RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 C12orf42Q96LP6 360 aa19.5■□□□□ 0.71
ITGB1-211ENST00000475184 FEZ1Q99689 392 aa19.5■□□□□ 0.71
ITGB1-211ENST00000475184 PRKAG2Q9UGJ0 569 aa19.5■□□□□ 0.71
ITGB1-211ENST00000475184 ZNF236Q9UL36 1845 aa19.49■□□□□ 0.71
ITGB1-211ENST00000475184 SLC15A5A6NIM6 579 aa19.49■□□□□ 0.71
ITGB1-211ENST00000475184 USP17L15C9J2P7 530 aa19.49■□□□□ 0.71
ITGB1-211ENST00000475184 USP17L13C9JLJ4 530 aa19.49■□□□□ 0.71
ITGB1-211ENST00000475184 USP17L11C9JVI0 530 aa19.49■□□□□ 0.71
ITGB1-211ENST00000475184 USP17L18D6R9N7 530 aa19.49■□□□□ 0.71
ITGB1-211ENST00000475184 USP17L22D6RA61 530 aa19.49■□□□□ 0.71
ITGB1-211ENST00000475184 USP17L17D6RBQ6 530 aa19.49■□□□□ 0.71
ITGB1-211ENST00000475184 USP17L19D6RCP7 530 aa19.49■□□□□ 0.71
ITGB1-211ENST00000475184 USP17L20D6RJB6 530 aa19.49■□□□□ 0.71
ITGB1-211ENST00000475184 DNM1LO00429 736 aa19.49■□□□□ 0.71
ITGB1-211ENST00000475184 USP17L24Q0WX57 530 aa19.49■□□□□ 0.71
ITGB1-211ENST00000475184 ZYXQ15942 572 aaKnown RBP19.49■□□□□ 0.71
ITGB1-211ENST00000475184 PNMA6EA0A0J9YXQ4 647 aa19.48■□□□□ 0.71
ITGB1-211ENST00000475184 HOXC6P09630 235 aa19.48■□□□□ 0.71
ITGB1-211ENST00000475184 PTPREP23469 700 aa19.48■□□□□ 0.71
ITGB1-211ENST00000475184 CNGA1P29973 690 aa19.48■□□□□ 0.71
ITGB1-211ENST00000475184 RTP1P59025 263 aa19.48■□□□□ 0.71
ITGB1-211ENST00000475184 ATP2B2Q01814 1243 aa19.48■□□□□ 0.71
ITGB1-211ENST00000475184 TTC39AQ5SRH9 613 aa19.48■□□□□ 0.71
ITGB1-211ENST00000475184 ARHGAP45Q92619 1136 aa19.48■□□□□ 0.71
ITGB1-211ENST00000475184 IVNS1ABPQ9Y6Y0 642 aa19.48■□□□□ 0.71
ITGB1-211ENST00000475184 ZNFX1Q9P2E3 1918 aaKnown RBP19.47■□□□□ 0.71
ITGB1-211ENST00000475184 GNAI2P04899 355 aa19.47■□□□□ 0.71
ITGB1-211ENST00000475184 CYP2E1P05181 493 aaPredicted RBP19.47■□□□□ 0.71
ITGB1-211ENST00000475184 GRB14Q14449 540 aa19.47■□□□□ 0.71
ITGB1-211ENST00000475184 SMCHD1A6NHR9 2005 aa19.47■□□□□ 0.71
ITGB1-211ENST00000475184 VCAM1P19320 739 aa19.46■□□□□ 0.71
ITGB1-211ENST00000475184 CYP2C19P33261 490 aa19.46■□□□□ 0.71
ITGB1-211ENST00000475184 RARSP54136 660 aaKnown RBP19.46■□□□□ 0.71
ITGB1-211ENST00000475184 USP14P54578 494 aa19.46■□□□□ 0.71
ITGB1-211ENST00000475184 CCDC158Q5M9N0 1113 aa19.46■□□□□ 0.71
ITGB1-211ENST00000475184 LBX2Q6XYB7 198 aa19.46■□□□□ 0.71
ITGB1-211ENST00000475184 CATSPERGQ6ZRH7 1159 aa19.46■□□□□ 0.71
ITGB1-211ENST00000475184 DBNDD2Q9BQY9 259 aa19.46■□□□□ 0.71
ITGB1-211ENST00000475184 MYH8P13535 1937 aa19.45■□□□□ 0.7
ITGB1-211ENST00000475184 ZNF316A6NFI3 1004 aaPredicted RBP19.45■□□□□ 0.7
ITGB1-211ENST00000475184 IGSF3O75054 1194 aa19.45■□□□□ 0.7
ITGB1-211ENST00000475184 DYNLL1P63167 89 aaKnown RBP19.45■□□□□ 0.7
ITGB1-211ENST00000475184 RAB3GAP1Q15042 981 aa19.45■□□□□ 0.7
ITGB1-211ENST00000475184 TNNI3KQ59H18 835 aa19.45■□□□□ 0.7
ITGB1-211ENST00000475184 TATDN1Q6P1N9 297 aa19.45■□□□□ 0.7
ITGB1-211ENST00000475184 TRPV1Q8NER1 839 aa19.45■□□□□ 0.7
ITGB1-211ENST00000475184 NPLOC4Q8TAT6 608 aa19.45■□□□□ 0.7
ITGB1-211ENST00000475184 CDX2Q99626 313 aaPredicted RBP19.45■□□□□ 0.7
ITGB1-211ENST00000475184 KIAA1683Q9H0B3 1180 aa19.45■□□□□ 0.7
ITGB1-211ENST00000475184 GPR108Q9NPR9 543 aa19.45■□□□□ 0.7
ITGB1-211ENST00000475184 BTBD7Q9P203 1132 aa19.45■□□□□ 0.7
ITGB1-211ENST00000475184 ATP11BQ9Y2G3 1177 aa19.45■□□□□ 0.7
ITGB1-211ENST00000475184 FPGT-TNNI3KV9GXZ4 949 aa19.45■□□□□ 0.7
ITGB1-211ENST00000475184 NAV1Q8NEY1 1877 aa19.45■□□□□ 0.7
ITGB1-211ENST00000475184 MYO9BQ13459 2157 aa19.44■□□□□ 0.7
ITGB1-211ENST00000475184 CYBAP13498 195 aa19.44■□□□□ 0.7
ITGB1-211ENST00000475184 PIH1D3Q9NQM4 214 aaKnown RBP19.44■□□□□ 0.7
ITGB1-211ENST00000475184 SERPINB13Q9UIV8 391 aa19.44■□□□□ 0.7
ITGB1-211ENST00000475184 A0A0G2JMZ2 1700 aa19.44■□□□□ 0.7
ITGB1-211ENST00000475184 SPDYE16A6NNV3 312 aaPredicted RBP19.43■□□□□ 0.7
ITGB1-211ENST00000475184 IGHA2P01877 340 aa19.43■□□□□ 0.7
ITGB1-211ENST00000475184 CYP7A1P22680 504 aa19.43■□□□□ 0.7
ITGB1-211ENST00000475184 ZAP70P43403 619 aa19.43■□□□□ 0.7
ITGB1-211ENST00000475184 SHHQ15465 462 aa19.43■□□□□ 0.7
ITGB1-211ENST00000475184 GJC2Q5T442 439 aaPredicted RBP19.43■□□□□ 0.7
ITGB1-211ENST00000475184 ARRDC4Q8NCT1 418 aa19.43■□□□□ 0.7
ITGB1-211ENST00000475184 MAFAQ8NHW3 353 aaPredicted RBP19.43■□□□□ 0.7
ITGB1-211ENST00000475184 ACER1Q8TDN7 264 aa19.43■□□□□ 0.7
ITGB1-211ENST00000475184 ZNF512BQ96KM6 892 aaPredicted RBP19.43■□□□□ 0.7
ITGB1-211ENST00000475184 EHD4Q9H223 541 aa19.43■□□□□ 0.7
ITGB1-211ENST00000475184 MUC3AQ02505 3323 aa19.42■□□□□ 0.7
ITGB1-211ENST00000475184 NCOR1O75376 2440 aa19.42■□□□□ 0.7
ITGB1-211ENST00000475184 USP5P45974 858 aa19.42■□□□□ 0.7
ITGB1-211ENST00000475184 ABCB5Q2M3G0 1257 aa19.42■□□□□ 0.7
ITGB1-211ENST00000475184 CERKLQ49MI3 558 aaPredicted RBP19.42■□□□□ 0.7
ITGB1-211ENST00000475184 C9orf50Q5SZB4 431 aa19.42■□□□□ 0.7
ITGB1-211ENST00000475184 CERS3Q8IU89 383 aa19.42■□□□□ 0.7
ITGB1-211ENST00000475184 MIGA1Q8NAN2 632 aa19.42■□□□□ 0.7
ITGB1-211ENST00000475184 SEMA6BQ9H3T3 888 aa19.42■□□□□ 0.7
ITGB1-211ENST00000475184 RPAP3Q9H6T3 665 aaPredicted RBP19.42■□□□□ 0.7
ITGB1-211ENST00000475184 PRDM5Q9NQX1 630 aaPredicted RBP19.42■□□□□ 0.7
ITGB1-211ENST00000475184 PARP14Q460N5 1801 aa19.41■□□□□ 0.7
ITGB1-211ENST00000475184 KBTBD13C9JR72 458 aa19.41■□□□□ 0.7
ITGB1-211ENST00000475184 TRIM27P14373 513 aa19.41■□□□□ 0.7
ITGB1-211ENST00000475184 OS9Q13438 667 aaPredicted RBP19.41■□□□□ 0.7
ITGB1-211ENST00000475184 OLFML2BQ68BL8 750 aa19.41■□□□□ 0.7
ITGB1-211ENST00000475184 SLC39A5Q6ZMH5 540 aa19.41■□□□□ 0.7
ITGB1-211ENST00000475184 PLXNA1Q9UIW2 1896 aa19.4■□□□□ 0.7
ITGB1-211ENST00000475184 IDH1O75874 414 aaKnown RBP19.4■□□□□ 0.7
ITGB1-211ENST00000475184 ADORA2AP29274 412 aa19.4■□□□□ 0.7
ITGB1-211ENST00000475184 ANO1Q5XXA6 986 aa19.4■□□□□ 0.7
ITGB1-211ENST00000475184 DPP9Q86TI2 863 aa19.4■□□□□ 0.7
ITGB1-211ENST00000475184 BADQ92934 168 aa19.4■□□□□ 0.7
ITGB1-211ENST00000475184 CABP5Q9NP86 173 aa19.4■□□□□ 0.7
ITGB1-211ENST00000475184 COL11A1P12107 1806 aaPredicted RBP19.39■□□□□ 0.7
ITGB1-211ENST00000475184 IPO8O15397 1037 aaKnown RBP19.39■□□□□ 0.69
ITGB1-211ENST00000475184 STRNO43815 780 aa19.39■□□□□ 0.69
ITGB1-211ENST00000475184 SMAD3P84022 425 aaKnown RBP19.39■□□□□ 0.69
ITGB1-211ENST00000475184 SNX17Q15036 470 aa19.39■□□□□ 0.69
ITGB1-211ENST00000475184 TRIM60Q495X7 471 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms