RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 ZNF213O14771 459 aa9.54□□□□□ -0.88
VAPB-205ENST00000476395 PIGBQ92521 554 aa9.54□□□□□ -0.88
VAPB-205ENST00000476395 HINFPQ9BQA5 517 aa9.54□□□□□ -0.88
VAPB-205ENST00000476395 NAT10Q9H0A0 1025 aaKnown RBP9.54□□□□□ -0.88
VAPB-205ENST00000476395 BRMS1Q9HCU9 246 aa9.54□□□□□ -0.88
VAPB-205ENST00000476395 ROBO1Q9Y6N7 1651 aa9.54□□□□□ -0.88
VAPB-205ENST00000476395 MAP3K15Q6ZN16 1313 aa9.54□□□□□ -0.88
VAPB-205ENST00000476395 ABL1P00519 1130 aa9.54□□□□□ -0.88
VAPB-205ENST00000476395 PDE6AP16499 860 aa9.54□□□□□ -0.88
VAPB-205ENST00000476395 ITGA6P23229 1130 aa9.54□□□□□ -0.88
VAPB-205ENST00000476395 DNAJC10Q8IXB1 793 aa9.54□□□□□ -0.88
VAPB-205ENST00000476395 GRAMD1CQ8IYS0 662 aa9.54□□□□□ -0.88
VAPB-205ENST00000476395 MRPL44Q9H9J2 332 aaKnown RBP9.54□□□□□ -0.88
VAPB-205ENST00000476395 DUOX1Q9NRD9 1551 aa9.54□□□□□ -0.88
VAPB-205ENST00000476395 MYH14Q7Z406 1995 aaKnown RBP9.53□□□□□ -0.88
VAPB-205ENST00000476395 ADAMTS3O15072 1205 aa9.53□□□□□ -0.88
VAPB-205ENST00000476395 ACTN4O43707 911 aaKnown RBP9.53□□□□□ -0.88
VAPB-205ENST00000476395 CCDC172P0C7W6 258 aa9.53□□□□□ -0.88
VAPB-205ENST00000476395 POLD1P28340 1107 aa9.53□□□□□ -0.88
VAPB-205ENST00000476395 SYKP43405 635 aa9.53□□□□□ -0.88
VAPB-205ENST00000476395 UBE3CQ15386 1083 aa9.53□□□□□ -0.88
VAPB-205ENST00000476395 SLC9C2Q5TAH2 1124 aa9.53□□□□□ -0.88
VAPB-205ENST00000476395 KCNV1Q6PIU1 500 aa9.53□□□□□ -0.88
VAPB-205ENST00000476395 PDILTQ8N807 584 aa9.53□□□□□ -0.88
VAPB-205ENST00000476395 FAM204AQ9H8W3 233 aa9.53□□□□□ -0.88
VAPB-205ENST00000476395 LZTFL1Q9NQ48 299 aa9.53□□□□□ -0.88
VAPB-205ENST00000476395 PSD3Q9NYI0 1048 aa9.53□□□□□ -0.88
VAPB-205ENST00000476395 MAN1B1Q9UKM7 699 aa9.53□□□□□ -0.88
VAPB-205ENST00000476395 CEP83Q9Y592 693 aa9.53□□□□□ -0.88
VAPB-205ENST00000476395 LRRIQ3A6PVS8 624 aaPredicted RBP9.53□□□□□ -0.88
VAPB-205ENST00000476395 SSR1P43307 286 aaKnown RBP9.53□□□□□ -0.88
VAPB-205ENST00000476395 VSNL1P62760 191 aa9.53□□□□□ -0.88
VAPB-205ENST00000476395 CTDSPL2Q05D32 466 aa9.53□□□□□ -0.88
VAPB-205ENST00000476395 CCDC57Q2TAC2 916 aa9.53□□□□□ -0.88
VAPB-205ENST00000476395 CFAP100Q494V2 611 aa9.53□□□□□ -0.88
VAPB-205ENST00000476395 CCDC102BQ68D86 513 aa9.53□□□□□ -0.88
VAPB-205ENST00000476395 ADGRA1Q86SQ6 560 aa9.53□□□□□ -0.88
VAPB-205ENST00000476395 ELOA2Q8IYF1 753 aaPredicted RBP9.53□□□□□ -0.88
VAPB-205ENST00000476395 ZNF513Q8N8E2 541 aaPredicted RBP9.53□□□□□ -0.88
VAPB-205ENST00000476395 OXER1Q8TDS5 423 aa9.53□□□□□ -0.88
VAPB-205ENST00000476395 CCDC12Q8WUD4 166 aaPredicted RBP9.53□□□□□ -0.88
VAPB-205ENST00000476395 SUFUQ9UMX1 484 aa9.53□□□□□ -0.88
VAPB-205ENST00000476395 DOT1LQ8TEK3 1739 aa9.53□□□□□ -0.88
VAPB-205ENST00000476395 MYH8P13535 1937 aa9.53□□□□□ -0.88
VAPB-205ENST00000476395 FAM205CA6NFA0 338 aa9.53□□□□□ -0.88
VAPB-205ENST00000476395 GSG1L2A8MUP6 293 aa9.53□□□□□ -0.88
VAPB-205ENST00000476395 PRKAB2O43741 272 aa9.53□□□□□ -0.88
VAPB-205ENST00000476395 METAP2P50579 478 aaKnown RBP eCLIP9.53□□□□□ -0.88
VAPB-205ENST00000476395 MORC3Q14149 939 aa9.53□□□□□ -0.88
VAPB-205ENST00000476395 POLD4Q9HCU8 107 aa9.53□□□□□ -0.88
VAPB-205ENST00000476395 KIAA1551Q9HCM1 1747 aa9.52□□□□□ -0.88
VAPB-205ENST00000476395 STK36Q9NRP7 1315 aa9.52□□□□□ -0.88
VAPB-205ENST00000476395 BTBD18B2RXH4 712 aa9.52□□□□□ -0.89
VAPB-205ENST00000476395 FMNL1O95466 1100 aaPredicted RBP9.52□□□□□ -0.89
VAPB-205ENST00000476395 CD44P16070 742 aaKnown RBP9.52□□□□□ -0.89
VAPB-205ENST00000476395 TXLNAP40222 546 aa9.52□□□□□ -0.89
VAPB-205ENST00000476395 PBX1P40424 430 aa9.52□□□□□ -0.89
VAPB-205ENST00000476395 MYL5Q02045 173 aa9.52□□□□□ -0.89
VAPB-205ENST00000476395 ALX1Q15699 326 aa9.52□□□□□ -0.89
VAPB-205ENST00000476395 NPY5RQ15761 445 aa9.52□□□□□ -0.89
VAPB-205ENST00000476395 ZNF827Q17R98 1081 aa9.52□□□□□ -0.89
VAPB-205ENST00000476395 NOM1Q5C9Z4 860 aaKnown RBP9.52□□□□□ -0.89
VAPB-205ENST00000476395 GIGYF2Q6Y7W6 1299 aaKnown RBP9.52□□□□□ -0.89
VAPB-205ENST00000476395 EXOC8Q8IYI6 725 aa9.52□□□□□ -0.89
VAPB-205ENST00000476395 LAMB1P07942 1786 aa9.52□□□□□ -0.89
VAPB-205ENST00000476395 ATP8B1O43520 1251 aa9.52□□□□□ -0.89
VAPB-205ENST00000476395 PDE8BO95263 885 aa9.52□□□□□ -0.89
VAPB-205ENST00000476395 CTSWP56202 376 aa9.52□□□□□ -0.89
VAPB-205ENST00000476395 UBASH3AP57075 661 aa9.52□□□□□ -0.89
VAPB-205ENST00000476395 PIP4K2BP78356 416 aa9.52□□□□□ -0.89
VAPB-205ENST00000476395 FUT2Q10981 343 aa9.52□□□□□ -0.89
VAPB-205ENST00000476395 DPYDQ12882 1025 aa9.52□□□□□ -0.89
VAPB-205ENST00000476395 TTC19Q6DKK2 380 aaPredicted RBP9.52□□□□□ -0.89
VAPB-205ENST00000476395 MICU3Q86XE3 530 aa9.52□□□□□ -0.89
VAPB-205ENST00000476395 CMTR1Q8N1G2 835 aaKnown RBP9.52□□□□□ -0.89
VAPB-205ENST00000476395 PPM1EQ8WY54 764 aa9.52□□□□□ -0.89
VAPB-205ENST00000476395 PCDHB6Q9Y5E3 794 aa9.52□□□□□ -0.89
VAPB-205ENST00000476395 SOS2Q07890 1332 aaPredicted RBP9.52□□□□□ -0.89
VAPB-205ENST00000476395 WTIPA6NIX2 430 aaPredicted RBP9.52□□□□□ -0.89
VAPB-205ENST00000476395 SERPINC1P01008 464 aa9.52□□□□□ -0.89
VAPB-205ENST00000476395 MMP1P03956 469 aa9.52□□□□□ -0.89
VAPB-205ENST00000476395 MCTP2Q6DN12 878 aa9.52□□□□□ -0.89
VAPB-205ENST00000476395 GOLGA1Q92805 767 aa9.52□□□□□ -0.89
VAPB-205ENST00000476395 KCNH3Q9ULD8 1083 aa9.52□□□□□ -0.89
VAPB-205ENST00000476395 BCL9O00512 1426 aa9.51□□□□□ -0.89
VAPB-205ENST00000476395 IVLP07476 585 aa9.51□□□□□ -0.89
VAPB-205ENST00000476395 SCP2P22307 547 aa9.51□□□□□ -0.89
VAPB-205ENST00000476395 LIFRP42702 1097 aa9.51□□□□□ -0.89
VAPB-205ENST00000476395 MNAT1P51948 309 aa9.51□□□□□ -0.89
VAPB-205ENST00000476395 CHMP4BP1P59074 171 aa9.51□□□□□ -0.89
VAPB-205ENST00000476395 EVX2Q03828 476 aa9.51□□□□□ -0.89
VAPB-205ENST00000476395 NR5A1Q13285 461 aa9.51□□□□□ -0.89
VAPB-205ENST00000476395 TADA2BQ86TJ2 420 aa9.51□□□□□ -0.89
VAPB-205ENST00000476395 RABGGTAQ92696 567 aa9.51□□□□□ -0.89
VAPB-205ENST00000476395 SGSM3Q96HU1 749 aa9.51□□□□□ -0.89
VAPB-205ENST00000476395 KCNJ14Q9UNX9 436 aa9.51□□□□□ -0.89
VAPB-205ENST00000476395 PTPREP23469 700 aa9.51□□□□□ -0.89
VAPB-205ENST00000476395 IFIT5Q13325 482 aaKnown RBP9.51□□□□□ -0.89
VAPB-205ENST00000476395 RASGRF1Q13972 1273 aa9.51□□□□□ -0.89
VAPB-205ENST00000476395 NR1I3Q14994 352 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms