RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 GTF3C2Q8WUA4 911 aaPredicted RBP8.17□□□□□ -1.1
RTFDC1-206ENST00000477485 DBNDD2Q9BQY9 259 aa8.17□□□□□ -1.1
RTFDC1-206ENST00000477485 BCL11AQ9H165 835 aa8.17□□□□□ -1.1
RTFDC1-206ENST00000477485 DNAJC18Q9H819 358 aa8.17□□□□□ -1.1
RTFDC1-206ENST00000477485 PRDM5Q9NQX1 630 aaPredicted RBP8.17□□□□□ -1.1
RTFDC1-206ENST00000477485 ATP11BQ9Y2G3 1177 aa8.17□□□□□ -1.1
RTFDC1-206ENST00000477485 LAMA3Q16787 3333 aa8.17□□□□□ -1.1
RTFDC1-206ENST00000477485 BAZ2AQ9UIF9 1905 aaKnown RBP8.17□□□□□ -1.1
RTFDC1-206ENST00000477485 USP17L15C9J2P7 530 aa8.16□□□□□ -1.1
RTFDC1-206ENST00000477485 USP17L13C9JLJ4 530 aa8.16□□□□□ -1.1
RTFDC1-206ENST00000477485 USP17L11C9JVI0 530 aa8.16□□□□□ -1.1
RTFDC1-206ENST00000477485 USP17L18D6R9N7 530 aa8.16□□□□□ -1.1
RTFDC1-206ENST00000477485 USP17L22D6RA61 530 aa8.16□□□□□ -1.1
RTFDC1-206ENST00000477485 USP17L17D6RBQ6 530 aa8.16□□□□□ -1.1
RTFDC1-206ENST00000477485 USP17L19D6RCP7 530 aa8.16□□□□□ -1.1
RTFDC1-206ENST00000477485 USP17L20D6RJB6 530 aa8.16□□□□□ -1.1
RTFDC1-206ENST00000477485 MPHOSPH10O00566 681 aaKnown RBP8.16□□□□□ -1.1
RTFDC1-206ENST00000477485 IDH1O75874 414 aaKnown RBP8.16□□□□□ -1.1
RTFDC1-206ENST00000477485 CYP2E1P05181 493 aaPredicted RBP8.16□□□□□ -1.1
RTFDC1-206ENST00000477485 COL6A1P12109 1028 aa8.16□□□□□ -1.1
RTFDC1-206ENST00000477485 ZAP70P43403 619 aa8.16□□□□□ -1.1
RTFDC1-206ENST00000477485 RARSP54136 660 aaKnown RBP8.16□□□□□ -1.1
RTFDC1-206ENST00000477485 USP17L24Q0WX57 530 aa8.16□□□□□ -1.1
RTFDC1-206ENST00000477485 MTX1Q13505 466 aa8.16□□□□□ -1.1
RTFDC1-206ENST00000477485 TNNI3KQ59H18 835 aa8.16□□□□□ -1.1
RTFDC1-206ENST00000477485 MORN1Q5T089 497 aa8.16□□□□□ -1.1
RTFDC1-206ENST00000477485 ANO1Q5XXA6 986 aa8.16□□□□□ -1.1
RTFDC1-206ENST00000477485 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.16□□□□□ -1.1
RTFDC1-206ENST00000477485 EDC3Q96F86 508 aaKnown RBP8.16□□□□□ -1.1
RTFDC1-206ENST00000477485 EMILIN3Q9NT22 766 aa8.16□□□□□ -1.1
RTFDC1-206ENST00000477485 TNNQ9UQP3 1299 aa8.16□□□□□ -1.1
RTFDC1-206ENST00000477485 FPGT-TNNI3KV9GXZ4 949 aa8.16□□□□□ -1.1
RTFDC1-206ENST00000477485 PARP14Q460N5 1801 aa8.15□□□□□ -1.1
RTFDC1-206ENST00000477485 ZNF236Q9UL36 1845 aa8.15□□□□□ -1.1
RTFDC1-206ENST00000477485 IPO8O15397 1037 aaKnown RBP8.15□□□□□ -1.1
RTFDC1-206ENST00000477485 CYP2C19P33261 490 aa8.15□□□□□ -1.1
RTFDC1-206ENST00000477485 USP14P54578 494 aa8.15□□□□□ -1.1
RTFDC1-206ENST00000477485 PLS1Q14651 629 aa8.15□□□□□ -1.1
RTFDC1-206ENST00000477485 ABCB5Q2M3G0 1257 aa8.15□□□□□ -1.1
RTFDC1-206ENST00000477485 CERKLQ49MI3 558 aaPredicted RBP8.15□□□□□ -1.1
RTFDC1-206ENST00000477485 GJC2Q5T442 439 aaPredicted RBP8.15□□□□□ -1.1
RTFDC1-206ENST00000477485 LHX8Q68G74 356 aa8.15□□□□□ -1.1
RTFDC1-206ENST00000477485 DPP9Q86TI2 863 aa8.15□□□□□ -1.1
RTFDC1-206ENST00000477485 COL25A1Q9BXS0 654 aaPredicted RBP8.15□□□□□ -1.1
RTFDC1-206ENST00000477485 TANGO6Q9C0B7 1094 aa8.15□□□□□ -1.1
RTFDC1-206ENST00000477485 C1orf115Q9H7X2 142 aa8.15□□□□□ -1.1
RTFDC1-206ENST00000477485 CABP5Q9NP86 173 aa8.15□□□□□ -1.1
RTFDC1-206ENST00000477485 PIH1D3Q9NQM4 214 aaKnown RBP8.15□□□□□ -1.1
RTFDC1-206ENST00000477485 GINM1Q9NU53 330 aa8.15□□□□□ -1.1
RTFDC1-206ENST00000477485 FLRT1Q9NZU1 646 aa8.15□□□□□ -1.1
RTFDC1-206ENST00000477485 DDX20Q9UHI6 824 aaKnown RBP8.15□□□□□ -1.1
RTFDC1-206ENST00000477485 RABGAP1Q9Y3P9 1069 aa8.15□□□□□ -1.1
RTFDC1-206ENST00000477485 MYH7P12883 1935 aa8.15□□□□□ -1.11
RTFDC1-206ENST00000477485 A0A0G2JMZ2 1700 aa8.15□□□□□ -1.11
RTFDC1-206ENST00000477485 SMCHD1A6NHR9 2005 aa8.14□□□□□ -1.11
RTFDC1-206ENST00000477485 SLC15A5A6NIM6 579 aa8.14□□□□□ -1.11
RTFDC1-206ENST00000477485 KBTBD13C9JR72 458 aa8.14□□□□□ -1.11
RTFDC1-206ENST00000477485 MSCO60682 206 aa8.14□□□□□ -1.11
RTFDC1-206ENST00000477485 SURF6O75683 361 aaKnown RBP8.14□□□□□ -1.11
RTFDC1-206ENST00000477485 BCAR3O75815 825 aa8.14□□□□□ -1.11
RTFDC1-206ENST00000477485 TRIM27P14373 513 aa8.14□□□□□ -1.11
RTFDC1-206ENST00000477485 VCAM1P19320 739 aa8.14□□□□□ -1.11
RTFDC1-206ENST00000477485 PTPREP23469 700 aa8.14□□□□□ -1.11
RTFDC1-206ENST00000477485 RTP1P59025 263 aa8.14□□□□□ -1.11
RTFDC1-206ENST00000477485 PPP4CP60510 307 aa8.14□□□□□ -1.11
RTFDC1-206ENST00000477485 MAGEB6Q8N7X4 407 aa8.14□□□□□ -1.11
RTFDC1-206ENST00000477485 NPLOC4Q8TAT6 608 aa8.14□□□□□ -1.11
RTFDC1-206ENST00000477485 ARHGAP45Q92619 1136 aa8.14□□□□□ -1.11
RTFDC1-206ENST00000477485 LPAR1Q92633 364 aa8.14□□□□□ -1.11
RTFDC1-206ENST00000477485 USP6NLQ92738 828 aa8.14□□□□□ -1.11
RTFDC1-206ENST00000477485 CCDC8Q9H0W5 538 aaPredicted RBP8.14□□□□□ -1.11
RTFDC1-206ENST00000477485 RPAP3Q9H6T3 665 aaPredicted RBP8.14□□□□□ -1.11
RTFDC1-206ENST00000477485 SERPINB13Q9UIV8 391 aa8.14□□□□□ -1.11
RTFDC1-206ENST00000477485 DNM1LO00429 736 aa8.13□□□□□ -1.11
RTFDC1-206ENST00000477485 CNMDO75829 334 aa8.13□□□□□ -1.11
RTFDC1-206ENST00000477485 POLR3DP05423 398 aaPredicted RBP8.13□□□□□ -1.11
RTFDC1-206ENST00000477485 CATSPERGQ6ZRH7 1159 aa8.13□□□□□ -1.11
RTFDC1-206ENST00000477485 TTC6Q86TZ1 520 aa8.13□□□□□ -1.11
RTFDC1-206ENST00000477485 TRMT2AQ8IZ69 625 aaKnown RBP8.13□□□□□ -1.11
RTFDC1-206ENST00000477485 ACER1Q8TDN7 264 aa8.13□□□□□ -1.11
RTFDC1-206ENST00000477485 FERMT2Q96AC1 680 aa8.13□□□□□ -1.11
RTFDC1-206ENST00000477485 GUCD1Q96NT3 240 aa8.13□□□□□ -1.11
RTFDC1-206ENST00000477485 TLR7Q9NYK1 1049 aaKnown RBP8.13□□□□□ -1.11
RTFDC1-206ENST00000477485 BTBD7Q9P203 1132 aa8.13□□□□□ -1.11
RTFDC1-206ENST00000477485 SPDYE16A6NNV3 312 aaPredicted RBP8.12□□□□□ -1.11
RTFDC1-206ENST00000477485 RAD21O60216 631 aa8.12□□□□□ -1.11
RTFDC1-206ENST00000477485 ADORA2AP29274 412 aa8.12□□□□□ -1.11
RTFDC1-206ENST00000477485 MAP3K12Q12852 859 aa8.12□□□□□ -1.11
RTFDC1-206ENST00000477485 GRB14Q14449 540 aa8.12□□□□□ -1.11
RTFDC1-206ENST00000477485 TRIM60Q495X7 471 aa8.12□□□□□ -1.11
RTFDC1-206ENST00000477485 POTEEQ6S8J3 1075 aa8.12□□□□□ -1.11
RTFDC1-206ENST00000477485 NCAPG2Q86XI2 1143 aa8.12□□□□□ -1.11
RTFDC1-206ENST00000477485 FTSJ3Q8IY81 847 aaKnown RBP8.12□□□□□ -1.11
RTFDC1-206ENST00000477485 TMEM57Q8N5G2 664 aa8.12□□□□□ -1.11
RTFDC1-206ENST00000477485 ARRDC4Q8NCT1 418 aa8.12□□□□□ -1.11
RTFDC1-206ENST00000477485 MAFAQ8NHW3 353 aaPredicted RBP8.12□□□□□ -1.11
RTFDC1-206ENST00000477485 BADQ92934 168 aa8.12□□□□□ -1.11
RTFDC1-206ENST00000477485 C12orf42Q96LP6 360 aa8.12□□□□□ -1.11
RTFDC1-206ENST00000477485 KIAA1683Q9H0B3 1180 aa8.12□□□□□ -1.11
RTFDC1-206ENST00000477485 GPR108Q9NPR9 543 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms