RNA–Protein interactions for RNA: ENST00000474475.1

TNFRSF9-202, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-202ENST00000474475 SHISA4Q96DD7 197 aa10.69□□□□□ -0.7
TNFRSF9-202ENST00000474475 DDX19BQ9UMR2 479 aa10.69□□□□□ -0.7
TNFRSF9-202ENST00000474475 DDX60LQ5H9U9 1706 aaKnown RBP10.68□□□□□ -0.7
TNFRSF9-202ENST00000474475 ADCY3O60266 1144 aa10.68□□□□□ -0.7
TNFRSF9-202ENST00000474475 HLA-DOAP06340 250 aa10.68□□□□□ -0.7
TNFRSF9-202ENST00000474475 CCL5P13501 91 aa10.68□□□□□ -0.7
TNFRSF9-202ENST00000474475 ELNP15502 786 aa10.68□□□□□ -0.7
TNFRSF9-202ENST00000474475 BACE1P56817 501 aa10.68□□□□□ -0.7
TNFRSF9-202ENST00000474475 MAP3K12Q12852 859 aa10.68□□□□□ -0.7
TNFRSF9-202ENST00000474475 PABPC4Q13310 644 aaKnown RBP eCLIP10.68□□□□□ -0.7
TNFRSF9-202ENST00000474475 DSG2Q14126 1118 aa10.68□□□□□ -0.7
TNFRSF9-202ENST00000474475 NBR1Q14596 966 aa10.68□□□□□ -0.7
TNFRSF9-202ENST00000474475 FAM110CQ1W6H9 321 aa10.68□□□□□ -0.7
TNFRSF9-202ENST00000474475 SLAIN1Q8ND83 568 aa10.68□□□□□ -0.7
TNFRSF9-202ENST00000474475 GCC1Q96CN9 775 aa10.68□□□□□ -0.7
TNFRSF9-202ENST00000474475 RIOK1Q9BRS2 568 aaKnown RBP10.68□□□□□ -0.7
TNFRSF9-202ENST00000474475 TRIM34Q9BYJ4 488 aa10.68□□□□□ -0.7
TNFRSF9-202ENST00000474475 ASCC2Q9H1I8 757 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF9-202ENST00000474475 RCAN3Q9UKA8 241 aa10.68□□□□□ -0.7
TNFRSF9-202ENST00000474475 ZBTB21Q9ULJ3 1066 aa10.68□□□□□ -0.7
TNFRSF9-202ENST00000474475 HMMRO75330 724 aa10.67□□□□□ -0.7
TNFRSF9-202ENST00000474475 GJB1P08034 283 aa10.67□□□□□ -0.7
TNFRSF9-202ENST00000474475 USP5P45974 858 aa10.67□□□□□ -0.7
TNFRSF9-202ENST00000474475 GJA8P48165 433 aa10.67□□□□□ -0.7
TNFRSF9-202ENST00000474475 GCLCP48506 637 aaPredicted RBP10.67□□□□□ -0.7
TNFRSF9-202ENST00000474475 UBXN2AP68543 259 aa10.67□□□□□ -0.7
TNFRSF9-202ENST00000474475 IRF5Q13568 498 aa10.67□□□□□ -0.7
TNFRSF9-202ENST00000474475 TATDN1Q6P1N9 297 aa10.67□□□□□ -0.7
TNFRSF9-202ENST00000474475 CERS3Q8IU89 383 aa10.67□□□□□ -0.7
TNFRSF9-202ENST00000474475 CLASRPQ8N2M8 674 aaKnown RBP10.67□□□□□ -0.7
TNFRSF9-202ENST00000474475 KIF1BPQ96EK5 621 aa10.67□□□□□ -0.7
TNFRSF9-202ENST00000474475 RNF208Q9H0X6 261 aa10.67□□□□□ -0.7
TNFRSF9-202ENST00000474475 UNC93B1Q9H1C4 597 aa10.67□□□□□ -0.7
TNFRSF9-202ENST00000474475 GINM1Q9NU53 330 aa10.67□□□□□ -0.7
TNFRSF9-202ENST00000474475 BIN2Q9UBW5 565 aaPredicted RBP10.67□□□□□ -0.7
TNFRSF9-202ENST00000474475 C19orf81C9J6K1 198 aa10.66□□□□□ -0.7
TNFRSF9-202ENST00000474475 USP17L10C9JJH3 530 aa10.66□□□□□ -0.7
TNFRSF9-202ENST00000474475 PEX10O60683 326 aa10.66□□□□□ -0.7
TNFRSF9-202ENST00000474475 GH2P01242 217 aa10.66□□□□□ -0.7
TNFRSF9-202ENST00000474475 INHAP05111 366 aa10.66□□□□□ -0.7
TNFRSF9-202ENST00000474475 PDE6AP16499 860 aa10.66□□□□□ -0.7
TNFRSF9-202ENST00000474475 HOXA7P31268 230 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF9-202ENST00000474475 TTF1Q15361 905 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF9-202ENST00000474475 C20orf194Q5TEA3 1177 aa10.66□□□□□ -0.7
TNFRSF9-202ENST00000474475 TMED8Q6PL24 325 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF9-202ENST00000474475 PLPP6Q8IY26 295 aa10.66□□□□□ -0.7
TNFRSF9-202ENST00000474475 PXYLP1Q8TE99 480 aa10.66□□□□□ -0.7
TNFRSF9-202ENST00000474475 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.66□□□□□ -0.7
TNFRSF9-202ENST00000474475 COA7Q96BR5 231 aa10.66□□□□□ -0.7
TNFRSF9-202ENST00000474475 P2RX7Q99572 595 aaKnown RBP10.66□□□□□ -0.7
TNFRSF9-202ENST00000474475 BCL11AQ9H165 835 aa10.66□□□□□ -0.7
TNFRSF9-202ENST00000474475 EHD4Q9H223 541 aa10.66□□□□□ -0.7
TNFRSF9-202ENST00000474475 TMOD4Q9NZQ9 345 aa10.66□□□□□ -0.7
TNFRSF9-202ENST00000474475 MORF4L1Q9UBU8 362 aa10.66□□□□□ -0.7
TNFRSF9-202ENST00000474475 SERPINB13Q9UIV8 391 aa10.66□□□□□ -0.7
TNFRSF9-202ENST00000474475 NAV1Q8NEY1 1877 aa10.66□□□□□ -0.7
TNFRSF9-202ENST00000474475 PLXNB2O15031 1838 aa10.65□□□□□ -0.7
TNFRSF9-202ENST00000474475 MAGEB6P1A0A0J9YX57 407 aa10.65□□□□□ -0.7
TNFRSF9-202ENST00000474475 TCRBV5S4A2TA0A5A2 114 aa10.65□□□□□ -0.7
TNFRSF9-202ENST00000474475 GOLIM4O00461 696 aa10.65□□□□□ -0.7
TNFRSF9-202ENST00000474475 RAB11FIP3O75154 756 aa10.65□□□□□ -0.7
TNFRSF9-202ENST00000474475 IFIT2P09913 472 aaKnown RBP10.65□□□□□ -0.7
TNFRSF9-202ENST00000474475 PLCD1P51178 756 aa10.65□□□□□ -0.7
TNFRSF9-202ENST00000474475 IRX3P78415 501 aaPredicted RBP10.65□□□□□ -0.7
TNFRSF9-202ENST00000474475 SLC9C2Q5TAH2 1124 aa10.65□□□□□ -0.7
TNFRSF9-202ENST00000474475 TMEM92Q6UXU6 159 aa10.65□□□□□ -0.7
TNFRSF9-202ENST00000474475 UBE2Q1Q7Z7E8 422 aa10.65□□□□□ -0.7
TNFRSF9-202ENST00000474475 TTC6Q86TZ1 520 aa10.65□□□□□ -0.7
TNFRSF9-202ENST00000474475 NKX2-3Q8TAU0 364 aa10.65□□□□□ -0.7
TNFRSF9-202ENST00000474475 KCNV2Q8TDN2 545 aa10.65□□□□□ -0.7
TNFRSF9-202ENST00000474475 U2AF1L4Q8WU68 220 aaKnown RBP10.65□□□□□ -0.7
TNFRSF9-202ENST00000474475 EDC3Q96F86 508 aaKnown RBP10.65□□□□□ -0.7
TNFRSF9-202ENST00000474475 DNAJC2Q99543 621 aaKnown RBP10.65□□□□□ -0.7
TNFRSF9-202ENST00000474475 TXNRD2Q9NNW7 524 aa10.65□□□□□ -0.7
TNFRSF9-202ENST00000474475 EMILIN3Q9NT22 766 aa10.65□□□□□ -0.7
TNFRSF9-202ENST00000474475 GJD2Q9UKL4 321 aa10.65□□□□□ -0.7
TNFRSF9-202ENST00000474475 DOCK3Q8IZD9 2030 aa10.65□□□□□ -0.71
TNFRSF9-202ENST00000474475 ZNF532Q9HCE3 1301 aa10.64□□□□□ -0.71
TNFRSF9-202ENST00000474475 SGPL1O95470 568 aa10.64□□□□□ -0.71
TNFRSF9-202ENST00000474475 SHMT1P34896 483 aa10.64□□□□□ -0.71
TNFRSF9-202ENST00000474475 HERVK_113P62684 666 aa10.64□□□□□ -0.71
TNFRSF9-202ENST00000474475 SLFNL1Q499Z3 407 aa10.64□□□□□ -0.71
TNFRSF9-202ENST00000474475 HABP4Q5JVS0 413 aaKnown RBP10.64□□□□□ -0.71
TNFRSF9-202ENST00000474475 USP17L2Q6R6M4 530 aa10.64□□□□□ -0.71
TNFRSF9-202ENST00000474475 POTEEQ6S8J3 1075 aa10.64□□□□□ -0.71
TNFRSF9-202ENST00000474475 LCORLQ8N3X6 602 aa10.64□□□□□ -0.71
TNFRSF9-202ENST00000474475 RBPJLQ9UBG7 517 aa10.64□□□□□ -0.71
TNFRSF9-202ENST00000474475 H0YGN5 161 aa10.63□□□□□ -0.71
TNFRSF9-202ENST00000474475 POTEB2H3BUK9 544 aa10.63□□□□□ -0.71
TNFRSF9-202ENST00000474475 ATP5JP18859 108 aa10.63□□□□□ -0.71
TNFRSF9-202ENST00000474475 GABPAQ06546 454 aa10.63□□□□□ -0.71
TNFRSF9-202ENST00000474475 PDE3AQ14432 1141 aa10.63□□□□□ -0.71
TNFRSF9-202ENST00000474475 RAB3GAP1Q15042 981 aa10.63□□□□□ -0.71
TNFRSF9-202ENST00000474475 ZYXQ15942 572 aaKnown RBP10.63□□□□□ -0.71
TNFRSF9-202ENST00000474475 ABCB5Q2M3G0 1257 aa10.63□□□□□ -0.71
TNFRSF9-202ENST00000474475 Q3C1V9 767 aa10.63□□□□□ -0.71
TNFRSF9-202ENST00000474475 CERKLQ49MI3 558 aaPredicted RBP10.63□□□□□ -0.71
TNFRSF9-202ENST00000474475 SDR42E1Q8WUS8 393 aa10.63□□□□□ -0.71
TNFRSF9-202ENST00000474475 C12orf42Q96LP6 360 aa10.63□□□□□ -0.71
TNFRSF9-202ENST00000474475 DEFB118Q96PH6 123 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms