RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 MROH7-TTC4A0A0A0MT08 1334 aa7.78□□□□□ -1.16
LDB3-206ENST00000477489 GAKO14976 1311 aa7.78□□□□□ -1.16
LDB3-206ENST00000477489 NEDD4P46934 1319 aa7.78□□□□□ -1.16
LDB3-206ENST00000477489 CDK5RAP2Q96SN8 1893 aa7.77□□□□□ -1.17
LDB3-206ENST00000477489 GPR75-ASB3A0A0A6YYF3 556 aa7.77□□□□□ -1.17
LDB3-206ENST00000477489 CCDC69A6NI79 296 aa7.77□□□□□ -1.17
LDB3-206ENST00000477489 B4E1Z4 1266 aa7.77□□□□□ -1.17
LDB3-206ENST00000477489 GRIN3BO60391 1043 aa7.77□□□□□ -1.17
LDB3-206ENST00000477489 DDAH1O94760 285 aa7.77□□□□□ -1.17
LDB3-206ENST00000477489 CTDNEP1O95476 244 aa7.77□□□□□ -1.17
LDB3-206ENST00000477489 IFNAR1P17181 557 aa7.77□□□□□ -1.17
LDB3-206ENST00000477489 KLRK1P26718 216 aa7.77□□□□□ -1.17
LDB3-206ENST00000477489 METAP2P50579 478 aaKnown RBP eCLIP7.77□□□□□ -1.17
LDB3-206ENST00000477489 KCNC4Q03721 635 aa7.77□□□□□ -1.17
LDB3-206ENST00000477489 STK3Q13188 491 aa7.77□□□□□ -1.17
LDB3-206ENST00000477489 PTGDRQ13258 359 aa7.77□□□□□ -1.17
LDB3-206ENST00000477489 WTAPQ15007 396 aa7.77□□□□□ -1.17
LDB3-206ENST00000477489 TMEM67Q5HYA8 995 aa7.77□□□□□ -1.17
LDB3-206ENST00000477489 PODNQ7Z5L7 613 aa7.77□□□□□ -1.17
LDB3-206ENST00000477489 ADGRA1Q86SQ6 560 aa7.77□□□□□ -1.17
LDB3-206ENST00000477489 MPNDQ8N594 471 aa7.77□□□□□ -1.17
LDB3-206ENST00000477489 MIGA1Q8NAN2 632 aa7.77□□□□□ -1.17
LDB3-206ENST00000477489 SUPT20HQ8NEM7 779 aa7.77□□□□□ -1.17
LDB3-206ENST00000477489 ZNF384Q8TF68 577 aa7.77□□□□□ -1.17
LDB3-206ENST00000477489 RTFDC1Q9BY42 306 aaPredicted RBP7.77□□□□□ -1.17
LDB3-206ENST00000477489 ZC3H12CQ9C0D7 883 aaKnown RBP7.77□□□□□ -1.17
LDB3-206ENST00000477489 LY9Q9HBG7 655 aa7.77□□□□□ -1.17
LDB3-206ENST00000477489 DCP1AQ9NPI6 582 aaPredicted RBP7.77□□□□□ -1.17
LDB3-206ENST00000477489 RBM28Q9NW13 759 aaKnown RBP7.77□□□□□ -1.17
LDB3-206ENST00000477489 ZSWIM5Q9P217 1185 aa7.77□□□□□ -1.17
LDB3-206ENST00000477489 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.77□□□□□ -1.17
LDB3-206ENST00000477489 KIF13BQ9NQT8 1826 aa7.77□□□□□ -1.17
LDB3-206ENST00000477489 C10orf71Q711Q0 1435 aa7.77□□□□□ -1.17
LDB3-206ENST00000477489 MYO3BQ8WXR4 1341 aa7.77□□□□□ -1.17
LDB3-206ENST00000477489 A0A0G2JLW4 131 aa7.76□□□□□ -1.17
LDB3-206ENST00000477489 H0YIN7 160 aa7.76□□□□□ -1.17
LDB3-206ENST00000477489 IFIT3O14879 490 aaKnown RBP7.76□□□□□ -1.17
LDB3-206ENST00000477489 KDM4AO75164 1064 aa7.76□□□□□ -1.17
LDB3-206ENST00000477489 PRDX5P30044 214 aa7.76□□□□□ -1.17
LDB3-206ENST00000477489 HDLBPQ00341 1268 aaKnown RBP7.76□□□□□ -1.17
LDB3-206ENST00000477489 CHAF1AQ13111 956 aaPredicted RBP7.76□□□□□ -1.17
LDB3-206ENST00000477489 RESTQ13127 1097 aa7.76□□□□□ -1.17
LDB3-206ENST00000477489 COL9A3Q14050 684 aaPredicted RBP7.76□□□□□ -1.17
LDB3-206ENST00000477489 CTR9Q6PD62 1173 aa7.76□□□□□ -1.17
LDB3-206ENST00000477489 CYB5R4Q7L1T6 521 aa7.76□□□□□ -1.17
LDB3-206ENST00000477489 CDC37L1Q7L3B6 337 aa7.76□□□□□ -1.17
LDB3-206ENST00000477489 USP48Q86UV5 1035 aa7.76□□□□□ -1.17
LDB3-206ENST00000477489 TXNRD3Q86VQ6 643 aa7.76□□□□□ -1.17
LDB3-206ENST00000477489 TRIM22Q8IYM9 498 aa7.76□□□□□ -1.17
LDB3-206ENST00000477489 FBXO18Q8NFZ0 1043 aa7.76□□□□□ -1.17
LDB3-206ENST00000477489 ANKS1AQ92625 1134 aa7.76□□□□□ -1.17
LDB3-206ENST00000477489 C8orf76Q96K31 380 aa7.76□□□□□ -1.17
LDB3-206ENST00000477489 LRRC2Q9BYS8 371 aa7.76□□□□□ -1.17
LDB3-206ENST00000477489 VPS33BQ9H267 617 aa7.76□□□□□ -1.17
LDB3-206ENST00000477489 TCP11L1Q9NUJ3 509 aa7.76□□□□□ -1.17
LDB3-206ENST00000477489 ORC3Q9UBD5 711 aaPredicted RBP7.76□□□□□ -1.17
LDB3-206ENST00000477489 MKRN1Q9UHC7 482 aaKnown RBP7.76□□□□□ -1.17
LDB3-206ENST00000477489 BRPF3Q9ULD4 1205 aa7.76□□□□□ -1.17
LDB3-206ENST00000477489 IQSEC3Q9UPP2 1182 aaPredicted RBP7.76□□□□□ -1.17
LDB3-206ENST00000477489 PSME4Q14997 1843 aa7.75□□□□□ -1.17
LDB3-206ENST00000477489 GOLGA8AA7E2F4 631 aa7.75□□□□□ -1.17
LDB3-206ENST00000477489 C6orf229H3BNL8 230 aa7.75□□□□□ -1.17
LDB3-206ENST00000477489 PRKAB2O43741 272 aa7.75□□□□□ -1.17
LDB3-206ENST00000477489 JAK2O60674 1132 aa7.75□□□□□ -1.17
LDB3-206ENST00000477489 IARSP41252 1262 aaKnown RBP7.75□□□□□ -1.17
LDB3-206ENST00000477489 DNM1Q05193 864 aaKnown RBP7.75□□□□□ -1.17
LDB3-206ENST00000477489 TRIM29Q14134 588 aa7.75□□□□□ -1.17
LDB3-206ENST00000477489 SEC23AQ15436 765 aa7.75□□□□□ -1.17
LDB3-206ENST00000477489 NTRK3Q16288 839 aa7.75□□□□□ -1.17
LDB3-206ENST00000477489 MFSD14BQ5SR56 506 aa7.75□□□□□ -1.17
LDB3-206ENST00000477489 CCDC183Q5T5S1 534 aa7.75□□□□□ -1.17
LDB3-206ENST00000477489 C12orf60Q5U649 245 aa7.75□□□□□ -1.17
LDB3-206ENST00000477489 DPP8Q6V1X1 898 aaPredicted RBP7.75□□□□□ -1.17
LDB3-206ENST00000477489 NFXL1Q6ZNB6 911 aa7.75□□□□□ -1.17
LDB3-206ENST00000477489 CATIPQ7Z7H3 387 aa7.75□□□□□ -1.17
LDB3-206ENST00000477489 DGKHQ86XP1 1220 aa7.75□□□□□ -1.17
LDB3-206ENST00000477489 CCDC24Q8N4L8 307 aa7.75□□□□□ -1.17
LDB3-206ENST00000477489 JMYQ8N9B5 988 aa7.75□□□□□ -1.17
LDB3-206ENST00000477489 GPT2Q8TD30 523 aa7.75□□□□□ -1.17
LDB3-206ENST00000477489 SDR42E1Q8WUS8 393 aa7.75□□□□□ -1.17
LDB3-206ENST00000477489 ZSCAN10Q96SZ4 725 aaPredicted RBP7.75□□□□□ -1.17
LDB3-206ENST00000477489 RNF26Q9BY78 433 aaPredicted RBP7.75□□□□□ -1.17
LDB3-206ENST00000477489 AATFQ9NY61 560 aaKnown RBP eCLIP7.75□□□□□ -1.17
LDB3-206ENST00000477489 POLLQ9UGP5 575 aa7.75□□□□□ -1.17
LDB3-206ENST00000477489 MORC2Q9Y6X9 1032 aaPredicted RBP7.75□□□□□ -1.17
LDB3-206ENST00000477489 MYH6P13533 1939 aa7.75□□□□□ -1.17
LDB3-206ENST00000477489 ECM29Q5VYK3 1845 aa7.75□□□□□ -1.17
LDB3-206ENST00000477489 MYH1P12882 1939 aa7.74□□□□□ -1.17
LDB3-206ENST00000477489 GOLGA6L4A6NEF3 574 aa7.74□□□□□ -1.17
LDB3-206ENST00000477489 MINDY4BA8MYZ0 360 aa7.74□□□□□ -1.17
LDB3-206ENST00000477489 USP17L12C9JPN9 530 aa7.74□□□□□ -1.17
LDB3-206ENST00000477489 USP17L21D6R901 530 aa7.74□□□□□ -1.17
LDB3-206ENST00000477489 RNF40O75150 1001 aa7.74□□□□□ -1.17
LDB3-206ENST00000477489 DEXIO95424 95 aa7.74□□□□□ -1.17
LDB3-206ENST00000477489 FMNL1O95466 1100 aaPredicted RBP7.74□□□□□ -1.17
LDB3-206ENST00000477489 YEATS4O95619 227 aa7.74□□□□□ -1.17
LDB3-206ENST00000477489 FDPSP14324 419 aaKnown RBP7.74□□□□□ -1.17
LDB3-206ENST00000477489 XBP1P17861 261 aa7.74□□□□□ -1.17
LDB3-206ENST00000477489 USP5P45974 858 aa7.74□□□□□ -1.17
LDB3-206ENST00000477489 GNAQP50148 359 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms