RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 TLR2O60603 784 aa19.34■□□□□ 0.69
SRM-204ENST00000475189 FKTNO75072 461 aa19.34■□□□□ 0.69
SRM-204ENST00000475189 FGAP02671 866 aa19.34■□□□□ 0.69
SRM-204ENST00000475189 RASA1P20936 1047 aa19.34■□□□□ 0.69
SRM-204ENST00000475189 PPARAQ07869 468 aa19.34■□□□□ 0.69
SRM-204ENST00000475189 ACER1Q8TDN7 264 aa19.34■□□□□ 0.69
SRM-204ENST00000475189 MKNK2Q9HBH9 465 aa19.34■□□□□ 0.69
SRM-204ENST00000475189 CHMLP26374 656 aa19.33■□□□□ 0.68
SRM-204ENST00000475189 IL25Q9H293 177 aa19.33■□□□□ 0.68
SRM-204ENST00000475189 EMILIN3Q9NT22 766 aa19.33■□□□□ 0.68
SRM-204ENST00000475189 PPP4R2Q9NY27 417 aa19.33■□□□□ 0.68
SRM-204ENST00000475189 ZMYM6O95789 1325 aa19.32■□□□□ 0.68
SRM-204ENST00000475189 ADGRA2Q96PE1 1338 aa19.32■□□□□ 0.68
SRM-204ENST00000475189 PRDM1O75626 825 aa19.32■□□□□ 0.68
SRM-204ENST00000475189 CYP2C8P10632 490 aa19.32■□□□□ 0.68
SRM-204ENST00000475189 KCNA4P22459 653 aa19.32■□□□□ 0.68
SRM-204ENST00000475189 CTDSPL2Q05D32 466 aa19.32■□□□□ 0.68
SRM-204ENST00000475189 USP17L2Q6R6M4 530 aa19.32■□□□□ 0.68
SRM-204ENST00000475189 PARK7Q99497 189 aaKnown RBP19.32■□□□□ 0.68
SRM-204ENST00000475189 TMOD4Q9NZQ9 345 aa19.32■□□□□ 0.68
SRM-204ENST00000475189 ANAPC4Q9UJX5 808 aa19.32■□□□□ 0.68
SRM-204ENST00000475189 A0A1W2PRG0 241 aa19.31■□□□□ 0.68
SRM-204ENST00000475189 SLC3A2P08195 630 aaKnown RBP19.31■□□□□ 0.68
SRM-204ENST00000475189 ZYXQ15942 572 aaKnown RBP19.31■□□□□ 0.68
SRM-204ENST00000475189 C17orf99Q6UX52 265 aa19.31■□□□□ 0.68
SRM-204ENST00000475189 CLEC10AQ8IUN9 316 aa19.31■□□□□ 0.68
SRM-204ENST00000475189 SIAH1Q8IUQ4 282 aa19.31■□□□□ 0.68
SRM-204ENST00000475189 FEZ1Q99689 392 aa19.31■□□□□ 0.68
SRM-204ENST00000475189 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.31■□□□□ 0.68
SRM-204ENST00000475189 KIAA1683Q9H0B3 1180 aa19.31■□□□□ 0.68
SRM-204ENST00000475189 ZNF287Q9HBT7 754 aa19.31■□□□□ 0.68
SRM-204ENST00000475189 TACC3Q9Y6A5 838 aa19.31■□□□□ 0.68
SRM-204ENST00000475189 MYH4Q9Y623 1939 aa19.3■□□□□ 0.68
SRM-204ENST00000475189 USP14P54578 494 aa19.3■□□□□ 0.68
SRM-204ENST00000475189 SP3Q02447 781 aa19.3■□□□□ 0.68
SRM-204ENST00000475189 PDE4BQ07343 736 aa19.3■□□□□ 0.68
SRM-204ENST00000475189 C12orf42Q96LP6 360 aa19.3■□□□□ 0.68
SRM-204ENST00000475189 CPA4Q9UI42 421 aa19.3■□□□□ 0.68
SRM-204ENST00000475189 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.3■□□□□ 0.68
SRM-204ENST00000475189 LAMA4Q16363 1823 aa19.3■□□□□ 0.68
SRM-204ENST00000475189 RAD50Q92878 1312 aa19.29■□□□□ 0.68
SRM-204ENST00000475189 HOXA7P31268 230 aaPredicted RBP19.29■□□□□ 0.68
SRM-204ENST00000475189 ICA1Q05084 483 aa19.29■□□□□ 0.68
SRM-204ENST00000475189 PABPC4Q13310 644 aaKnown RBP eCLIP19.29■□□□□ 0.682e-18■□□□□ 9.9
SRM-204ENST00000475189 ZNF444Q8N0Y2 327 aaPredicted RBP19.29■□□□□ 0.68
SRM-204ENST00000475189 RUFY2Q8WXA3 655 aa19.29■□□□□ 0.68
SRM-204ENST00000475189 DSCC1Q9BVC3 393 aa19.29■□□□□ 0.68
SRM-204ENST00000475189 KANSL2Q9H9L4 492 aa19.29■□□□□ 0.68
SRM-204ENST00000475189 INCENPQ9NQS7 918 aa19.29■□□□□ 0.68
SRM-204ENST00000475189 PNMA3Q9UL41 463 aa19.29■□□□□ 0.68
SRM-204ENST00000475189 ZSWIM8A7E2V4 1837 aa19.28■□□□□ 0.68
SRM-204ENST00000475189 BMP2KLQ5H9B9 411 aa19.28■□□□□ 0.68
SRM-204ENST00000475189 CTU1Q7Z7A3 348 aaKnown RBP19.28■□□□□ 0.68
SRM-204ENST00000475189 CD99L2Q8TCZ2 262 aa19.28■□□□□ 0.68
SRM-204ENST00000475189 ERO1AQ96HE7 468 aa19.28■□□□□ 0.68
SRM-204ENST00000475189 ASCC2Q9H1I8 757 aaPredicted RBP19.28■□□□□ 0.68
SRM-204ENST00000475189 ARHGEF10LQ9HCE6 1279 aa19.28■□□□□ 0.68
SRM-204ENST00000475189 IGKV6D-41A0A0C4DH26 115 aa19.27■□□□□ 0.68
SRM-204ENST00000475189 FGRP09769 529 aa19.27■□□□□ 0.68
SRM-204ENST00000475189 BCRP11274 1271 aa19.27■□□□□ 0.68
SRM-204ENST00000475189 EEF2P13639 858 aaKnown RBP19.27■□□□□ 0.68
SRM-204ENST00000475189 OSBPP22059 807 aa19.27■□□□□ 0.68
SRM-204ENST00000475189 HAND2P61296 217 aa19.27■□□□□ 0.68
SRM-204ENST00000475189 CAP1Q01518 475 aa19.27■□□□□ 0.68
SRM-204ENST00000475189 NEDD1Q8NHV4 660 aa19.27■□□□□ 0.68
SRM-204ENST00000475189 TMX2Q9Y320 296 aa19.27■□□□□ 0.68
SRM-204ENST00000475189 MGAMO43451 1857 aa19.26■□□□□ 0.67
SRM-204ENST00000475189 SGSM2O43147 1006 aa19.26■□□□□ 0.67
SRM-204ENST00000475189 ORC4O43929 436 aa19.26■□□□□ 0.67
SRM-204ENST00000475189 VCAM1P19320 739 aa19.26■□□□□ 0.67
SRM-204ENST00000475189 TFAP4Q01664 338 aa19.26■□□□□ 0.67
SRM-204ENST00000475189 FAM47AQ5JRC9 791 aa19.26■□□□□ 0.67
SRM-204ENST00000475189 KIAA1755Q5JYT7 1200 aa19.26■□□□□ 0.67
SRM-204ENST00000475189 SMCR8Q8TEV9 937 aaPredicted RBP19.26■□□□□ 0.67
SRM-204ENST00000475189 P2RX7Q99572 595 aaKnown RBP19.26■□□□□ 0.67
SRM-204ENST00000475189 MCOLN1Q9GZU1 580 aa19.26■□□□□ 0.67
SRM-204ENST00000475189 NBPF3Q9H094 633 aa19.26■□□□□ 0.67
SRM-204ENST00000475189 PLIN4Q96Q06 1357 aa19.26■□□□□ 0.67
SRM-204ENST00000475189 TSPY3P0CV98 308 aa19.25■□□□□ 0.67
SRM-204ENST00000475189 TSPY8P0CW00 308 aa19.25■□□□□ 0.67
SRM-204ENST00000475189 IRX3P78415 501 aaPredicted RBP19.25■□□□□ 0.67
SRM-204ENST00000475189 ATP2B2Q01814 1243 aa19.25■□□□□ 0.67
SRM-204ENST00000475189 SH2D4AQ9H788 454 aa19.25■□□□□ 0.67
SRM-204ENST00000475189 NYAP2Q9P242 653 aa19.25■□□□□ 0.67
SRM-204ENST00000475189 RLFQ13129 1914 aa19.24■□□□□ 0.67
SRM-204ENST00000475189 USP17L15C9J2P7 530 aa19.24■□□□□ 0.67
SRM-204ENST00000475189 USP17L13C9JLJ4 530 aa19.24■□□□□ 0.67
SRM-204ENST00000475189 USP17L11C9JVI0 530 aa19.24■□□□□ 0.67
SRM-204ENST00000475189 USP17L18D6R9N7 530 aa19.24■□□□□ 0.67
SRM-204ENST00000475189 USP17L22D6RA61 530 aa19.24■□□□□ 0.67
SRM-204ENST00000475189 USP17L17D6RBQ6 530 aa19.24■□□□□ 0.67
SRM-204ENST00000475189 USP17L19D6RCP7 530 aa19.24■□□□□ 0.67
SRM-204ENST00000475189 USP17L20D6RJB6 530 aa19.24■□□□□ 0.67
SRM-204ENST00000475189 LACTBP83111 547 aaPredicted RBP19.24■□□□□ 0.67
SRM-204ENST00000475189 USP17L24Q0WX57 530 aa19.24■□□□□ 0.67
SRM-204ENST00000475189 CATSPERGQ6ZRH7 1159 aa19.24■□□□□ 0.67
SRM-204ENST00000475189 OTOP1Q7RTM1 612 aa19.24■□□□□ 0.67
SRM-204ENST00000475189 CEP95Q96GE4 821 aa19.24■□□□□ 0.67
SRM-204ENST00000475189 VCPKMTQ9H867 229 aa19.24■□□□□ 0.67
SRM-204ENST00000475189 MTMR4Q9NYA4 1195 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms