RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 USP17L13C9JLJ4 530 aa20.3■□□□□ 0.84
TRIM13-208ENST00000478111 USP17L11C9JVI0 530 aa20.3■□□□□ 0.84
TRIM13-208ENST00000478111 USP17L18D6R9N7 530 aa20.3■□□□□ 0.84
TRIM13-208ENST00000478111 USP17L22D6RA61 530 aa20.3■□□□□ 0.84
TRIM13-208ENST00000478111 USP17L17D6RBQ6 530 aa20.3■□□□□ 0.84
TRIM13-208ENST00000478111 USP17L19D6RCP7 530 aa20.3■□□□□ 0.84
TRIM13-208ENST00000478111 USP17L20D6RJB6 530 aa20.3■□□□□ 0.84
TRIM13-208ENST00000478111 PRKAR2AP13861 404 aaKnown RBP20.3■□□□□ 0.84
TRIM13-208ENST00000478111 PDE6AP16499 860 aa20.3■□□□□ 0.84
TRIM13-208ENST00000478111 GABPAQ06546 454 aa20.3■□□□□ 0.84
TRIM13-208ENST00000478111 USP17L24Q0WX57 530 aa20.3■□□□□ 0.84
TRIM13-208ENST00000478111 RAB3GAP1Q15042 981 aa20.3■□□□□ 0.84
TRIM13-208ENST00000478111 ZYXQ15942 572 aaKnown RBP20.3■□□□□ 0.84
TRIM13-208ENST00000478111 ABCB5Q2M3G0 1257 aa20.3■□□□□ 0.84
TRIM13-208ENST00000478111 CATSPERGQ6ZRH7 1159 aa20.3■□□□□ 0.84
TRIM13-208ENST00000478111 GPR142Q7Z601 462 aa20.3■□□□□ 0.84
TRIM13-208ENST00000478111 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.3■□□□□ 0.84
TRIM13-208ENST00000478111 GTF3C2Q8WUA4 911 aaPredicted RBP20.3■□□□□ 0.84
TRIM13-208ENST00000478111 KIAA1683Q9H0B3 1180 aa20.3■□□□□ 0.84
TRIM13-208ENST00000478111 RLFQ13129 1914 aa20.29■□□□□ 0.84
TRIM13-208ENST00000478111 MAGEB6P1A0A0J9YX57 407 aa20.29■□□□□ 0.84
TRIM13-208ENST00000478111 TCRBV5S4A2TA0A5A2 114 aa20.29■□□□□ 0.84
TRIM13-208ENST00000478111 TTF1Q15361 905 aaPredicted RBP20.29■□□□□ 0.84
TRIM13-208ENST00000478111 CCL14Q16627 93 aa20.29■□□□□ 0.84
TRIM13-208ENST00000478111 SLC9C2Q5TAH2 1124 aa20.29■□□□□ 0.84
TRIM13-208ENST00000478111 PLEKHH3Q7Z736 793 aa20.29■□□□□ 0.84
TRIM13-208ENST00000478111 RPAP2Q8IXW5 612 aaPredicted RBP20.29■□□□□ 0.84
TRIM13-208ENST00000478111 KIF1BPQ96EK5 621 aa20.29■□□□□ 0.84
TRIM13-208ENST00000478111 ZBTB40Q9NUA8 1239 aa20.29■□□□□ 0.84
TRIM13-208ENST00000478111 RABGAP1Q9Y3P9 1069 aa20.29■□□□□ 0.84
TRIM13-208ENST00000478111 MYH8P13535 1937 aa20.29■□□□□ 0.84
TRIM13-208ENST00000478111 VCAM1P19320 739 aa20.28■□□□□ 0.84
TRIM13-208ENST00000478111 CACNB2Q08289 660 aaPredicted RBP20.28■□□□□ 0.84
TRIM13-208ENST00000478111 CLASRPQ8N2M8 674 aaKnown RBP20.28■□□□□ 0.84
TRIM13-208ENST00000478111 FEZ1Q99689 392 aa20.28■□□□□ 0.84
TRIM13-208ENST00000478111 COL6A3P12111 3177 aa20.28■□□□□ 0.84
TRIM13-208ENST00000478111 ZNF532Q9HCE3 1301 aa20.27■□□□□ 0.84
TRIM13-208ENST00000478111 FRMPD3Q5JV73 1810 aa20.27■□□□□ 0.84
TRIM13-208ENST00000478111 BAZ2AQ9UIF9 1905 aaKnown RBP20.27■□□□□ 0.84
TRIM13-208ENST00000478111 APBB1O00213 710 aa20.27■□□□□ 0.84
TRIM13-208ENST00000478111 GOLIM4O00461 696 aa20.27■□□□□ 0.84
TRIM13-208ENST00000478111 MS4A1P11836 297 aa20.27■□□□□ 0.84
TRIM13-208ENST00000478111 USP14P54578 494 aa20.27■□□□□ 0.84
TRIM13-208ENST00000478111 PDE3AQ14432 1141 aa20.27■□□□□ 0.84
TRIM13-208ENST00000478111 LBX2Q6XYB7 198 aa20.27■□□□□ 0.84
TRIM13-208ENST00000478111 TRMT44Q8IYL2 757 aaKnown RBP20.27■□□□□ 0.84
TRIM13-208ENST00000478111 EDC3Q96F86 508 aaKnown RBP20.27■□□□□ 0.84
TRIM13-208ENST00000478111 NBPF3Q9H094 633 aa20.27■□□□□ 0.84
TRIM13-208ENST00000478111 CABP5Q9NP86 173 aa20.27■□□□□ 0.84
TRIM13-208ENST00000478111 STAP2Q9UGK3 403 aa20.27■□□□□ 0.84
TRIM13-208ENST00000478111 COG6Q9Y2V7 657 aa20.27■□□□□ 0.84
TRIM13-208ENST00000478111 MYH7P12883 1935 aa20.26■□□□□ 0.83
TRIM13-208ENST00000478111 POLR3DP05423 398 aaPredicted RBP20.26■□□□□ 0.83
TRIM13-208ENST00000478111 ZKSCAN1P17029 563 aaPredicted RBP20.26■□□□□ 0.83
TRIM13-208ENST00000478111 RGS2P41220 211 aa20.26■□□□□ 0.83
TRIM13-208ENST00000478111 SEPT2Q15019 361 aa20.26■□□□□ 0.83
TRIM13-208ENST00000478111 LHX8Q68G74 356 aa20.26■□□□□ 0.83
TRIM13-208ENST00000478111 LCORLQ8N3X6 602 aa20.26■□□□□ 0.83
TRIM13-208ENST00000478111 CRNKL1Q9BZJ0 848 aaKnown RBP20.26■□□□□ 0.83
TRIM13-208ENST00000478111 DCP1AQ9NPI6 582 aaPredicted RBP20.26■□□□□ 0.83
TRIM13-208ENST00000478111 BTBD7Q9P203 1132 aa20.26■□□□□ 0.83
TRIM13-208ENST00000478111 A0A1W2PPC1 479 aa20.25■□□□□ 0.83
TRIM13-208ENST00000478111 A0A1W2PRG0 241 aa20.25■□□□□ 0.83
TRIM13-208ENST00000478111 CCND3P30281 292 aaPredicted RBP20.25■□□□□ 0.83
TRIM13-208ENST00000478111 CCAR1Q8IX12 1150 aaKnown RBP20.25■□□□□ 0.83
TRIM13-208ENST00000478111 SDR42E1Q8WUS8 393 aa20.25■□□□□ 0.83
TRIM13-208ENST00000478111 DNAJC2Q99543 621 aaKnown RBP20.25■□□□□ 0.83
TRIM13-208ENST00000478111 C11orf49Q9H6J7 331 aa20.25■□□□□ 0.83
TRIM13-208ENST00000478111 MCM9Q9NXL9 1143 aa20.25■□□□□ 0.83
TRIM13-208ENST00000478111 DDX19BQ9UMR2 479 aa20.25■□□□□ 0.83
TRIM13-208ENST00000478111 PFASO15067 1338 aa20.25■□□□□ 0.83
TRIM13-208ENST00000478111 LAMA2P24043 3122 aaKnown RBP20.24■□□□□ 0.83
TRIM13-208ENST00000478111 SPDYE16A6NNV3 312 aaPredicted RBP20.24■□□□□ 0.83
TRIM13-208ENST00000478111 IFIT2P09913 472 aaKnown RBP20.24■□□□□ 0.83
TRIM13-208ENST00000478111 CYP2D6P10635 497 aa20.24■□□□□ 0.83
TRIM13-208ENST00000478111 MAP2K5Q13163 448 aa20.24■□□□□ 0.83
TRIM13-208ENST00000478111 SLFNL1Q499Z3 407 aa20.24■□□□□ 0.83
TRIM13-208ENST00000478111 C7orf61Q8IZ16 206 aa20.24■□□□□ 0.83
TRIM13-208ENST00000478111 APBA2Q99767 749 aa20.24■□□□□ 0.83
TRIM13-208ENST00000478111 GDF15Q99988 308 aa20.24■□□□□ 0.83
TRIM13-208ENST00000478111 RPAP3Q9H6T3 665 aaPredicted RBP20.24■□□□□ 0.83
TRIM13-208ENST00000478111 FLRT1Q9NZU1 646 aa20.24■□□□□ 0.83
TRIM13-208ENST00000478111 SOX1O00570 391 aaPredicted RBP20.23■□□□□ 0.83
TRIM13-208ENST00000478111 RAB11FIP3O75154 756 aa20.23■□□□□ 0.83
TRIM13-208ENST00000478111 HMMRO75330 724 aa20.23■□□□□ 0.83
TRIM13-208ENST00000478111 COL6A1P12109 1028 aa20.23■□□□□ 0.83
TRIM13-208ENST00000478111 PTPREP23469 700 aa20.23■□□□□ 0.83
TRIM13-208ENST00000478111 CCNA1P78396 465 aa20.23■□□□□ 0.83
TRIM13-208ENST00000478111 ARMT1Q9H993 441 aa20.23■□□□□ 0.83
TRIM13-208ENST00000478111 PARP14Q460N5 1801 aa20.23■□□□□ 0.83
TRIM13-208ENST00000478111 A0A0G2JMZ2 1700 aa20.22■□□□□ 0.83
TRIM13-208ENST00000478111 SLC15A5A6NIM6 579 aa20.22■□□□□ 0.83
TRIM13-208ENST00000478111 PRKAB2O43741 272 aa20.22■□□□□ 0.83
TRIM13-208ENST00000478111 KIAA1755Q5JYT7 1200 aa20.22■□□□□ 0.83
TRIM13-208ENST00000478111 SIAH1Q8IUQ4 282 aa20.22■□□□□ 0.83
TRIM13-208ENST00000478111 SLC44A5Q8NCS7 719 aa20.22■□□□□ 0.83
TRIM13-208ENST00000478111 PAG1Q9NWQ8 432 aa20.22■□□□□ 0.83
TRIM13-208ENST00000478111 ZMYND8Q9ULU4 1186 aaPredicted RBP20.22■□□□□ 0.83
TRIM13-208ENST00000478111 SMIM22K7EJ46 135 aa20.21■□□□□ 0.83
TRIM13-208ENST00000478111 IGHA2P01877 340 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms