RNA–Protein interactions for RNA: ENST00000476983.5

CLK2-205, Transcript of CDC like kinase 2, humanhuman

TSL 1 (best)

Gene CLK2, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-205ENST00000476983 NID2Q14112 1375 aa23.15■■□□□ 1.3
CLK2-205ENST00000476983 DHX16O60231 1041 aaKnown RBP23.15■■□□□ 1.3
CLK2-205ENST00000476983 RAB3GAP1Q15042 981 aa23.15■■□□□ 1.3
CLK2-205ENST00000476983 DPY19L2Q6NUT2 758 aa23.15■■□□□ 1.3
CLK2-205ENST00000476983 TATDN1Q6P1N9 297 aa23.15■■□□□ 1.3
CLK2-205ENST00000476983 PGAP2Q9UHJ9 254 aa23.15■■□□□ 1.3
CLK2-205ENST00000476983 MTMR7Q9Y216 660 aa23.15■■□□□ 1.3
CLK2-205ENST00000476983 NUCB2P80303 420 aa23.14■■□□□ 1.29
CLK2-205ENST00000476983 MIGA2Q7L4E1 593 aa23.14■■□□□ 1.29
CLK2-205ENST00000476983 TMEM47Q9BQJ4 181 aa23.14■■□□□ 1.29
CLK2-205ENST00000476983 GGA3Q9NZ52 723 aa23.14■■□□□ 1.29
CLK2-205ENST00000476983 DDAH1O94760 285 aa23.13■■□□□ 1.29
CLK2-205ENST00000476983 FOSBP53539 338 aa23.13■■□□□ 1.29
CLK2-205ENST00000476983 TROAPQ12815 778 aa23.13■■□□□ 1.29
CLK2-205ENST00000476983 FANCBQ8NB91 859 aa23.13■■□□□ 1.29
CLK2-205ENST00000476983 PNMA1Q8ND90 353 aa23.13■■□□□ 1.29
CLK2-205ENST00000476983 ANKS1AQ92625 1134 aa23.13■■□□□ 1.29
CLK2-205ENST00000476983 CCDC17Q96LX7 622 aa23.13■■□□□ 1.29
CLK2-205ENST00000476983 HERC5Q9UII4 1024 aaKnown RBP23.13■■□□□ 1.29
CLK2-205ENST00000476983 ZDHHC9Q9Y397 364 aa23.13■■□□□ 1.29
CLK2-205ENST00000476983 IGKV6D-41A0A0C4DH26 115 aa23.13■■□□□ 1.29
CLK2-205ENST00000476983 SYT1P21579 422 aa23.13■■□□□ 1.29
CLK2-205ENST00000476983 RRP1BQ14684 758 aaKnown RBP23.13■■□□□ 1.29
CLK2-205ENST00000476983 CMTR1Q8N1G2 835 aaKnown RBP23.13■■□□□ 1.29
CLK2-205ENST00000476983 FAM184AQ8NB25 1140 aa23.13■■□□□ 1.29
CLK2-205ENST00000476983 ADARB2Q9NS39 739 aaKnown RBP23.13■■□□□ 1.29
CLK2-205ENST00000476983 RCAN1P53805 252 aa23.12■■□□□ 1.29
CLK2-205ENST00000476983 HMGN5P82970 282 aaKnown RBP23.12■■□□□ 1.29
CLK2-205ENST00000476983 PHKBQ93100 1093 aa23.12■■□□□ 1.29
CLK2-205ENST00000476983 DEFB129Q9H1M3 183 aa23.12■■□□□ 1.29
CLK2-205ENST00000476983 MTMR4Q9NYA4 1195 aa23.12■■□□□ 1.29
CLK2-205ENST00000476983 LARP1BQ659C4 914 aaKnown RBP23.11■■□□□ 1.29
CLK2-205ENST00000476983 TEPSINQ96N21 525 aa23.11■■□□□ 1.29
CLK2-205ENST00000476983 STX6O43752 255 aa23.11■■□□□ 1.29
CLK2-205ENST00000476983 CALM1P0DP23 149 aa23.11■■□□□ 1.29
CLK2-205ENST00000476983 CALM2P0DP24 149 aa23.11■■□□□ 1.29
CLK2-205ENST00000476983 CALM3P0DP25 149 aa23.11■■□□□ 1.29
CLK2-205ENST00000476983 FDPSP14324 419 aaKnown RBP23.11■■□□□ 1.29
CLK2-205ENST00000476983 ATP2B2Q01814 1243 aa23.11■■□□□ 1.29
CLK2-205ENST00000476983 NTRK3Q16288 839 aa23.11■■□□□ 1.29
CLK2-205ENST00000476983 ABCB5Q2M3G0 1257 aa23.11■■□□□ 1.29
CLK2-205ENST00000476983 CPLX2Q6PUV4 134 aaKnown RBP23.11■■□□□ 1.29
CLK2-205ENST00000476983 APOBEC3FQ8IUX4 373 aaKnown RBP23.11■■□□□ 1.29
CLK2-205ENST00000476983 CCDC82Q8N4S0 544 aa23.11■■□□□ 1.29
CLK2-205ENST00000476983 TNPO1Q92973 898 aaKnown RBP23.11■■□□□ 1.29
CLK2-205ENST00000476983 MYH4Q9Y623 1939 aa23.11■■□□□ 1.29
CLK2-205ENST00000476983 VPS37CA5D8V6 355 aaPredicted RBP23.1■■□□□ 1.29
CLK2-205ENST00000476983 JAG1P78504 1218 aa23.1■■□□□ 1.29
CLK2-205ENST00000476983 RASGRP2Q7LDG7 609 aa23.1■■□□□ 1.29
CLK2-205ENST00000476983 LRRC47Q8N1G4 583 aaKnown RBP23.1■■□□□ 1.29
CLK2-205ENST00000476983 ORC3Q9UBD5 711 aaPredicted RBP23.1■■□□□ 1.29
CLK2-205ENST00000476983 TAOK2Q9UL54 1235 aa23.1■■□□□ 1.29
CLK2-205ENST00000476983 CDKL5O76039 1030 aa23.09■■□□□ 1.29
CLK2-205ENST00000476983 PLEKHA8P1O95397 391 aa23.09■■□□□ 1.29
CLK2-205ENST00000476983 BRD1O95696 1058 aa23.09■■□□□ 1.29
CLK2-205ENST00000476983 TOP1P11387 765 aaKnown RBP23.09■■□□□ 1.29
CLK2-205ENST00000476983 SEPT2Q15019 361 aa23.09■■□□□ 1.29
CLK2-205ENST00000476983 PRAMEF18Q5VWM3 479 aa23.09■■□□□ 1.29
CLK2-205ENST00000476983 CTCFLQ8NI51 663 aaPredicted RBP23.09■■□□□ 1.29
CLK2-205ENST00000476983 CLIP2Q9UDT6 1046 aa23.09■■□□□ 1.29
CLK2-205ENST00000476983 POLR2AP24928 1970 aaKnown RBP23.09■■□□□ 1.29
CLK2-205ENST00000476983 GLTPD2A6NH11 291 aa23.09■■□□□ 1.29
CLK2-205ENST00000476983 GH2P01242 217 aa23.09■■□□□ 1.29
CLK2-205ENST00000476983 NOVP48745 357 aa23.09■■□□□ 1.29
CLK2-205ENST00000476983 L3MBTL3Q96JM7 780 aaPredicted RBP23.09■■□□□ 1.29
CLK2-205ENST00000476983 SLC26A6Q9BXS9 759 aa23.09■■□□□ 1.29
CLK2-205ENST00000476983 ZC3H4Q9UPT8 1303 aaKnown RBP23.09■■□□□ 1.29
CLK2-205ENST00000476983 CCDC196A0A1B0GTZ2 297 aa23.08■■□□□ 1.29
CLK2-205ENST00000476983 TTLL1O95922 423 aa23.08■■□□□ 1.29
CLK2-205ENST00000476983 NBPF12Q5TAG4 269 aaPredicted RBP23.08■■□□□ 1.29
CLK2-205ENST00000476983 RBM28Q9NW13 759 aaKnown RBP23.08■■□□□ 1.29
CLK2-205ENST00000476983 TBC1D12O60347 775 aa23.07■■□□□ 1.28
CLK2-205ENST00000476983 PDCP20941 246 aa23.07■■□□□ 1.28
CLK2-205ENST00000476983 GUCY1A2P33402 732 aa23.07■■□□□ 1.28
CLK2-205ENST00000476983 TMEM179Q6ZVK1 233 aa23.07■■□□□ 1.28
CLK2-205ENST00000476983 WDR33Q9C0J8 1336 aaKnown RBP23.07■■□□□ 1.28
CLK2-205ENST00000476983 UBE2Q2LH0YL09 131 aa23.07■■□□□ 1.28
CLK2-205ENST00000476983 IFNAR1P17181 557 aa23.07■■□□□ 1.28
CLK2-205ENST00000476983 SSRP1Q08945 709 aaKnown RBP23.07■■□□□ 1.28
CLK2-205ENST00000476983 CABP5Q9NP86 173 aa23.07■■□□□ 1.28
CLK2-205ENST00000476983 MTMR6Q9Y217 621 aa23.07■■□□□ 1.28
CLK2-205ENST00000476983 ICA1Q05084 483 aa23.06■■□□□ 1.28
CLK2-205ENST00000476983 GRM4Q14833 912 aa23.06■■□□□ 1.28
CLK2-205ENST00000476983 TMTC3Q6ZXV5 915 aa23.06■■□□□ 1.28
CLK2-205ENST00000476983 CDC37L1Q7L3B6 337 aa23.06■■□□□ 1.28
CLK2-205ENST00000476983 KIF3AQ9Y496 699 aa23.06■■□□□ 1.28
CLK2-205ENST00000476983 ZSCAN22P10073 491 aaPredicted RBP23.05■■□□□ 1.28
CLK2-205ENST00000476983 EEF2P13639 858 aaKnown RBP23.05■■□□□ 1.28
CLK2-205ENST00000476983 EPHX2P34913 555 aa23.05■■□□□ 1.28
CLK2-205ENST00000476983 PPP2R5BQ15173 497 aa23.05■■□□□ 1.28
CLK2-205ENST00000476983 NBPF11Q86T75 865 aa23.05■■□□□ 1.28
CLK2-205ENST00000476983 STAG2Q8N3U4 1231 aa23.05■■□□□ 1.28
CLK2-205ENST00000476983 AIFM3Q96NN9 605 aa23.05■■□□□ 1.28
CLK2-205ENST00000476983 KANSL2Q9H9L4 492 aa23.05■■□□□ 1.28
CLK2-205ENST00000476983 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.05■■□□□ 1.28
CLK2-205ENST00000476983 MYH6P13533 1939 aa23.05■■□□□ 1.28
CLK2-205ENST00000476983 ATAD5Q96QE3 1844 aa23.05■■□□□ 1.28
CLK2-205ENST00000476983 FMNL1O95466 1100 aaPredicted RBP23.05■■□□□ 1.28
CLK2-205ENST00000476983 GUCY1B3Q02153 619 aa23.05■■□□□ 1.28
CLK2-205ENST00000476983 MAD2L2Q9UI95 211 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms