RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 GOLGA8FQ08AF8 430 aa15.36■□□□□ 0.05
HLA-DMA-208ENST00000477541 GOLGA8DPQ0D2H9 430 aa15.36■□□□□ 0.05
HLA-DMA-208ENST00000477541 SEMA3FQ13275 785 aa15.36■□□□□ 0.05
HLA-DMA-208ENST00000477541 CUL4BQ13620 913 aa15.36■□□□□ 0.05
HLA-DMA-208ENST00000477541 AKNAD1Q5T1N1 836 aa15.36■□□□□ 0.05
HLA-DMA-208ENST00000477541 FAM71BQ8TC56 605 aa15.36■□□□□ 0.05
HLA-DMA-208ENST00000477541 NAPGQ99747 312 aaPredicted RBP15.36■□□□□ 0.05
HLA-DMA-208ENST00000477541 RNF26Q9BY78 433 aaPredicted RBP15.36■□□□□ 0.05
HLA-DMA-208ENST00000477541 ANKZF1Q9H8Y5 726 aa15.36■□□□□ 0.05
HLA-DMA-208ENST00000477541 STRN4Q9NRL3 753 aa15.36■□□□□ 0.05
HLA-DMA-208ENST00000477541 MKRN1Q9UHC7 482 aaKnown RBP15.36■□□□□ 0.05
HLA-DMA-208ENST00000477541 FEZ2Q9UHY8 353 aaPredicted RBP15.36■□□□□ 0.05
HLA-DMA-208ENST00000477541 ZNF532Q9HCE3 1301 aa15.36■□□□□ 0.05
HLA-DMA-208ENST00000477541 RTL9Q8NET4 1388 aa15.35■□□□□ 0.05
HLA-DMA-208ENST00000477541 ERICH2A1L162 156 aa15.35■□□□□ 0.05
HLA-DMA-208ENST00000477541 ANKRD18BA2A2Z9 1011 aa15.35■□□□□ 0.05
HLA-DMA-208ENST00000477541 BTBD18B2RXH4 712 aa15.35■□□□□ 0.05
HLA-DMA-208ENST00000477541 CAPN2P17655 700 aa15.35■□□□□ 0.05
HLA-DMA-208ENST00000477541 ST5P78524 1137 aa15.35■□□□□ 0.05
HLA-DMA-208ENST00000477541 WDR93Q6P2C0 686 aa15.35■□□□□ 0.05
HLA-DMA-208ENST00000477541 CTR9Q6PD62 1173 aa15.35■□□□□ 0.05
HLA-DMA-208ENST00000477541 TMED8Q6PL24 325 aaPredicted RBP15.35■□□□□ 0.05
HLA-DMA-208ENST00000477541 VGLL2Q8N8G2 317 aa15.35■□□□□ 0.05
HLA-DMA-208ENST00000477541 ANKRD20A12PQ8NF67 263 aa15.35■□□□□ 0.05
HLA-DMA-208ENST00000477541 RPGRIP1Q96KN7 1286 aa15.35■□□□□ 0.05
HLA-DMA-208ENST00000477541 NACAP1Q9BZK3 213 aa15.35■□□□□ 0.05
HLA-DMA-208ENST00000477541 NAPBQ9H115 298 aa15.35■□□□□ 0.05
HLA-DMA-208ENST00000477541 L1RE1Q9UN81 338 aa15.35■□□□□ 0.05
HLA-DMA-208ENST00000477541 PNPLA7Q6ZV29 1317 aa15.35■□□□□ 0.05
HLA-DMA-208ENST00000477541 CTAGE15A4D2H0 777 aa15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 LRRC10BA6NIK2 292 aa15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 FOXN1O15353 648 aa15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 A1BGP04217 495 aa15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 PRR29P0C7W0 189 aa15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 CTAGE8P0CG41 777 aa15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 KARSQ15046 597 aaKnown RBP15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 VPS72Q15906 364 aa15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 CTAGE6Q86UF2 777 aa15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 CTAGE4Q8IX94 777 aa15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 CRACR2BQ8N4Y2 399 aaPredicted RBP15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 CTCFLQ8NI51 663 aaPredicted RBP15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 ZCRB1Q8TBF4 217 aaKnown RBP15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 RASSF4Q9H2L5 321 aa15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 SAMSN1Q9NSI8 373 aaKnown RBP15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 LIMA1Q9UHB6 759 aaKnown RBP15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 PLCH1Q4KWH8 1693 aa15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 SHANK3Q9BYB0 1731 aa15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 A0A0U1RQG5 324 aaPredicted RBP15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 TRIM75PA6NK02 468 aa15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 RBL2Q08999 1139 aa15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 MAP3K12Q12852 859 aa15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 WTAPQ15007 396 aa15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 KIF4BQ2VIQ3 1234 aa15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 HSP90B2PQ58FF3 399 aa15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 NOM1Q5C9Z4 860 aaKnown RBP15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 CYP26C1Q6V0L0 522 aa15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 RAD9BQ6WBX8 426 aa15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 LDHAL6AQ6ZMR3 332 aa15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 ZNF662Q6ZS27 426 aa15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 MFSD6Q6ZSS7 791 aa15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 IFNL3Q8IZI9 196 aa15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 MED15Q96RN5 788 aa15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 PIH1D3Q9NQM4 214 aaKnown RBP15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 DISP2A7MBM2 1401 aa15.34■□□□□ 0.05
HLA-DMA-208ENST00000477541 MYH2Q9UKX2 1941 aa15.33■□□□□ 0.05
HLA-DMA-208ENST00000477541 SOWAHDA6NJG2 315 aa15.33■□□□□ 0.04
HLA-DMA-208ENST00000477541 PDE8BO95263 885 aa15.33■□□□□ 0.04
HLA-DMA-208ENST00000477541 MAP9Q49MG5 647 aa15.33■□□□□ 0.04
HLA-DMA-208ENST00000477541 DESI2Q9BSY9 194 aa15.33■□□□□ 0.04
HLA-DMA-208ENST00000477541 EFCC1Q9HA90 598 aa15.33■□□□□ 0.04
HLA-DMA-208ENST00000477541 ZSWIM5Q9P217 1185 aa15.33■□□□□ 0.04
HLA-DMA-208ENST00000477541 MROH5Q6ZUA9 1318 aa15.33■□□□□ 0.04
HLA-DMA-208ENST00000477541 H3BQF6 201 aa15.32■□□□□ 0.04
HLA-DMA-208ENST00000477541 IDH1O75874 414 aaKnown RBP15.32■□□□□ 0.04
HLA-DMA-208ENST00000477541 DPYDQ12882 1025 aa15.32■□□□□ 0.04
HLA-DMA-208ENST00000477541 PUM3Q15397 648 aaKnown RBP15.32■□□□□ 0.04
HLA-DMA-208ENST00000477541 ZNF569Q5MCW4 686 aa15.32■□□□□ 0.04
HLA-DMA-208ENST00000477541 TRMT44Q8IYL2 757 aaKnown RBP15.32■□□□□ 0.04
HLA-DMA-208ENST00000477541 TTLL11Q8NHH1 800 aa15.32■□□□□ 0.04
HLA-DMA-208ENST00000477541 LPIN2Q92539 896 aa15.32■□□□□ 0.04
HLA-DMA-208ENST00000477541 CSRNP2Q9H175 543 aa15.32■□□□□ 0.04
HLA-DMA-208ENST00000477541 DLEC1Q9Y238 1755 aa15.32■□□□□ 0.04
HLA-DMA-208ENST00000477541 RXRAP19793 462 aa15.31■□□□□ 0.04
HLA-DMA-208ENST00000477541 LMAN1P49257 510 aa15.31■□□□□ 0.04
HLA-DMA-208ENST00000477541 CTSWP56202 376 aa15.31■□□□□ 0.04
HLA-DMA-208ENST00000477541 R3HDM1Q15032 1099 aaKnown RBP15.31■□□□□ 0.04
HLA-DMA-208ENST00000477541 GIGYF2Q6Y7W6 1299 aaKnown RBP15.31■□□□□ 0.04
HLA-DMA-208ENST00000477541 GOLGA6L1Q8N7Z2 621 aa15.31■□□□□ 0.04
HLA-DMA-208ENST00000477541 EHBP1Q8NDI1 1231 aa15.31■□□□□ 0.04
HLA-DMA-208ENST00000477541 EPC1Q9H2F5 836 aa15.31■□□□□ 0.04
HLA-DMA-208ENST00000477541 SENP2Q9HC62 589 aa15.31■□□□□ 0.04
HLA-DMA-208ENST00000477541 BRMS1Q9HCU9 246 aa15.31■□□□□ 0.04
HLA-DMA-208ENST00000477541 CNNM1Q9NRU3 951 aa15.31■□□□□ 0.04
HLA-DMA-208ENST00000477541 RMND1Q9NWS8 449 aa15.31■□□□□ 0.04
HLA-DMA-208ENST00000477541 PCDHB6Q9Y5E3 794 aa15.31■□□□□ 0.04
HLA-DMA-208ENST00000477541 ITGA6P23229 1130 aa15.31■□□□□ 0.04
HLA-DMA-208ENST00000477541 AARSP49588 968 aaKnown RBP eCLIP15.31■□□□□ 0.04
HLA-DMA-208ENST00000477541 AKAP17AQ02040 695 aaKnown RBP15.31■□□□□ 0.04
HLA-DMA-208ENST00000477541 PI16Q6UXB8 463 aa15.31■□□□□ 0.04
HLA-DMA-208ENST00000477541 SRLQ86TD4 932 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms