279 FERMT2Q96AC1 680 aa12.97□□□□□ -0.33
APTX-222ENST00000478279 RNPC3Q96LT9 517 aaKnown RBP12.97□□□□□ -0.33
APTX-222ENST00000478279 TACC3Q9Y6A5 838 aa12.97□□□□□ -0.33
APTX-222ENST00000478279 MYH1P12882 1939 aa12.96□□□□□ -0.33
APTX-222ENST00000478279 CYP2E1P05181 493 aaPredicted RBP12.96□□□□□ -0.33
APTX-222ENST00000478279 DYNLL1P63167 89 aaKnown RBP12.96□□□□□ -0.33
APTX-222ENST00000478279 GRIN2CQ14957 1233 aa12.96□□□□□ -0.33
APTX-222ENST00000478279 LRRC41Q15345 812 aa12.96□□□□□ -0.33
APTX-222ENST00000478279 CERKLQ49MI3 558 aaPredicted RBP12.96□□□□□ -0.33
APTX-222ENST00000478279 TTC39AQ5SRH9 613 aa12.96□□□□□ -0.33
APTX-222ENST00000478279 MOV10L1Q9BXT6 1211 aaKnown RBP12.96□□□□□ -0.33
APTX-222ENST00000478279 EHD4Q9H223 541 aa12.96□□□□□ -0.33
APTX-222ENST00000478279 RPAP3Q9H6T3 665 aaPredicted RBP12.96□□□□□ -0.33
APTX-222ENST00000478279 SMCHD1A6NHR9 2005 aa12.96□□□□□ -0.34
APTX-222ENST00000478279 MYO5AQ9Y4I1 1855 aaKnown RBP12.95□□□□□ -0.34
APTX-222ENST00000478279 ZNF236Q9UL36 1845 aa12.95□□□□□ -0.34
APTX-222ENST00000478279 CT47B1P0C2W7 299 aaPredicted RBP12.95□□□□□ -0.34
APTX-222ENST00000478279 ITGB8P26012 769 aa12.95□□□□□ -0.34
APTX-222ENST00000478279 EPHB4P54760 987 aa12.95□□□□□ -0.34
APTX-222ENST00000478279 COG2Q14746 738 aa12.95□□□□□ -0.34
APTX-222ENST00000478279 ABCB5Q2M3G0 1257 aa12.95□□□□□ -0.34
APTX-222ENST00000478279 CCDC158Q5M9N0 1113 aa12.95□□□□□ -0.34
APTX-222ENST00000478279 USP38Q8NB14 1042 aa12.95□□□□□ -0.34
APTX-222ENST00000478279 SHCBP1Q8NEM2 672 aa12.95□□□□□ -0.34
APTX-222ENST00000478279 CABP5Q9NP86 173 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms