RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 DHX36Q9H2U1 1008 aaKnown RBP7.77□□□□□ -1.17
ATG4A-207ENST00000474825 ZNF287Q9HBT7 754 aa7.77□□□□□ -1.17
ATG4A-207ENST00000474825 HDAC9Q9UKV0 1011 aa7.77□□□□□ -1.17
ATG4A-207ENST00000474825 ZDHHC9Q9Y397 364 aa7.77□□□□□ -1.17
ATG4A-207ENST00000474825 UTRNP46939 3433 aa7.77□□□□□ -1.17
ATG4A-207ENST00000474825 FOCADQ5VW36 1801 aa7.76□□□□□ -1.17
ATG4A-207ENST00000474825 IGKV6D-41A0A0C4DH26 115 aa7.76□□□□□ -1.17
ATG4A-207ENST00000474825 STK25O00506 426 aa7.76□□□□□ -1.17
ATG4A-207ENST00000474825 IFIT3O14879 490 aaKnown RBP7.76□□□□□ -1.17
ATG4A-207ENST00000474825 POLR3DP05423 398 aaPredicted RBP7.76□□□□□ -1.17
ATG4A-207ENST00000474825 HSP90AA1P07900 732 aaKnown RBP7.76□□□□□ -1.17
ATG4A-207ENST00000474825 LMNB1P20700 586 aa7.76□□□□□ -1.17
ATG4A-207ENST00000474825 RASA1P20936 1047 aa7.76□□□□□ -1.17
ATG4A-207ENST00000474825 CDK8P49336 464 aa7.76□□□□□ -1.17
ATG4A-207ENST00000474825 MAP3K10Q02779 954 aa7.76□□□□□ -1.17
ATG4A-207ENST00000474825 RASSF7Q02833 373 aa7.76□□□□□ -1.17
ATG4A-207ENST00000474825 NFIAQ12857 509 aa7.76□□□□□ -1.17
ATG4A-207ENST00000474825 SART3Q15020 963 aaKnown RBP7.76□□□□□ -1.17
ATG4A-207ENST00000474825 NTRK3Q16288 839 aa7.76□□□□□ -1.17
ATG4A-207ENST00000474825 TMEM67Q5HYA8 995 aa7.76□□□□□ -1.17
ATG4A-207ENST00000474825 RCSD1Q6JBY9 416 aa7.76□□□□□ -1.17
ATG4A-207ENST00000474825 SH3BP5LQ7L8J4 393 aa7.76□□□□□ -1.17
ATG4A-207ENST00000474825 FAM83AQ86UY5 434 aa7.76□□□□□ -1.17
ATG4A-207ENST00000474825 IQCA1Q86XH1 822 aa7.76□□□□□ -1.17
ATG4A-207ENST00000474825 DGKHQ86XP1 1220 aa7.76□□□□□ -1.17
ATG4A-207ENST00000474825 FOXP4Q8IVH2 680 aaPredicted RBP7.76□□□□□ -1.17
ATG4A-207ENST00000474825 OGFOD1Q8N543 542 aa7.76□□□□□ -1.17
ATG4A-207ENST00000474825 ENAHQ8N8S7 591 aaPredicted RBP7.76□□□□□ -1.17
ATG4A-207ENST00000474825 SPRYD3Q8NCJ5 442 aa7.76□□□□□ -1.17
ATG4A-207ENST00000474825 NSUN7Q8NE18 718 aaKnown RBP7.76□□□□□ -1.17
ATG4A-207ENST00000474825 NEDD1Q8NHV4 660 aa7.76□□□□□ -1.17
ATG4A-207ENST00000474825 ZSCAN10Q96SZ4 725 aaPredicted RBP7.76□□□□□ -1.17
ATG4A-207ENST00000474825 KCNK17Q96T54 332 aa7.76□□□□□ -1.17
ATG4A-207ENST00000474825 MAP3K14Q99558 947 aa7.76□□□□□ -1.17
ATG4A-207ENST00000474825 SENP2Q9HC62 589 aa7.76□□□□□ -1.17
ATG4A-207ENST00000474825 FAM217BQ9NTX9 383 aaPredicted RBP7.76□□□□□ -1.17
ATG4A-207ENST00000474825 SWAP70Q9UH65 585 aa7.76□□□□□ -1.17
ATG4A-207ENST00000474825 PGAP2Q9UHJ9 254 aa7.76□□□□□ -1.17
ATG4A-207ENST00000474825 PCDHAC2Q9Y5I4 1007 aa7.76□□□□□ -1.17
ATG4A-207ENST00000474825 LAMB1P07942 1786 aa7.75□□□□□ -1.17
ATG4A-207ENST00000474825 KLF18A0A0U1RQI7 1052 aa7.75□□□□□ -1.17
ATG4A-207ENST00000474825 DHX16O60231 1041 aaKnown RBP7.75□□□□□ -1.17
ATG4A-207ENST00000474825 SYT1P21579 422 aa7.75□□□□□ -1.17
ATG4A-207ENST00000474825 GJB2P29033 226 aa7.75□□□□□ -1.17
ATG4A-207ENST00000474825 HMGN5P82970 282 aaKnown RBP7.75□□□□□ -1.17
ATG4A-207ENST00000474825 FGD1P98174 961 aa7.75□□□□□ -1.17
ATG4A-207ENST00000474825 TROAPQ12815 778 aa7.75□□□□□ -1.17
ATG4A-207ENST00000474825 WTAPQ15007 396 aa7.75□□□□□ -1.17
ATG4A-207ENST00000474825 DLGAP5Q15398 846 aa7.75□□□□□ -1.17
ATG4A-207ENST00000474825 TATDN1Q6P1N9 297 aa7.75□□□□□ -1.17
ATG4A-207ENST00000474825 NOL8Q76FK4 1167 aaKnown RBP7.75□□□□□ -1.17
ATG4A-207ENST00000474825 ZFPM1Q8IX07 1006 aa7.75□□□□□ -1.17
ATG4A-207ENST00000474825 ZNF526Q8TF50 670 aaPredicted RBP7.75□□□□□ -1.17
ATG4A-207ENST00000474825 FAM151AQ8WW52 585 aa7.75□□□□□ -1.17
ATG4A-207ENST00000474825 DYNLL2Q96FJ2 89 aa7.75□□□□□ -1.17
ATG4A-207ENST00000474825 UBAC1Q9BSL1 405 aa7.75□□□□□ -1.17
ATG4A-207ENST00000474825 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.75□□□□□ -1.17
ATG4A-207ENST00000474825 IL17RBQ9NRM6 502 aa7.75□□□□□ -1.17
ATG4A-207ENST00000474825 PI4KBQ9UBF8 816 aa7.75□□□□□ -1.17
ATG4A-207ENST00000474825 SAP30BPQ9UHR5 308 aaKnown RBP7.75□□□□□ -1.17
ATG4A-207ENST00000474825 SERPINB13Q9UIV8 391 aa7.75□□□□□ -1.17
ATG4A-207ENST00000474825 SMC3Q9UQE7 1217 aa7.75□□□□□ -1.17
ATG4A-207ENST00000474825 TNKSO95271 1327 aa7.75□□□□□ -1.17
ATG4A-207ENST00000474825 CDK5RAP2Q96SN8 1893 aa7.75□□□□□ -1.17
ATG4A-207ENST00000474825 BAZ2AQ9UIF9 1905 aaKnown RBP7.74□□□□□ -1.17
ATG4A-207ENST00000474825 ERICH2A1L162 156 aa7.74□□□□□ -1.17
ATG4A-207ENST00000474825 DDTLA6NHG4 134 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-207ENST00000474825 WNT10BO00744 389 aa7.74□□□□□ -1.17
ATG4A-207ENST00000474825 ZBTB43O43298 467 aa7.74□□□□□ -1.17
ATG4A-207ENST00000474825 TBC1D12O60347 775 aa7.74□□□□□ -1.17
ATG4A-207ENST00000474825 RANBP6O60518 1105 aaKnown RBP7.74□□□□□ -1.17
ATG4A-207ENST00000474825 PRDM1O75626 825 aa7.74□□□□□ -1.17
ATG4A-207ENST00000474825 DDAH1O94760 285 aa7.74□□□□□ -1.17
ATG4A-207ENST00000474825 FDPSP14324 419 aaKnown RBP7.74□□□□□ -1.17
ATG4A-207ENST00000474825 IFNAR1P17181 557 aa7.74□□□□□ -1.17
ATG4A-207ENST00000474825 PDCP20941 246 aa7.74□□□□□ -1.17
ATG4A-207ENST00000474825 SHMT1P34896 483 aa7.74□□□□□ -1.17
ATG4A-207ENST00000474825 EIF6P56537 245 aaKnown RBP7.74□□□□□ -1.17
ATG4A-207ENST00000474825 FOXK1P85037 733 aa7.74□□□□□ -1.17
ATG4A-207ENST00000474825 TFAP4Q01664 338 aa7.74□□□□□ -1.17
ATG4A-207ENST00000474825 FUT2Q10981 343 aa7.74□□□□□ -1.17
ATG4A-207ENST00000474825 PKP1Q13835 747 aa7.74□□□□□ -1.17
ATG4A-207ENST00000474825 RRP12Q5JTH9 1297 aaKnown RBP7.74□□□□□ -1.17
ATG4A-207ENST00000474825 ZNF444Q8N0Y2 327 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-207ENST00000474825 GPC2Q8N158 579 aa7.74□□□□□ -1.17
ATG4A-207ENST00000474825 TNPO1Q92973 898 aaKnown RBP7.74□□□□□ -1.17
ATG4A-207ENST00000474825 CCDC17Q96LX7 622 aa7.74□□□□□ -1.17
ATG4A-207ENST00000474825 TDRD3Q9H7E2 651 aaKnown RBP7.74□□□□□ -1.17
ATG4A-207ENST00000474825 DNAJC18Q9H819 358 aa7.74□□□□□ -1.17
ATG4A-207ENST00000474825 MKNK2Q9HBH9 465 aa7.74□□□□□ -1.17
ATG4A-207ENST00000474825 MYOZ2Q9NPC6 264 aa7.74□□□□□ -1.17
ATG4A-207ENST00000474825 ZNF70Q9UC06 446 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-207ENST00000474825 MTMR6Q9Y217 621 aa7.74□□□□□ -1.17
ATG4A-207ENST00000474825 SLC12A7Q9Y666 1083 aa7.74□□□□□ -1.17
ATG4A-207ENST00000474825 NAV1Q8NEY1 1877 aa7.74□□□□□ -1.17
ATG4A-207ENST00000474825 WDR33Q9C0J8 1336 aaKnown RBP7.74□□□□□ -1.17
ATG4A-207ENST00000474825 STK36Q9NRP7 1315 aa7.74□□□□□ -1.17
ATG4A-207ENST00000474825 CNTNAP1P78357 1384 aa7.73□□□□□ -1.17
ATG4A-207ENST00000474825 CCDC196A0A1B0GTZ2 297 aa7.73□□□□□ -1.17
ATG4A-207ENST00000474825 PTPDC1A2A3K4 754 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms