RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 NKX2-3Q8TAU0 364 aa20.68■□□□□ 0.9
SMARCD3-210ENST00000477169 FSD1Q9BTV5 496 aa20.68■□□□□ 0.9
SMARCD3-210ENST00000477169 CABP5Q9NP86 173 aa20.68■□□□□ 0.9
SMARCD3-210ENST00000477169 MCM9Q9NXL9 1143 aa20.68■□□□□ 0.9
SMARCD3-210ENST00000477169 SHMT1P34896 483 aa20.67■□□□□ 0.9
SMARCD3-210ENST00000477169 GABPAQ06546 454 aa20.67■□□□□ 0.9
SMARCD3-210ENST00000477169 UBE3CQ15386 1083 aa20.67■□□□□ 0.9
SMARCD3-210ENST00000477169 ABCB5Q2M3G0 1257 aa20.67■□□□□ 0.9
SMARCD3-210ENST00000477169 LCORLQ8N3X6 602 aa20.67■□□□□ 0.9
SMARCD3-210ENST00000477169 P2RX7Q99572 595 aaKnown RBP20.67■□□□□ 0.9
SMARCD3-210ENST00000477169 DCP1AQ9NPI6 582 aaPredicted RBP20.67■□□□□ 0.9
SMARCD3-210ENST00000477169 EMILIN3Q9NT22 766 aa20.67■□□□□ 0.9
SMARCD3-210ENST00000477169 MORF4L1Q9UBU8 362 aa20.67■□□□□ 0.9
SMARCD3-210ENST00000477169 TRIM6-TRIM34B2RNG4 842 aa20.66■□□□□ 0.9
SMARCD3-210ENST00000477169 RNF113AO15541 343 aaKnown RBP20.66■□□□□ 0.9
SMARCD3-210ENST00000477169 GJB1P08034 283 aa20.66■□□□□ 0.9
SMARCD3-210ENST00000477169 CCL5P13501 91 aa20.66■□□□□ 0.9
SMARCD3-210ENST00000477169 GSPT1P15170 499 aaKnown RBP20.66■□□□□ 0.9
SMARCD3-210ENST00000477169 RAB3GAP1Q15042 981 aa20.66■□□□□ 0.9
SMARCD3-210ENST00000477169 SDR42E1Q8WUS8 393 aa20.66■□□□□ 0.9
SMARCD3-210ENST00000477169 RILPL2Q969X0 211 aa20.66■□□□□ 0.9
SMARCD3-210ENST00000477169 C12orf42Q96LP6 360 aa20.66■□□□□ 0.9
SMARCD3-210ENST00000477169 RNF208Q9H0X6 261 aa20.66■□□□□ 0.9
SMARCD3-210ENST00000477169 TAOK2Q9UL54 1235 aa20.66■□□□□ 0.9
SMARCD3-210ENST00000477169 DOCK3Q8IZD9 2030 aa20.65■□□□□ 0.9
SMARCD3-210ENST00000477169 ZFYP08048 801 aaPredicted RBP20.65■□□□□ 0.9
SMARCD3-210ENST00000477169 USP14P54578 494 aa20.65■□□□□ 0.9
SMARCD3-210ENST00000477169 HERVK_113P62684 666 aa20.65■□□□□ 0.9
SMARCD3-210ENST00000477169 ARMT1Q9H993 441 aa20.65■□□□□ 0.9
SMARCD3-210ENST00000477169 ATP8A2Q9NTI2 1148 aa20.65■□□□□ 0.9
SMARCD3-210ENST00000477169 DDX60LQ5H9U9 1706 aaKnown RBP20.64■□□□□ 0.9
SMARCD3-210ENST00000477169 GJA8P48165 433 aa20.64■□□□□ 0.89
SMARCD3-210ENST00000477169 LRRFIP1Q32MZ4 808 aaKnown RBP20.64■□□□□ 0.89
SMARCD3-210ENST00000477169 GPRC5AQ8NFJ5 357 aa20.64■□□□□ 0.89
SMARCD3-210ENST00000477169 GTF3C2Q8WUA4 911 aaPredicted RBP20.64■□□□□ 0.89
SMARCD3-210ENST00000477169 FEZ1Q99689 392 aa20.64■□□□□ 0.89
SMARCD3-210ENST00000477169 NAV1Q8NEY1 1877 aa20.64■□□□□ 0.89
SMARCD3-210ENST00000477169 MBD4O95243 580 aa20.63■□□□□ 0.89
SMARCD3-210ENST00000477169 ELNP15502 786 aa20.63■□□□□ 0.89
SMARCD3-210ENST00000477169 APPBP2Q92624 585 aa20.63■□□□□ 0.89
SMARCD3-210ENST00000477169 OSBP2Q969R2 916 aa20.63■□□□□ 0.89
SMARCD3-210ENST00000477169 KIAA1683Q9H0B3 1180 aa20.63■□□□□ 0.89
SMARCD3-210ENST00000477169 PUS7LQ9H0K6 701 aaKnown RBP20.63■□□□□ 0.89
SMARCD3-210ENST00000477169 RBPJLQ9UBG7 517 aa20.63■□□□□ 0.89
SMARCD3-210ENST00000477169 GJD2Q9UKL4 321 aa20.63■□□□□ 0.89
SMARCD3-210ENST00000477169 USP17L15C9J2P7 530 aa20.62■□□□□ 0.89
SMARCD3-210ENST00000477169 USP17L13C9JLJ4 530 aa20.62■□□□□ 0.89
SMARCD3-210ENST00000477169 USP17L11C9JVI0 530 aa20.62■□□□□ 0.89
SMARCD3-210ENST00000477169 USP17L18D6R9N7 530 aa20.62■□□□□ 0.89
SMARCD3-210ENST00000477169 USP17L22D6RA61 530 aa20.62■□□□□ 0.89
SMARCD3-210ENST00000477169 USP17L17D6RBQ6 530 aa20.62■□□□□ 0.89
SMARCD3-210ENST00000477169 USP17L19D6RCP7 530 aa20.62■□□□□ 0.89
SMARCD3-210ENST00000477169 USP17L20D6RJB6 530 aa20.62■□□□□ 0.89
SMARCD3-210ENST00000477169 PRKAB2O43741 272 aa20.62■□□□□ 0.89
SMARCD3-210ENST00000477169 INHAP05111 366 aa20.62■□□□□ 0.89
SMARCD3-210ENST00000477169 SDSP20132 328 aa20.62■□□□□ 0.89
SMARCD3-210ENST00000477169 GUCY1A2P33402 732 aa20.62■□□□□ 0.89
SMARCD3-210ENST00000477169 USP17L24Q0WX57 530 aa20.62■□□□□ 0.89
SMARCD3-210ENST00000477169 ZMYM1Q5SVZ6 1142 aa20.62■□□□□ 0.89
SMARCD3-210ENST00000477169 TICAM2Q86XR7 235 aa20.62■□□□□ 0.89
SMARCD3-210ENST00000477169 SHISA4Q96DD7 197 aa20.62■□□□□ 0.89
SMARCD3-210ENST00000477169 UNC93B1Q9H1C4 597 aa20.62■□□□□ 0.89
SMARCD3-210ENST00000477169 TXNRD2Q9NNW7 524 aa20.62■□□□□ 0.89
SMARCD3-210ENST00000477169 SWAP70Q9UH65 585 aa20.62■□□□□ 0.89
SMARCD3-210ENST00000477169 CAPN2P17655 700 aa20.61■□□□□ 0.89
SMARCD3-210ENST00000477169 EVX2Q03828 476 aa20.61■□□□□ 0.89
SMARCD3-210ENST00000477169 ZYXQ15942 572 aaKnown RBP20.61■□□□□ 0.89
SMARCD3-210ENST00000477169 ACER1Q8TDN7 264 aa20.61■□□□□ 0.89
SMARCD3-210ENST00000477169 SGPL1O95470 568 aa20.6■□□□□ 0.89
SMARCD3-210ENST00000477169 CYP2D6P10635 497 aa20.6■□□□□ 0.89
SMARCD3-210ENST00000477169 SEPT2Q15019 361 aa20.6■□□□□ 0.89
SMARCD3-210ENST00000477169 Q3C1V9 767 aa20.6■□□□□ 0.89
SMARCD3-210ENST00000477169 CATSPERGQ6ZRH7 1159 aa20.6■□□□□ 0.89
SMARCD3-210ENST00000477169 U2AF1L4Q8WU68 220 aaKnown RBP20.6■□□□□ 0.89
SMARCD3-210ENST00000477169 M0R2C6 588 aa20.59■□□□□ 0.89
SMARCD3-210ENST00000477169 MPHOSPH10O00566 681 aaKnown RBP20.59■□□□□ 0.89
SMARCD3-210ENST00000477169 MAPK4P31152 587 aa20.59■□□□□ 0.89
SMARCD3-210ENST00000477169 ERVK-9P63128 1117 aa20.59■□□□□ 0.89
SMARCD3-210ENST00000477169 ERVK-24P63145 666 aa20.59■□□□□ 0.89
SMARCD3-210ENST00000477169 AMOTL1Q8IY63 956 aa20.59■□□□□ 0.89
SMARCD3-210ENST00000477169 DDRGK1Q96HY6 314 aa20.59■□□□□ 0.89
SMARCD3-210ENST00000477169 SEC62Q99442 399 aaKnown RBP20.59■□□□□ 0.89
SMARCD3-210ENST00000477169 PEX10O60683 326 aa20.58■□□□□ 0.89
SMARCD3-210ENST00000477169 VCAM1P19320 739 aa20.58■□□□□ 0.89
SMARCD3-210ENST00000477169 C12orf60Q5U649 245 aa20.58■□□□□ 0.89
SMARCD3-210ENST00000477169 POTEEQ6S8J3 1075 aa20.58■□□□□ 0.89
SMARCD3-210ENST00000477169 TMEM179Q6ZVK1 233 aa20.58■□□□□ 0.89
SMARCD3-210ENST00000477169 DYNLL2Q96FJ2 89 aa20.58■□□□□ 0.89
SMARCD3-210ENST00000477169 FAM227BQ96M60 508 aa20.58■□□□□ 0.89
SMARCD3-210ENST00000477169 STRBPQ96SI9 672 aaKnown RBP20.58■□□□□ 0.89
SMARCD3-210ENST00000477169 NUDT12Q9BQG2 462 aa20.58■□□□□ 0.89
SMARCD3-210ENST00000477169 RABGAP1Q9Y3P9 1069 aa20.58■□□□□ 0.89
SMARCD3-210ENST00000477169 SLC4A4Q9Y6R1 1079 aa20.58■□□□□ 0.89
SMARCD3-210ENST00000477169 USP17L12C9JPN9 530 aa20.57■□□□□ 0.88
SMARCD3-210ENST00000477169 USP17L21D6R901 530 aa20.57■□□□□ 0.88
SMARCD3-210ENST00000477169 HMGCRP04035 888 aa20.57■□□□□ 0.88
SMARCD3-210ENST00000477169 NMIQ13287 307 aaPredicted RBP20.57■□□□□ 0.88
SMARCD3-210ENST00000477169 LBX2Q6XYB7 198 aa20.57■□□□□ 0.88
SMARCD3-210ENST00000477169 UBE2Q1Q7Z7E8 422 aa20.57■□□□□ 0.88
SMARCD3-210ENST00000477169 CCAR1Q8IX12 1150 aaKnown RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 284.1 ms